GO Enrichment Analysis of Co-expressed Genes with
AT3G15010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006364: rRNA processing | 3.86E-08 |
| 2 | GO:0000028: ribosomal small subunit assembly | 1.55E-06 |
| 3 | GO:0006407: rRNA export from nucleus | 1.04E-05 |
| 4 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.04E-05 |
| 5 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.04E-05 |
| 6 | GO:0043985: histone H4-R3 methylation | 1.04E-05 |
| 7 | GO:0010501: RNA secondary structure unwinding | 2.67E-05 |
| 8 | GO:0034470: ncRNA processing | 2.78E-05 |
| 9 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.78E-05 |
| 10 | GO:0006421: asparaginyl-tRNA aminoacylation | 5.03E-05 |
| 11 | GO:0007276: gamete generation | 7.70E-05 |
| 12 | GO:0006479: protein methylation | 1.07E-04 |
| 13 | GO:0042273: ribosomal large subunit biogenesis | 1.07E-04 |
| 14 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.11E-04 |
| 15 | GO:0016444: somatic cell DNA recombination | 2.11E-04 |
| 16 | GO:0009553: embryo sac development | 2.61E-04 |
| 17 | GO:0010030: positive regulation of seed germination | 7.02E-04 |
| 18 | GO:0042254: ribosome biogenesis | 7.18E-04 |
| 19 | GO:0006406: mRNA export from nucleus | 8.05E-04 |
| 20 | GO:0051302: regulation of cell division | 8.59E-04 |
| 21 | GO:0006334: nucleosome assembly | 9.11E-04 |
| 22 | GO:0009294: DNA mediated transformation | 1.02E-03 |
| 23 | GO:0006974: cellular response to DNA damage stimulus | 1.97E-03 |
| 24 | GO:0000724: double-strand break repair via homologous recombination | 2.48E-03 |
| 25 | GO:0006417: regulation of translation | 3.98E-03 |
| 26 | GO:0016569: covalent chromatin modification | 4.54E-03 |
| 27 | GO:0000398: mRNA splicing, via spliceosome | 5.22E-03 |
| 28 | GO:0009790: embryo development | 6.14E-03 |
| 29 | GO:0007166: cell surface receptor signaling pathway | 7.56E-03 |
| 30 | GO:0010468: regulation of gene expression | 7.79E-03 |
| 31 | GO:0045892: negative regulation of transcription, DNA-templated | 1.25E-02 |
| 32 | GO:0032259: methylation | 1.39E-02 |
| 33 | GO:0006281: DNA repair | 1.43E-02 |
| 34 | GO:0009555: pollen development | 2.15E-02 |
| 35 | GO:0009414: response to water deprivation | 3.50E-02 |
| 36 | GO:0046686: response to cadmium ion | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000166: nucleotide binding | 2.70E-07 |
| 2 | GO:0001054: RNA polymerase I activity | 4.91E-06 |
| 3 | GO:0043021: ribonucleoprotein complex binding | 2.78E-05 |
| 4 | GO:0004816: asparagine-tRNA ligase activity | 5.03E-05 |
| 5 | GO:0004004: ATP-dependent RNA helicase activity | 7.03E-05 |
| 6 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.87E-04 |
| 7 | GO:0003723: RNA binding | 2.03E-04 |
| 8 | GO:0030515: snoRNA binding | 2.50E-04 |
| 9 | GO:0008026: ATP-dependent helicase activity | 2.86E-04 |
| 10 | GO:0001056: RNA polymerase III activity | 5.55E-04 |
| 11 | GO:0003725: double-stranded RNA binding | 6.04E-04 |
| 12 | GO:0008168: methyltransferase activity | 6.79E-04 |
| 13 | GO:0004407: histone deacetylase activity | 8.05E-04 |
| 14 | GO:0016887: ATPase activity | 1.91E-03 |
| 15 | GO:0003697: single-stranded DNA binding | 2.56E-03 |
| 16 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.64E-03 |
| 17 | GO:0042393: histone binding | 2.80E-03 |
| 18 | GO:0003676: nucleic acid binding | 2.98E-03 |
| 19 | GO:0003690: double-stranded DNA binding | 3.81E-03 |
| 20 | GO:0004386: helicase activity | 5.02E-03 |
| 21 | GO:0042802: identical protein binding | 8.14E-03 |
| 22 | GO:0016787: hydrolase activity | 9.32E-03 |
| 23 | GO:0003682: chromatin binding | 9.72E-03 |
| 24 | GO:0005524: ATP binding | 1.35E-02 |
| 25 | GO:0003924: GTPase activity | 1.43E-02 |
| 26 | GO:0003677: DNA binding | 2.93E-02 |
| 27 | GO:0008270: zinc ion binding | 2.98E-02 |
| 28 | GO:0046983: protein dimerization activity | 4.37E-02 |
| 29 | GO:0003729: mRNA binding | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 1.59E-10 |
| 2 | GO:0030687: preribosome, large subunit precursor | 1.14E-06 |
| 3 | GO:0005736: DNA-directed RNA polymerase I complex | 2.61E-06 |
| 4 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 1.04E-05 |
| 5 | GO:0030686: 90S preribosome | 1.04E-05 |
| 6 | GO:0005634: nucleus | 2.12E-05 |
| 7 | GO:0070545: PeBoW complex | 2.78E-05 |
| 8 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.17E-05 |
| 9 | GO:0034399: nuclear periphery | 2.90E-04 |
| 10 | GO:0005666: DNA-directed RNA polymerase III complex | 4.18E-04 |
| 11 | GO:0032040: small-subunit processome | 5.55E-04 |
| 12 | GO:0015935: small ribosomal subunit | 9.11E-04 |
| 13 | GO:0030529: intracellular ribonucleoprotein complex | 1.83E-03 |
| 14 | GO:0005618: cell wall | 2.84E-03 |
| 15 | GO:0005681: spliceosomal complex | 4.17E-03 |
| 16 | GO:0005834: heterotrimeric G-protein complex | 4.35E-03 |
| 17 | GO:0005654: nucleoplasm | 5.42E-03 |
| 18 | GO:0005829: cytosol | 7.35E-03 |
| 19 | GO:0022627: cytosolic small ribosomal subunit | 8.38E-03 |
| 20 | GO:0022626: cytosolic ribosome | 2.08E-02 |
| 21 | GO:0009505: plant-type cell wall | 4.18E-02 |