co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15354

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
2	GO:0042908: xenobiotic transport	0.00E+00
3	GO:0009856: pollination	0.00E+00
4	GO:0018293: protein-FAD linkage	0.00E+00
5	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
6	GO:0009903: chloroplast avoidance movement	1.42E-07
7	GO:0007623: circadian rhythm	5.26E-06
8	GO:0071483: cellular response to blue light	6.94E-06
9	GO:0009902: chloroplast relocation	6.94E-06
10	GO:0009904: chloroplast accumulation movement	1.16E-05
11	GO:0010100: negative regulation of photomorphogenesis	5.72E-05
12	GO:0048438: floral whorl development	8.61E-05
13	GO:1902265: abscisic acid homeostasis	8.61E-05
14	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	8.61E-05
15	GO:0000103: sulfate assimilation	1.03E-04
16	GO:0009637: response to blue light	1.20E-04
17	GO:0006099: tricarboxylic acid cycle	1.28E-04
18	GO:0019388: galactose catabolic process	2.04E-04
19	GO:0007154: cell communication	2.04E-04
20	GO:0010220: positive regulation of vernalization response	2.04E-04
21	GO:0080183: response to photooxidative stress	2.04E-04
22	GO:0043100: pyrimidine nucleobase salvage	2.04E-04
23	GO:0042754: negative regulation of circadian rhythm	2.04E-04
24	GO:0006898: receptor-mediated endocytosis	2.04E-04
25	GO:0071230: cellular response to amino acid stimulus	3.42E-04
26	GO:0017006: protein-tetrapyrrole linkage	3.42E-04
27	GO:1901562: response to paraquat	3.42E-04
28	GO:0044375: regulation of peroxisome size	3.42E-04
29	GO:0016570: histone modification	3.42E-04
30	GO:0031022: nuclear migration along microfilament	3.42E-04
31	GO:0019419: sulfate reduction	3.42E-04
32	GO:0046686: response to cadmium ion	3.73E-04
33	GO:0009590: detection of gravity	4.92E-04
34	GO:1902476: chloride transmembrane transport	4.92E-04
35	GO:0009584: detection of visible light	4.92E-04
36	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.92E-04
37	GO:0015700: arsenite transport	4.92E-04
38	GO:0006520: cellular amino acid metabolic process	5.23E-04
39	GO:0009058: biosynthetic process	5.87E-04
40	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	6.42E-04
41	GO:0010600: regulation of auxin biosynthetic process	6.55E-04
42	GO:0010236: plastoquinone biosynthetic process	8.29E-04
43	GO:0009435: NAD biosynthetic process	8.29E-04
44	GO:0009739: response to gibberellin	9.41E-04
45	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.01E-03
46	GO:0070814: hydrogen sulfide biosynthetic process	1.01E-03
47	GO:0000060: protein import into nucleus, translocation	1.01E-03
48	GO:0010076: maintenance of floral meristem identity	1.20E-03
49	GO:0017148: negative regulation of translation	1.20E-03
50	GO:0010077: maintenance of inflorescence meristem identity	1.20E-03
51	GO:0006821: chloride transport	1.41E-03
52	GO:0070370: cellular heat acclimation	1.41E-03
53	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.41E-03
54	GO:0006368: transcription elongation from RNA polymerase II promoter	1.41E-03
55	GO:0030091: protein repair	1.63E-03
56	GO:0031540: regulation of anthocyanin biosynthetic process	1.63E-03
57	GO:0009231: riboflavin biosynthetic process	1.63E-03
58	GO:0006102: isocitrate metabolic process	1.63E-03
59	GO:0016559: peroxisome fission	1.63E-03
60	GO:0005978: glycogen biosynthetic process	1.63E-03
61	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.63E-03
62	GO:0015996: chlorophyll catabolic process	1.86E-03
63	GO:0048574: long-day photoperiodism, flowering	1.86E-03
64	GO:0046685: response to arsenic-containing substance	2.10E-03
65	GO:0009585: red, far-red light phototransduction	2.54E-03
66	GO:0009970: cellular response to sulfate starvation	2.61E-03
67	GO:0009909: regulation of flower development	2.80E-03
68	GO:0000272: polysaccharide catabolic process	2.87E-03
69	GO:0018119: peptidyl-cysteine S-nitrosylation	2.87E-03
70	GO:0048229: gametophyte development	2.87E-03
71	GO:0006816: calcium ion transport	2.87E-03
72	GO:0010582: floral meristem determinacy	3.15E-03
73	GO:0030048: actin filament-based movement	3.43E-03
74	GO:0006108: malate metabolic process	3.43E-03
75	GO:0006006: glucose metabolic process	3.43E-03
76	GO:0007015: actin filament organization	3.73E-03
77	GO:0007031: peroxisome organization	4.03E-03
78	GO:0051017: actin filament bundle assembly	4.65E-03
79	GO:0019344: cysteine biosynthetic process	4.65E-03
80	GO:0008299: isoprenoid biosynthetic process	4.98E-03
81	GO:0006874: cellular calcium ion homeostasis	4.98E-03
82	GO:0040007: growth	6.01E-03
83	GO:0009693: ethylene biosynthetic process	6.01E-03
84	GO:0009651: response to salt stress	6.19E-03
85	GO:0035556: intracellular signal transduction	6.66E-03
86	GO:0080022: primary root development	7.10E-03
87	GO:0048653: anther development	7.10E-03
88	GO:0042631: cellular response to water deprivation	7.10E-03
89	GO:0042391: regulation of membrane potential	7.10E-03
90	GO:0010182: sugar mediated signaling pathway	7.48E-03
91	GO:0009741: response to brassinosteroid	7.48E-03
92	GO:0042752: regulation of circadian rhythm	7.87E-03
93	GO:0019252: starch biosynthetic process	8.26E-03
94	GO:0009851: auxin biosynthetic process	8.26E-03
95	GO:0071554: cell wall organization or biogenesis	8.66E-03
96	GO:0009630: gravitropism	9.07E-03
97	GO:0006464: cellular protein modification process	9.91E-03
98	GO:0009567: double fertilization forming a zygote and endosperm	9.91E-03
99	GO:0009723: response to ethylene	1.11E-02
100	GO:0010029: regulation of seed germination	1.17E-02
101	GO:0080167: response to karrikin	1.19E-02
102	GO:0015995: chlorophyll biosynthetic process	1.26E-02
103	GO:0018298: protein-chromophore linkage	1.35E-02
104	GO:0045454: cell redox homeostasis	1.42E-02
105	GO:0006811: ion transport	1.45E-02
106	GO:0045087: innate immune response	1.60E-02
107	GO:0009751: response to salicylic acid	1.73E-02
108	GO:0006508: proteolysis	1.87E-02
109	GO:0009753: response to jasmonic acid	1.89E-02
110	GO:0009640: photomorphogenesis	1.92E-02
111	GO:0006855: drug transmembrane transport	2.14E-02
112	GO:0000165: MAPK cascade	2.19E-02
113	GO:0009409: response to cold	2.23E-02
114	GO:0055114: oxidation-reduction process	2.25E-02
115	GO:0051603: proteolysis involved in cellular protein catabolic process	2.43E-02
116	GO:0010224: response to UV-B	2.43E-02
117	GO:0006355: regulation of transcription, DNA-templated	2.58E-02
118	GO:0005975: carbohydrate metabolic process	2.58E-02
119	GO:0006468: protein phosphorylation	2.60E-02
120	GO:0009620: response to fungus	2.85E-02
121	GO:0009416: response to light stimulus	3.12E-02
122	GO:0045893: positive regulation of transcription, DNA-templated	3.58E-02
123	GO:0055085: transmembrane transport	3.95E-02
124	GO:0006351: transcription, DNA-templated	3.99E-02
125	GO:0010228: vegetative to reproductive phase transition of meristem	4.64E-02

Rank	GO Term	Adjusted P value
1	GO:0047504: (-)-menthol dehydrogenase activity	0.00E+00
2	GO:0047501: (+)-neomenthol dehydrogenase activity	0.00E+00
3	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
4	GO:0008734: L-aspartate oxidase activity	0.00E+00
5	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
6	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	8.01E-08
7	GO:0008106: alcohol dehydrogenase (NADP+) activity	3.65E-06
8	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.77E-05
9	GO:0000989: transcription factor activity, transcription factor binding	7.10E-05
10	GO:0071992: phytochelatin transmembrane transporter activity	8.61E-05
11	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	8.61E-05
12	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	8.61E-05
13	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	8.61E-05
14	GO:0008066: glutamate receptor activity	8.61E-05
15	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	8.61E-05
16	GO:0009671: nitrate:proton symporter activity	8.61E-05
17	GO:0010313: phytochrome binding	8.61E-05
18	GO:0009973: adenylyl-sulfate reductase activity	2.04E-04
19	GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding	2.04E-04
20	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	2.04E-04
21	GO:0004614: phosphoglucomutase activity	2.04E-04
22	GO:0004450: isocitrate dehydrogenase (NADP+) activity	2.04E-04
23	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	2.04E-04
24	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	2.04E-04
25	GO:0050347: trans-octaprenyltranstransferase activity	2.04E-04
26	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	2.04E-04
27	GO:0008020: G-protein coupled photoreceptor activity	3.42E-04
28	GO:0004781: sulfate adenylyltransferase (ATP) activity	3.42E-04
29	GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding	3.42E-04
30	GO:0003935: GTP cyclohydrolase II activity	3.42E-04
31	GO:0048027: mRNA 5'-UTR binding	4.92E-04
32	GO:0030170: pyridoxal phosphate binding	6.25E-04
33	GO:0005253: anion channel activity	6.55E-04
34	GO:0008177: succinate dehydrogenase (ubiquinone) activity	8.29E-04
35	GO:0004866: endopeptidase inhibitor activity	1.01E-03
36	GO:0005247: voltage-gated chloride channel activity	1.01E-03
37	GO:0004709: MAP kinase kinase kinase activity	1.01E-03
38	GO:0030247: polysaccharide binding	1.07E-03
39	GO:0042802: identical protein binding	1.10E-03
40	GO:0008236: serine-type peptidase activity	1.12E-03
41	GO:0016161: beta-amylase activity	1.20E-03
42	GO:0030060: L-malate dehydrogenase activity	1.20E-03
43	GO:0005261: cation channel activity	1.20E-03
44	GO:0009881: photoreceptor activity	1.41E-03
45	GO:0030674: protein binding, bridging	1.63E-03
46	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.63E-03
47	GO:0004185: serine-type carboxypeptidase activity	1.89E-03
48	GO:0004871: signal transducer activity	2.45E-03
49	GO:0004673: protein histidine kinase activity	2.61E-03
50	GO:0008559: xenobiotic-transporting ATPase activity	2.87E-03
51	GO:0000155: phosphorelay sensor kinase activity	3.43E-03
52	GO:0005262: calcium channel activity	3.43E-03
53	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.73E-03
54	GO:0004970: ionotropic glutamate receptor activity	4.03E-03
55	GO:0030552: cAMP binding	4.03E-03
56	GO:0030553: cGMP binding	4.03E-03
57	GO:0005217: intracellular ligand-gated ion channel activity	4.03E-03
58	GO:0005216: ion channel activity	4.98E-03
59	GO:0004672: protein kinase activity	6.15E-03
60	GO:0005249: voltage-gated potassium channel activity	7.10E-03
61	GO:0030551: cyclic nucleotide binding	7.10E-03
62	GO:0004527: exonuclease activity	7.48E-03
63	GO:0004518: nuclease activity	9.07E-03
64	GO:0000287: magnesium ion binding	9.38E-03
65	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	9.48E-03
66	GO:0005507: copper ion binding	9.74E-03
67	GO:0008483: transaminase activity	1.03E-02
68	GO:0016413: O-acetyltransferase activity	1.08E-02
69	GO:0042803: protein homodimerization activity	1.49E-02
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.60E-02
71	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.70E-02
72	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.75E-02
73	GO:0009055: electron carrier activity	1.89E-02
74	GO:0016491: oxidoreductase activity	2.16E-02
75	GO:0051287: NAD binding	2.19E-02
76	GO:0016298: lipase activity	2.43E-02
77	GO:0015035: protein disulfide oxidoreductase activity	3.11E-02
78	GO:0008270: zinc ion binding	3.50E-02
79	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.92E-02
80	GO:0005516: calmodulin binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0031313: extrinsic component of endosome membrane	0.00E+00
2	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	8.61E-05
3	GO:0009526: plastid envelope	6.55E-04
4	GO:0016593: Cdc73/Paf1 complex	6.55E-04
5	GO:0005759: mitochondrial matrix	7.29E-04
6	GO:0010319: stromule	8.18E-04
7	GO:0034707: chloride channel complex	1.01E-03
8	GO:0031982: vesicle	1.63E-03
9	GO:0009501: amyloplast	1.63E-03
10	GO:0009507: chloroplast	1.68E-03
11	GO:0005779: integral component of peroxisomal membrane	1.86E-03
12	GO:0005884: actin filament	2.87E-03
13	GO:0005578: proteinaceous extracellular matrix	3.43E-03
14	GO:0031012: extracellular matrix	3.43E-03
15	GO:0005764: lysosome	3.73E-03
16	GO:0005623: cell	4.61E-03
17	GO:0009570: chloroplast stroma	6.41E-03
18	GO:0046658: anchored component of plasma membrane	8.18E-03
19	GO:0005778: peroxisomal membrane	1.03E-02
20	GO:0031969: chloroplast membrane	1.19E-02
21	GO:0005622: intracellular	1.29E-02
22	GO:0000325: plant-type vacuole	1.50E-02
23	GO:0009536: plastid	1.97E-02
24	GO:0009505: plant-type cell wall	2.03E-02
25	GO:0005774: vacuolar membrane	2.24E-02
26	GO:0005747: mitochondrial respiratory chain complex I	2.73E-02
27	GO:0005834: heterotrimeric G-protein complex	2.79E-02
28	GO:0010287: plastoglobule	3.44E-02
29	GO:0009543: chloroplast thylakoid lumen	3.57E-02
30	GO:0005777: peroxisome	3.58E-02
31	GO:0005773: vacuole	4.17E-02
32	GO:0005829: cytosol	4.46E-02
33	GO:0009705: plant-type vacuole membrane	4.49E-02