co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15095

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061157: mRNA destabilization	0.00E+00
2	GO:0090706: specification of plant organ position	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0042493: response to drug	0.00E+00
5	GO:0048507: meristem development	1.07E-06
6	GO:0010450: inflorescence meristem growth	9.88E-05
7	GO:0005980: glycogen catabolic process	9.88E-05
8	GO:0010480: microsporocyte differentiation	9.88E-05
9	GO:0009773: photosynthetic electron transport in photosystem I	1.48E-04
10	GO:0009405: pathogenesis	3.86E-04
11	GO:0045165: cell fate commitment	3.86E-04
12	GO:0010239: chloroplast mRNA processing	5.54E-04
13	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.54E-04
14	GO:0009650: UV protection	5.54E-04
15	GO:0022622: root system development	7.37E-04
16	GO:0006552: leucine catabolic process	7.37E-04
17	GO:0032502: developmental process	8.14E-04
18	GO:1902183: regulation of shoot apical meristem development	9.32E-04
19	GO:0010158: abaxial cell fate specification	9.32E-04
20	GO:0045490: pectin catabolic process	1.03E-03
21	GO:0003006: developmental process involved in reproduction	1.14E-03
22	GO:1901259: chloroplast rRNA processing	1.36E-03
23	GO:0048437: floral organ development	1.59E-03
24	GO:0022904: respiratory electron transport chain	1.59E-03
25	GO:0032880: regulation of protein localization	1.59E-03
26	GO:0009826: unidimensional cell growth	1.69E-03
27	GO:0006353: DNA-templated transcription, termination	1.84E-03
28	GO:0070413: trehalose metabolism in response to stress	1.84E-03
29	GO:0006605: protein targeting	1.84E-03
30	GO:0010492: maintenance of shoot apical meristem identity	1.84E-03
31	GO:0010093: specification of floral organ identity	2.10E-03
32	GO:0009827: plant-type cell wall modification	2.10E-03
33	GO:0009640: photomorphogenesis	2.27E-03
34	GO:2000024: regulation of leaf development	2.37E-03
35	GO:0009664: plant-type cell wall organization	2.83E-03
36	GO:0006949: syncytium formation	2.95E-03
37	GO:0009299: mRNA transcription	2.95E-03
38	GO:0048829: root cap development	2.95E-03
39	GO:0010015: root morphogenesis	3.25E-03
40	GO:0006913: nucleocytoplasmic transport	3.25E-03
41	GO:0048229: gametophyte development	3.25E-03
42	GO:0010582: floral meristem determinacy	3.57E-03
43	GO:0007165: signal transduction	3.73E-03
44	GO:0010075: regulation of meristem growth	3.89E-03
45	GO:0009725: response to hormone	3.89E-03
46	GO:2000012: regulation of auxin polar transport	3.89E-03
47	GO:0010628: positive regulation of gene expression	3.89E-03
48	GO:0018107: peptidyl-threonine phosphorylation	3.89E-03
49	GO:0009740: gibberellic acid mediated signaling pathway	4.06E-03
50	GO:0009266: response to temperature stimulus	4.22E-03
51	GO:0009934: regulation of meristem structural organization	4.22E-03
52	GO:0006302: double-strand break repair	4.22E-03
53	GO:0048467: gynoecium development	4.22E-03
54	GO:0009933: meristem structural organization	4.22E-03
55	GO:0009742: brassinosteroid mediated signaling pathway	4.56E-03
56	GO:0010030: positive regulation of seed germination	4.57E-03
57	GO:0009944: polarity specification of adaxial/abaxial axis	5.28E-03
58	GO:0005992: trehalose biosynthetic process	5.28E-03
59	GO:0007017: microtubule-based process	5.65E-03
60	GO:0048511: rhythmic process	6.03E-03
61	GO:0051321: meiotic cell cycle	6.03E-03
62	GO:0003333: amino acid transmembrane transport	6.03E-03
63	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	6.82E-03
64	GO:0009411: response to UV	6.82E-03
65	GO:0071369: cellular response to ethylene stimulus	6.82E-03
66	GO:0040008: regulation of growth	7.09E-03
67	GO:0006284: base-excision repair	7.23E-03
68	GO:0009306: protein secretion	7.23E-03
69	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.64E-03
70	GO:0008284: positive regulation of cell proliferation	7.64E-03
71	GO:0048653: anther development	8.07E-03
72	GO:0042631: cellular response to water deprivation	8.07E-03
73	GO:0009741: response to brassinosteroid	8.50E-03
74	GO:0010154: fruit development	8.50E-03
75	GO:0010305: leaf vascular tissue pattern formation	8.50E-03
76	GO:0009958: positive gravitropism	8.50E-03
77	GO:0005975: carbohydrate metabolic process	8.56E-03
78	GO:0042752: regulation of circadian rhythm	8.94E-03
79	GO:0009646: response to absence of light	8.94E-03
80	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	9.85E-03
81	GO:0009828: plant-type cell wall loosening	1.13E-02
82	GO:0010027: thylakoid membrane organization	1.28E-02
83	GO:0009607: response to biotic stimulus	1.33E-02
84	GO:0009627: systemic acquired resistance	1.38E-02
85	GO:0080167: response to karrikin	1.43E-02
86	GO:0015995: chlorophyll biosynthetic process	1.43E-02
87	GO:0048573: photoperiodism, flowering	1.43E-02
88	GO:0006950: response to stress	1.43E-02
89	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.48E-02
90	GO:0044550: secondary metabolite biosynthetic process	1.55E-02
91	GO:0009910: negative regulation of flower development	1.71E-02
92	GO:0009631: cold acclimation	1.71E-02
93	GO:0048527: lateral root development	1.71E-02
94	GO:0045892: negative regulation of transcription, DNA-templated	1.74E-02
95	GO:0006865: amino acid transport	1.76E-02
96	GO:0006281: DNA repair	2.11E-02
97	GO:0051603: proteolysis involved in cellular protein catabolic process	2.77E-02
98	GO:0009909: regulation of flower development	2.90E-02
99	GO:0009734: auxin-activated signaling pathway	2.98E-02
100	GO:0006810: transport	3.11E-02
101	GO:0009735: response to cytokinin	3.43E-02
102	GO:0018105: peptidyl-serine phosphorylation	3.54E-02
103	GO:0042744: hydrogen peroxide catabolic process	4.46E-02
104	GO:0009790: embryo development	4.54E-02
105	GO:0006633: fatty acid biosynthetic process	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
2	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
3	GO:0048039: ubiquinone binding	0.00E+00
4	GO:0030570: pectate lyase activity	1.77E-05
5	GO:0008184: glycogen phosphorylase activity	9.88E-05
6	GO:0004645: phosphorylase activity	9.88E-05
7	GO:0043425: bHLH transcription factor binding	2.32E-04
8	GO:0016868: intramolecular transferase activity, phosphotransferases	2.32E-04
9	GO:0004180: carboxypeptidase activity	3.86E-04
10	GO:0090729: toxin activity	3.86E-04
11	GO:0016805: dipeptidase activity	3.86E-04
12	GO:0016851: magnesium chelatase activity	5.54E-04
13	GO:0010328: auxin influx transmembrane transporter activity	7.37E-04
14	GO:0016829: lyase activity	7.62E-04
15	GO:0008725: DNA-3-methyladenine glycosylase activity	9.32E-04
16	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	9.32E-04
17	GO:0080030: methyl indole-3-acetate esterase activity	1.14E-03
18	GO:0042578: phosphoric ester hydrolase activity	1.14E-03
19	GO:0004462: lactoylglutathione lyase activity	1.14E-03
20	GO:0015020: glucuronosyltransferase activity	2.95E-03
21	GO:0004805: trehalose-phosphatase activity	2.95E-03
22	GO:0004521: endoribonuclease activity	3.57E-03
23	GO:0008083: growth factor activity	4.22E-03
24	GO:0046872: metal ion binding	4.28E-03
25	GO:0008408: 3'-5' exonuclease activity	6.03E-03
26	GO:0033612: receptor serine/threonine kinase binding	6.03E-03
27	GO:0003727: single-stranded RNA binding	7.23E-03
28	GO:0016791: phosphatase activity	1.13E-02
29	GO:0016788: hydrolase activity, acting on ester bonds	1.17E-02
30	GO:0005200: structural constituent of cytoskeleton	1.18E-02
31	GO:0008236: serine-type peptidase activity	1.49E-02
32	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.54E-02
33	GO:0005096: GTPase activator activity	1.60E-02
34	GO:0030145: manganese ion binding	1.71E-02
35	GO:0004871: signal transducer activity	1.80E-02
36	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.85E-02
37	GO:0051539: 4 iron, 4 sulfur cluster binding	2.00E-02
38	GO:0003824: catalytic activity	2.16E-02
39	GO:0004185: serine-type carboxypeptidase activity	2.18E-02
40	GO:0009055: electron carrier activity	2.27E-02
41	GO:0051537: 2 iron, 2 sulfur cluster binding	2.31E-02
42	GO:0043621: protein self-association	2.31E-02
43	GO:0015293: symporter activity	2.37E-02
44	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.44E-02
45	GO:0046983: protein dimerization activity	2.77E-02
46	GO:0015171: amino acid transmembrane transporter activity	2.90E-02
47	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.25E-02
48	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.25E-02
49	GO:0016874: ligase activity	3.32E-02
50	GO:0020037: heme binding	3.40E-02
51	GO:0000166: nucleotide binding	3.75E-02
52	GO:0016758: transferase activity, transferring hexosyl groups	3.99E-02
53	GO:0004252: serine-type endopeptidase activity	4.38E-02
54	GO:0030170: pyridoxal phosphate binding	4.38E-02
55	GO:0005515: protein binding	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0000791: euchromatin	9.88E-05
3	GO:0030870: Mre11 complex	2.32E-04
4	GO:0010007: magnesium chelatase complex	3.86E-04
5	GO:0009531: secondary cell wall	5.54E-04
6	GO:0000795: synaptonemal complex	9.32E-04
7	GO:0031305: integral component of mitochondrial inner membrane	1.84E-03
8	GO:0005874: microtubule	2.22E-03
9	GO:0045298: tubulin complex	2.37E-03
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.37E-03
11	GO:0055028: cortical microtubule	2.95E-03
12	GO:0005740: mitochondrial envelope	2.95E-03
13	GO:0009570: chloroplast stroma	9.23E-03
14	GO:0000785: chromatin	1.03E-02
15	GO:0009535: chloroplast thylakoid membrane	1.54E-02
16	GO:0005576: extracellular region	1.57E-02
17	GO:0009505: plant-type cell wall	2.55E-02
18	GO:0009507: chloroplast	2.60E-02
19	GO:0005834: heterotrimeric G-protein complex	3.18E-02
20	GO:0005618: cell wall	3.58E-02
21	GO:0009543: chloroplast thylakoid lumen	4.07E-02