GO Enrichment Analysis of Co-expressed Genes with
AT3G16080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070918: production of small RNA involved in gene silencing by RNA | 0.00E+00 |
| 2 | GO:1990569: UDP-N-acetylglucosamine transmembrane transport | 0.00E+00 |
| 3 | GO:0015789: UDP-N-acetylgalactosamine transport | 0.00E+00 |
| 4 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 5 | GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process | 0.00E+00 |
| 6 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 7 | GO:1903857: negative regulation of cytokinin dehydrogenase activity | 0.00E+00 |
| 8 | GO:0009264: deoxyribonucleotide catabolic process | 0.00E+00 |
| 9 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 10 | GO:0046487: glyoxylate metabolic process | 0.00E+00 |
| 11 | GO:0006412: translation | 2.41E-170 |
| 12 | GO:0042254: ribosome biogenesis | 1.86E-61 |
| 13 | GO:0000027: ribosomal large subunit assembly | 2.47E-14 |
| 14 | GO:0006626: protein targeting to mitochondrion | 1.92E-09 |
| 15 | GO:0000028: ribosomal small subunit assembly | 3.68E-07 |
| 16 | GO:0009735: response to cytokinin | 2.07E-06 |
| 17 | GO:0009967: positive regulation of signal transduction | 9.54E-06 |
| 18 | GO:0009955: adaxial/abaxial pattern specification | 9.96E-06 |
| 19 | GO:1902626: assembly of large subunit precursor of preribosome | 3.26E-05 |
| 20 | GO:0002181: cytoplasmic translation | 3.26E-05 |
| 21 | GO:0006820: anion transport | 1.18E-04 |
| 22 | GO:0042274: ribosomal small subunit biogenesis | 1.23E-04 |
| 23 | GO:0006364: rRNA processing | 1.63E-04 |
| 24 | GO:0045040: protein import into mitochondrial outer membrane | 2.68E-04 |
| 25 | GO:0030150: protein import into mitochondrial matrix | 2.73E-04 |
| 26 | GO:0006414: translational elongation | 3.50E-04 |
| 27 | GO:0000398: mRNA splicing, via spliceosome | 4.27E-04 |
| 28 | GO:0032365: intracellular lipid transport | 4.64E-04 |
| 29 | GO:0006407: rRNA export from nucleus | 4.64E-04 |
| 30 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 4.64E-04 |
| 31 | GO:0015801: aromatic amino acid transport | 4.64E-04 |
| 32 | GO:0030490: maturation of SSU-rRNA | 4.64E-04 |
| 33 | GO:0006434: seryl-tRNA aminoacylation | 4.64E-04 |
| 34 | GO:0000494: box C/D snoRNA 3'-end processing | 4.64E-04 |
| 35 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.64E-04 |
| 36 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.64E-04 |
| 37 | GO:1990258: histone glutamine methylation | 4.64E-04 |
| 38 | GO:0098656: anion transmembrane transport | 8.40E-04 |
| 39 | GO:0000387: spliceosomal snRNP assembly | 9.90E-04 |
| 40 | GO:0015786: UDP-glucose transport | 1.00E-03 |
| 41 | GO:0045905: positive regulation of translational termination | 1.00E-03 |
| 42 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 1.00E-03 |
| 43 | GO:0045901: positive regulation of translational elongation | 1.00E-03 |
| 44 | GO:0048569: post-embryonic animal organ development | 1.00E-03 |
| 45 | GO:0043981: histone H4-K5 acetylation | 1.00E-03 |
| 46 | GO:0006452: translational frameshifting | 1.00E-03 |
| 47 | GO:0051788: response to misfolded protein | 1.00E-03 |
| 48 | GO:0009150: purine ribonucleotide metabolic process | 1.63E-03 |
| 49 | GO:0015783: GDP-fucose transport | 1.63E-03 |
| 50 | GO:0010476: gibberellin mediated signaling pathway | 1.63E-03 |
| 51 | GO:0042256: mature ribosome assembly | 1.63E-03 |
| 52 | GO:0070301: cellular response to hydrogen peroxide | 2.37E-03 |
| 53 | GO:0006241: CTP biosynthetic process | 2.37E-03 |
| 54 | GO:0072334: UDP-galactose transmembrane transport | 2.37E-03 |
| 55 | GO:0006165: nucleoside diphosphate phosphorylation | 2.37E-03 |
| 56 | GO:0006228: UTP biosynthetic process | 2.37E-03 |
| 57 | GO:0006164: purine nucleotide biosynthetic process | 2.37E-03 |
| 58 | GO:0009647: skotomorphogenesis | 2.37E-03 |
| 59 | GO:0009651: response to salt stress | 3.14E-03 |
| 60 | GO:0009165: nucleotide biosynthetic process | 3.18E-03 |
| 61 | GO:0006183: GTP biosynthetic process | 3.18E-03 |
| 62 | GO:0010363: regulation of plant-type hypersensitive response | 3.18E-03 |
| 63 | GO:0040007: growth | 3.92E-03 |
| 64 | GO:0071215: cellular response to abscisic acid stimulus | 3.92E-03 |
| 65 | GO:1902183: regulation of shoot apical meristem development | 4.08E-03 |
| 66 | GO:0031167: rRNA methylation | 4.08E-03 |
| 67 | GO:0009409: response to cold | 4.81E-03 |
| 68 | GO:0000470: maturation of LSU-rRNA | 5.05E-03 |
| 69 | GO:0043248: proteasome assembly | 5.05E-03 |
| 70 | GO:0000245: spliceosomal complex assembly | 6.09E-03 |
| 71 | GO:0009648: photoperiodism | 6.09E-03 |
| 72 | GO:0009793: embryo development ending in seed dormancy | 6.84E-03 |
| 73 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 7.20E-03 |
| 74 | GO:0048528: post-embryonic root development | 7.20E-03 |
| 75 | GO:0031540: regulation of anthocyanin biosynthetic process | 8.39E-03 |
| 76 | GO:0044030: regulation of DNA methylation | 9.63E-03 |
| 77 | GO:0001510: RNA methylation | 9.63E-03 |
| 78 | GO:0001558: regulation of cell growth | 9.63E-03 |
| 79 | GO:0006189: 'de novo' IMP biosynthetic process | 1.09E-02 |
| 80 | GO:0009060: aerobic respiration | 1.09E-02 |
| 81 | GO:0015780: nucleotide-sugar transport | 1.09E-02 |
| 82 | GO:0009245: lipid A biosynthetic process | 1.09E-02 |
| 83 | GO:0009845: seed germination | 1.25E-02 |
| 84 | GO:0010015: root morphogenesis | 1.52E-02 |
| 85 | GO:0006913: nucleocytoplasmic transport | 1.52E-02 |
| 86 | GO:0015770: sucrose transport | 1.52E-02 |
| 87 | GO:0006413: translational initiation | 1.56E-02 |
| 88 | GO:0006790: sulfur compound metabolic process | 1.68E-02 |
| 89 | GO:0012501: programmed cell death | 1.68E-02 |
| 90 | GO:2000028: regulation of photoperiodism, flowering | 1.84E-02 |
| 91 | GO:0010102: lateral root morphogenesis | 1.84E-02 |
| 92 | GO:0006446: regulation of translational initiation | 2.00E-02 |
| 93 | GO:0048467: gynoecium development | 2.00E-02 |
| 94 | GO:0008283: cell proliferation | 2.08E-02 |
| 95 | GO:0009617: response to bacterium | 2.14E-02 |
| 96 | GO:0009644: response to high light intensity | 2.25E-02 |
| 97 | GO:0009965: leaf morphogenesis | 2.34E-02 |
| 98 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.52E-02 |
| 99 | GO:0006289: nucleotide-excision repair | 2.53E-02 |
| 100 | GO:0009116: nucleoside metabolic process | 2.53E-02 |
| 101 | GO:0051302: regulation of cell division | 2.71E-02 |
| 102 | GO:0003333: amino acid transmembrane transport | 2.90E-02 |
| 103 | GO:0015992: proton transport | 2.90E-02 |
| 104 | GO:0051260: protein homooligomerization | 2.90E-02 |
| 105 | GO:0048511: rhythmic process | 2.90E-02 |
| 106 | GO:0010431: seed maturation | 2.90E-02 |
| 107 | GO:0006306: DNA methylation | 2.90E-02 |
| 108 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.90E-02 |
| 109 | GO:0015031: protein transport | 2.92E-02 |
| 110 | GO:0007005: mitochondrion organization | 3.09E-02 |
| 111 | GO:0010584: pollen exine formation | 3.49E-02 |
| 112 | GO:0008033: tRNA processing | 3.91E-02 |
| 113 | GO:0000413: protein peptidyl-prolyl isomerization | 3.91E-02 |
| 114 | GO:0048825: cotyledon development | 4.56E-02 |
| 115 | GO:0009749: response to glucose | 4.56E-02 |
| 116 | GO:0010183: pollen tube guidance | 4.56E-02 |
| 117 | GO:0000302: response to reactive oxygen species | 4.78E-02 |
| 118 | GO:0006635: fatty acid beta-oxidation | 4.78E-02 |
| 119 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 3.19E-208 |
| 4 | GO:0003729: mRNA binding | 5.92E-39 |
| 5 | GO:0019843: rRNA binding | 9.76E-15 |
| 6 | GO:0005078: MAP-kinase scaffold activity | 9.54E-06 |
| 7 | GO:0015288: porin activity | 2.33E-05 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.82E-05 |
| 9 | GO:0008308: voltage-gated anion channel activity | 3.30E-05 |
| 10 | GO:0003746: translation elongation factor activity | 4.92E-05 |
| 11 | GO:0003723: RNA binding | 4.99E-05 |
| 12 | GO:0008097: 5S rRNA binding | 7.03E-05 |
| 13 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 4.64E-04 |
| 14 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 4.64E-04 |
| 15 | GO:0005080: protein kinase C binding | 4.64E-04 |
| 16 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 4.64E-04 |
| 17 | GO:1990259: histone-glutamine methyltransferase activity | 4.64E-04 |
| 18 | GO:0035614: snRNA stem-loop binding | 4.64E-04 |
| 19 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 4.64E-04 |
| 20 | GO:0004828: serine-tRNA ligase activity | 4.64E-04 |
| 21 | GO:0043022: ribosome binding | 5.75E-04 |
| 22 | GO:0001055: RNA polymerase II activity | 9.90E-04 |
| 23 | GO:0030619: U1 snRNA binding | 1.00E-03 |
| 24 | GO:0015173: aromatic amino acid transmembrane transporter activity | 1.00E-03 |
| 25 | GO:0004750: ribulose-phosphate 3-epimerase activity | 1.00E-03 |
| 26 | GO:0032934: sterol binding | 1.00E-03 |
| 27 | GO:0001054: RNA polymerase I activity | 1.33E-03 |
| 28 | GO:0001056: RNA polymerase III activity | 1.52E-03 |
| 29 | GO:0008649: rRNA methyltransferase activity | 1.63E-03 |
| 30 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.63E-03 |
| 31 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.63E-03 |
| 32 | GO:0032947: protein complex scaffold | 1.63E-03 |
| 33 | GO:0008253: 5'-nucleotidase activity | 1.63E-03 |
| 34 | GO:0015266: protein channel activity | 1.73E-03 |
| 35 | GO:0005460: UDP-glucose transmembrane transporter activity | 2.37E-03 |
| 36 | GO:0004550: nucleoside diphosphate kinase activity | 2.37E-03 |
| 37 | GO:0047627: adenylylsulfatase activity | 2.37E-03 |
| 38 | GO:0004749: ribose phosphate diphosphokinase activity | 2.37E-03 |
| 39 | GO:0070628: proteasome binding | 3.18E-03 |
| 40 | GO:0016004: phospholipase activator activity | 3.18E-03 |
| 41 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 3.18E-03 |
| 42 | GO:0004298: threonine-type endopeptidase activity | 3.28E-03 |
| 43 | GO:0005275: amine transmembrane transporter activity | 4.08E-03 |
| 44 | GO:0005459: UDP-galactose transmembrane transporter activity | 4.08E-03 |
| 45 | GO:0031177: phosphopantetheine binding | 5.05E-03 |
| 46 | GO:0031593: polyubiquitin binding | 5.05E-03 |
| 47 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.41E-03 |
| 48 | GO:0000035: acyl binding | 6.09E-03 |
| 49 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 7.20E-03 |
| 50 | GO:0008235: metalloexopeptidase activity | 7.20E-03 |
| 51 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 7.20E-03 |
| 52 | GO:0030515: snoRNA binding | 7.20E-03 |
| 53 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 8.39E-03 |
| 54 | GO:0008233: peptidase activity | 1.04E-02 |
| 55 | GO:0008515: sucrose transmembrane transporter activity | 1.52E-02 |
| 56 | GO:0044183: protein binding involved in protein folding | 1.52E-02 |
| 57 | GO:0051119: sugar transmembrane transporter activity | 2.17E-02 |
| 58 | GO:0043130: ubiquitin binding | 2.53E-02 |
| 59 | GO:0051087: chaperone binding | 2.71E-02 |
| 60 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.90E-02 |
| 61 | GO:0008514: organic anion transmembrane transporter activity | 3.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005840: ribosome | 4.18E-142 |
| 3 | GO:0022626: cytosolic ribosome | 1.03E-131 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 5.32E-129 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 1.01E-88 |
| 6 | GO:0005730: nucleolus | 1.65E-44 |
| 7 | GO:0005737: cytoplasm | 3.15E-44 |
| 8 | GO:0005829: cytosol | 3.33E-41 |
| 9 | GO:0009506: plasmodesma | 1.68E-28 |
| 10 | GO:0015934: large ribosomal subunit | 1.63E-20 |
| 11 | GO:0005774: vacuolar membrane | 1.28E-17 |
| 12 | GO:0016020: membrane | 2.12E-16 |
| 13 | GO:0015935: small ribosomal subunit | 7.99E-16 |
| 14 | GO:0005773: vacuole | 1.87E-13 |
| 15 | GO:0005618: cell wall | 3.75E-09 |
| 16 | GO:0009507: chloroplast | 3.28E-06 |
| 17 | GO:0005886: plasma membrane | 8.57E-06 |
| 18 | GO:0005741: mitochondrial outer membrane | 2.36E-05 |
| 19 | GO:0005853: eukaryotic translation elongation factor 1 complex | 3.26E-05 |
| 20 | GO:0046930: pore complex | 3.30E-05 |
| 21 | GO:0005742: mitochondrial outer membrane translocase complex | 3.30E-05 |
| 22 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.18E-04 |
| 23 | GO:0019013: viral nucleocapsid | 1.43E-04 |
| 24 | GO:0000502: proteasome complex | 1.63E-04 |
| 25 | GO:0000419: DNA-directed RNA polymerase V complex | 2.36E-04 |
| 26 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.85E-04 |
| 27 | GO:0030686: 90S preribosome | 4.64E-04 |
| 28 | GO:0005736: DNA-directed RNA polymerase I complex | 8.40E-04 |
| 29 | GO:0005685: U1 snRNP | 8.40E-04 |
| 30 | GO:0005666: DNA-directed RNA polymerase III complex | 9.90E-04 |
| 31 | GO:0071011: precatalytic spliceosome | 9.90E-04 |
| 32 | GO:0015030: Cajal body | 9.90E-04 |
| 33 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.15E-03 |
| 34 | GO:0005681: spliceosomal complex | 1.29E-03 |
| 35 | GO:0071013: catalytic step 2 spliceosome | 1.33E-03 |
| 36 | GO:0034719: SMN-Sm protein complex | 1.63E-03 |
| 37 | GO:1990726: Lsm1-7-Pat1 complex | 2.37E-03 |
| 38 | GO:0005758: mitochondrial intermembrane space | 2.70E-03 |
| 39 | GO:0005682: U5 snRNP | 3.18E-03 |
| 40 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 3.18E-03 |
| 41 | GO:0005839: proteasome core complex | 3.28E-03 |
| 42 | GO:0005687: U4 snRNP | 4.08E-03 |
| 43 | GO:0097526: spliceosomal tri-snRNP complex | 4.08E-03 |
| 44 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.27E-03 |
| 45 | GO:0005743: mitochondrial inner membrane | 4.85E-03 |
| 46 | GO:0031428: box C/D snoRNP complex | 5.05E-03 |
| 47 | GO:0005689: U12-type spliceosomal complex | 6.09E-03 |
| 48 | GO:0016272: prefoldin complex | 6.09E-03 |
| 49 | GO:0071004: U2-type prespliceosome | 8.39E-03 |
| 50 | GO:0005688: U6 snRNP | 8.39E-03 |
| 51 | GO:0000421: autophagosome membrane | 8.39E-03 |
| 52 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 9.63E-03 |
| 53 | GO:0030529: intracellular ribonucleoprotein complex | 9.68E-03 |
| 54 | GO:0005686: U2 snRNP | 1.37E-02 |
| 55 | GO:0005740: mitochondrial envelope | 1.37E-02 |
| 56 | GO:0005622: intracellular | 1.45E-02 |
| 57 | GO:0048471: perinuclear region of cytoplasm | 1.52E-02 |
| 58 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.52E-02 |
| 59 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.52E-02 |
| 60 | GO:0031307: integral component of mitochondrial outer membrane | 1.68E-02 |
| 61 | GO:0032040: small-subunit processome | 1.68E-02 |
| 62 | GO:0005750: mitochondrial respiratory chain complex III | 2.00E-02 |
| 63 | GO:0070469: respiratory chain | 2.71E-02 |
| 64 | GO:0031410: cytoplasmic vesicle | 3.09E-02 |
| 65 | GO:0005834: heterotrimeric G-protein complex | 3.53E-02 |
| 66 | GO:0005654: nucleoplasm | 4.84E-02 |