co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
2	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
3	GO:0019593: mannitol biosynthetic process	0.00E+00
4	GO:0010200: response to chitin	5.26E-07
5	GO:0009873: ethylene-activated signaling pathway	6.48E-06
6	GO:0000038: very long-chain fatty acid metabolic process	4.80E-05
7	GO:0006811: ion transport	1.60E-04
8	GO:0035435: phosphate ion transmembrane transport	1.66E-04
9	GO:0006631: fatty acid metabolic process	2.72E-04
10	GO:0006633: fatty acid biosynthetic process	3.25E-04
11	GO:0009865: pollen tube adhesion	3.42E-04
12	GO:0006680: glucosylceramide catabolic process	3.42E-04
13	GO:0090421: embryonic meristem initiation	3.42E-04
14	GO:0009609: response to symbiotic bacterium	3.42E-04
15	GO:0051180: vitamin transport	3.42E-04
16	GO:0030974: thiamine pyrophosphate transport	3.42E-04
17	GO:0042335: cuticle development	3.43E-04
18	GO:2000070: regulation of response to water deprivation	3.67E-04
19	GO:0045489: pectin biosynthetic process	3.79E-04
20	GO:0045490: pectin catabolic process	3.88E-04
21	GO:0098656: anion transmembrane transport	5.41E-04
22	GO:0009611: response to wounding	5.47E-04
23	GO:0009737: response to abscisic acid	5.97E-04
24	GO:2000280: regulation of root development	6.39E-04
25	GO:0006355: regulation of transcription, DNA-templated	7.18E-04
26	GO:0015709: thiosulfate transport	7.45E-04
27	GO:0071422: succinate transmembrane transport	7.45E-04
28	GO:0031407: oxylipin metabolic process	7.45E-04
29	GO:0010289: homogalacturonan biosynthetic process	7.45E-04
30	GO:0006898: receptor-mediated endocytosis	7.45E-04
31	GO:0015893: drug transport	7.45E-04
32	GO:1901679: nucleotide transmembrane transport	7.45E-04
33	GO:0015786: UDP-glucose transport	7.45E-04
34	GO:0042545: cell wall modification	8.18E-04
35	GO:0010029: regulation of seed germination	8.55E-04
36	GO:0009624: response to nematode	8.56E-04
37	GO:0030148: sphingolipid biosynthetic process	8.59E-04
38	GO:0018107: peptidyl-threonine phosphorylation	1.11E-03
39	GO:0016045: detection of bacterium	1.21E-03
40	GO:0010359: regulation of anion channel activity	1.21E-03
41	GO:0010288: response to lead ion	1.21E-03
42	GO:0090630: activation of GTPase activity	1.21E-03
43	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.21E-03
44	GO:0015783: GDP-fucose transport	1.21E-03
45	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.21E-03
46	GO:1902448: positive regulation of shade avoidance	1.21E-03
47	GO:0080168: abscisic acid transport	1.21E-03
48	GO:0080121: AMP transport	1.21E-03
49	GO:0044210: 'de novo' CTP biosynthetic process	1.21E-03
50	GO:0070588: calcium ion transmembrane transport	1.39E-03
51	GO:0010025: wax biosynthetic process	1.55E-03
52	GO:0009409: response to cold	1.59E-03
53	GO:0010371: regulation of gibberellin biosynthetic process	1.74E-03
54	GO:0015729: oxaloacetate transport	1.74E-03
55	GO:0072334: UDP-galactose transmembrane transport	1.74E-03
56	GO:0006839: mitochondrial transport	1.76E-03
57	GO:0031408: oxylipin biosynthetic process	2.09E-03
58	GO:0042991: transcription factor import into nucleus	2.33E-03
59	GO:1902347: response to strigolactone	2.33E-03
60	GO:0046345: abscisic acid catabolic process	2.33E-03
61	GO:0051365: cellular response to potassium ion starvation	2.33E-03
62	GO:0022622: root system development	2.33E-03
63	GO:0071585: detoxification of cadmium ion	2.33E-03
64	GO:0009414: response to water deprivation	2.33E-03
65	GO:0015867: ATP transport	2.33E-03
66	GO:0001944: vasculature development	2.49E-03
67	GO:0010468: regulation of gene expression	2.56E-03
68	GO:0042538: hyperosmotic salinity response	2.76E-03
69	GO:0070417: cellular response to cold	2.93E-03
70	GO:0006873: cellular ion homeostasis	2.98E-03
71	GO:0048497: maintenance of floral organ identity	2.98E-03
72	GO:0006665: sphingolipid metabolic process	2.98E-03
73	GO:0032957: inositol trisphosphate metabolic process	2.98E-03
74	GO:0071423: malate transmembrane transport	2.98E-03
75	GO:0006656: phosphatidylcholine biosynthetic process	2.98E-03
76	GO:0006351: transcription, DNA-templated	3.30E-03
77	GO:0048868: pollen tube development	3.41E-03
78	GO:0006751: glutathione catabolic process	3.68E-03
79	GO:0015866: ADP transport	3.68E-03
80	GO:0009913: epidermal cell differentiation	3.68E-03
81	GO:0047484: regulation of response to osmotic stress	3.68E-03
82	GO:1900425: negative regulation of defense response to bacterium	3.68E-03
83	GO:0048367: shoot system development	3.89E-03
84	GO:0000302: response to reactive oxygen species	4.22E-03
85	GO:0006970: response to osmotic stress	4.27E-03
86	GO:0098655: cation transmembrane transport	4.43E-03
87	GO:0010555: response to mannitol	4.43E-03
88	GO:1901001: negative regulation of response to salt stress	4.43E-03
89	GO:2000033: regulation of seed dormancy process	4.43E-03
90	GO:0045926: negative regulation of growth	4.43E-03
91	GO:0019760: glucosinolate metabolic process	5.11E-03
92	GO:1902074: response to salt	5.23E-03
93	GO:0032880: regulation of protein localization	5.23E-03
94	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.23E-03
95	GO:0006955: immune response	5.23E-03
96	GO:0030497: fatty acid elongation	5.23E-03
97	GO:0008272: sulfate transport	5.23E-03
98	GO:0007155: cell adhesion	6.08E-03
99	GO:0008610: lipid biosynthetic process	6.08E-03
100	GO:0009819: drought recovery	6.08E-03
101	GO:0042255: ribosome assembly	6.08E-03
102	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	6.08E-03
103	GO:0006353: DNA-templated transcription, termination	6.08E-03
104	GO:0009880: embryonic pattern specification	6.98E-03
105	GO:0009827: plant-type cell wall modification	6.98E-03
106	GO:0071555: cell wall organization	7.61E-03
107	GO:0009790: embryo development	7.67E-03
108	GO:0001708: cell fate specification	7.91E-03
109	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.91E-03
110	GO:0007346: regulation of mitotic cell cycle	8.89E-03
111	GO:0048268: clathrin coat assembly	8.89E-03
112	GO:0042761: very long-chain fatty acid biosynthetic process	8.89E-03
113	GO:0009751: response to salicylic acid	9.36E-03
114	GO:0019538: protein metabolic process	9.92E-03
115	GO:0055062: phosphate ion homeostasis	9.92E-03
116	GO:0016051: carbohydrate biosynthetic process	1.01E-02
117	GO:0055085: transmembrane transport	1.02E-02
118	GO:0010015: root morphogenesis	1.10E-02
119	GO:0052544: defense response by callose deposition in cell wall	1.10E-02
120	GO:0006470: protein dephosphorylation	1.13E-02
121	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.21E-02
122	GO:0051707: response to other organism	1.31E-02
123	GO:0050826: response to freezing	1.32E-02
124	GO:0005986: sucrose biosynthetic process	1.32E-02
125	GO:2000012: regulation of auxin polar transport	1.32E-02
126	GO:0030048: actin filament-based movement	1.32E-02
127	GO:0048467: gynoecium development	1.44E-02
128	GO:0006855: drug transmembrane transport	1.53E-02
129	GO:0006636: unsaturated fatty acid biosynthetic process	1.69E-02
130	GO:0009833: plant-type primary cell wall biogenesis	1.69E-02
131	GO:2000377: regulation of reactive oxygen species metabolic process	1.82E-02
132	GO:0009863: salicylic acid mediated signaling pathway	1.82E-02
133	GO:0010187: negative regulation of seed germination	1.82E-02
134	GO:0009695: jasmonic acid biosynthetic process	1.95E-02
135	GO:0009269: response to desiccation	2.08E-02
136	GO:0051321: meiotic cell cycle	2.08E-02
137	GO:0009416: response to light stimulus	2.27E-02
138	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.27E-02
139	GO:0006979: response to oxidative stress	2.29E-02
140	GO:0035556: intracellular signal transduction	2.46E-02
141	GO:0010584: pollen exine formation	2.51E-02
142	GO:0048443: stamen development	2.51E-02
143	GO:0018105: peptidyl-serine phosphorylation	2.59E-02
144	GO:0008284: positive regulation of cell proliferation	2.66E-02
145	GO:0000271: polysaccharide biosynthetic process	2.81E-02
146	GO:0000226: microtubule cytoskeleton organization	2.81E-02
147	GO:0000398: mRNA splicing, via spliceosome	2.90E-02
148	GO:0010268: brassinosteroid homeostasis	2.96E-02
149	GO:0010154: fruit development	2.96E-02
150	GO:0009958: positive gravitropism	2.96E-02
151	GO:0006814: sodium ion transport	3.12E-02
152	GO:0009651: response to salt stress	3.21E-02
153	GO:0016132: brassinosteroid biosynthetic process	3.44E-02
154	GO:0080156: mitochondrial mRNA modification	3.44E-02
155	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.44E-02
156	GO:0010193: response to ozone	3.44E-02
157	GO:0032502: developmental process	3.61E-02
158	GO:0048364: root development	3.72E-02
159	GO:0016125: sterol metabolic process	3.95E-02
160	GO:0009639: response to red or far red light	3.95E-02
161	GO:0006904: vesicle docking involved in exocytosis	4.12E-02
162	GO:0010150: leaf senescence	4.34E-02
163	GO:0007623: circadian rhythm	4.34E-02
164	GO:0009816: defense response to bacterium, incompatible interaction	4.65E-02
165	GO:0009739: response to gibberellin	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
4	GO:0009922: fatty acid elongase activity	1.36E-06
5	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.75E-06
6	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.75E-06
7	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.75E-06
8	GO:0016629: 12-oxophytodienoate reductase activity	5.29E-06
9	GO:0070330: aromatase activity	1.87E-05
10	GO:0003883: CTP synthase activity	4.12E-05
11	GO:0018685: alkane 1-monooxygenase activity	1.15E-04
12	GO:0004348: glucosylceramidase activity	3.42E-04
13	GO:0090422: thiamine pyrophosphate transporter activity	3.42E-04
14	GO:0004105: choline-phosphate cytidylyltransferase activity	3.42E-04
15	GO:0090440: abscisic acid transporter activity	3.42E-04
16	GO:0015297: antiporter activity	3.55E-04
17	GO:0043565: sequence-specific DNA binding	4.43E-04
18	GO:0045330: aspartyl esterase activity	5.83E-04
19	GO:1901677: phosphate transmembrane transporter activity	7.45E-04
20	GO:0017022: myosin binding	7.45E-04
21	GO:0004103: choline kinase activity	7.45E-04
22	GO:0001047: core promoter binding	7.45E-04
23	GO:0042389: omega-3 fatty acid desaturase activity	7.45E-04
24	GO:0017040: ceramidase activity	7.45E-04
25	GO:0003839: gamma-glutamylcyclotransferase activity	7.45E-04
26	GO:0015117: thiosulfate transmembrane transporter activity	7.45E-04
27	GO:0030599: pectinesterase activity	7.82E-04
28	GO:0004383: guanylate cyclase activity	1.21E-03
29	GO:0005457: GDP-fucose transmembrane transporter activity	1.21E-03
30	GO:0047325: inositol tetrakisphosphate 1-kinase activity	1.21E-03
31	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.21E-03
32	GO:0015141: succinate transmembrane transporter activity	1.21E-03
33	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	1.21E-03
34	GO:0047274: galactinol-sucrose galactosyltransferase activity	1.21E-03
35	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.21E-03
36	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.58E-03
37	GO:0005460: UDP-glucose transmembrane transporter activity	1.74E-03
38	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.74E-03
39	GO:0001653: peptide receptor activity	1.74E-03
40	GO:0005432: calcium:sodium antiporter activity	1.74E-03
41	GO:0015131: oxaloacetate transmembrane transporter activity	1.74E-03
42	GO:0004707: MAP kinase activity	2.09E-03
43	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.28E-03
44	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.98E-03
45	GO:0005459: UDP-galactose transmembrane transporter activity	2.98E-03
46	GO:0080122: AMP transmembrane transporter activity	2.98E-03
47	GO:0010181: FMN binding	3.67E-03
48	GO:0005347: ATP transmembrane transporter activity	4.43E-03
49	GO:0015217: ADP transmembrane transporter activity	4.43E-03
50	GO:0016621: cinnamoyl-CoA reductase activity	5.23E-03
51	GO:0015140: malate transmembrane transporter activity	5.23E-03
52	GO:0015491: cation:cation antiporter activity	6.08E-03
53	GO:0016209: antioxidant activity	6.08E-03
54	GO:0008308: voltage-gated anion channel activity	6.98E-03
55	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.98E-03
56	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	7.57E-03
57	GO:0044212: transcription regulatory region DNA binding	7.61E-03
58	GO:0000989: transcription factor activity, transcription factor binding	7.91E-03
59	GO:0004722: protein serine/threonine phosphatase activity	8.01E-03
60	GO:0005096: GTPase activator activity	8.37E-03
61	GO:0015238: drug transmembrane transporter activity	8.37E-03
62	GO:0005545: 1-phosphatidylinositol binding	9.92E-03
63	GO:0016301: kinase activity	1.01E-02
64	GO:0003677: DNA binding	1.04E-02
65	GO:0015116: sulfate transmembrane transporter activity	1.21E-02
66	GO:0005315: inorganic phosphate transmembrane transporter activity	1.32E-02
67	GO:0005262: calcium channel activity	1.32E-02
68	GO:0019888: protein phosphatase regulator activity	1.32E-02
69	GO:0015114: phosphate ion transmembrane transporter activity	1.32E-02
70	GO:0005388: calcium-transporting ATPase activity	1.32E-02
71	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.44E-02
72	GO:0003774: motor activity	1.44E-02
73	GO:0008083: growth factor activity	1.44E-02
74	GO:0008146: sulfotransferase activity	1.56E-02
75	GO:0004857: enzyme inhibitor activity	1.82E-02
76	GO:0030570: pectate lyase activity	2.37E-02
77	GO:0003727: single-stranded RNA binding	2.51E-02
78	GO:0008514: organic anion transmembrane transporter activity	2.51E-02
79	GO:0016746: transferase activity, transferring acyl groups	2.59E-02
80	GO:0018024: histone-lysine N-methyltransferase activity	2.66E-02
81	GO:0030276: clathrin binding	2.96E-02
82	GO:0016758: transferase activity, transferring hexosyl groups	3.07E-02
83	GO:0004674: protein serine/threonine kinase activity	3.17E-02
84	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.41E-02
85	GO:0004518: nuclease activity	3.61E-02
86	GO:0046872: metal ion binding	3.63E-02
87	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.05E-02
88	GO:0005516: calmodulin binding	4.12E-02
89	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.12E-02
90	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.12E-02
91	GO:0016413: O-acetyltransferase activity	4.30E-02
92	GO:0016597: amino acid binding	4.30E-02

Rank	GO Term	Adjusted P value
1	GO:0070382: exocytic vesicle	3.42E-04
2	GO:0046658: anchored component of plasma membrane	6.44E-04
3	GO:0042170: plastid membrane	7.45E-04
4	GO:0030133: transport vesicle	7.45E-04
5	GO:0045177: apical part of cell	1.74E-03
6	GO:0005618: cell wall	3.32E-03
7	GO:0000793: condensed chromosome	3.68E-03
8	GO:0000794: condensed nuclear chromosome	5.23E-03
9	GO:0005622: intracellular	5.90E-03
10	GO:0016021: integral component of membrane	7.49E-03
11	GO:0005743: mitochondrial inner membrane	8.57E-03
12	GO:0016604: nuclear body	8.89E-03
13	GO:0000159: protein phosphatase type 2A complex	1.10E-02
14	GO:0009505: plant-type cell wall	1.18E-02
15	GO:0005938: cell cortex	1.32E-02
16	GO:0009508: plastid chromosome	1.32E-02
17	GO:0031225: anchored component of membrane	1.45E-02
18	GO:0005768: endosome	1.89E-02
19	GO:0005905: clathrin-coated pit	2.08E-02
20	GO:0030136: clathrin-coated vesicle	2.66E-02
21	GO:0005770: late endosome	2.96E-02
22	GO:0000145: exocyst	3.61E-02
23	GO:0005694: chromosome	3.61E-02
24	GO:0000139: Golgi membrane	3.75E-02
25	GO:0071944: cell periphery	3.78E-02
26	GO:0009295: nucleoid	4.12E-02
27	GO:0005802: trans-Golgi network	4.50E-02
28	GO:0005789: endoplasmic reticulum membrane	4.56E-02
29	GO:0005634: nucleus	4.80E-02
30	GO:0005615: extracellular space	4.84E-02