GO Enrichment Analysis of Co-expressed Genes with
AT3G15000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 2 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 3 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 6 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 7 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 8 | GO:0006412: translation | 2.20E-11 |
| 9 | GO:0006364: rRNA processing | 2.33E-09 |
| 10 | GO:0042254: ribosome biogenesis | 5.67E-06 |
| 11 | GO:0006626: protein targeting to mitochondrion | 9.09E-06 |
| 12 | GO:0031167: rRNA methylation | 2.54E-05 |
| 13 | GO:0007005: mitochondrion organization | 3.17E-05 |
| 14 | GO:0006458: 'de novo' protein folding | 5.36E-05 |
| 15 | GO:0008033: tRNA processing | 5.38E-05 |
| 16 | GO:0010197: polar nucleus fusion | 6.04E-05 |
| 17 | GO:0001510: RNA methylation | 1.17E-04 |
| 18 | GO:0031120: snRNA pseudouridine synthesis | 1.37E-04 |
| 19 | GO:0031118: rRNA pseudouridine synthesis | 1.37E-04 |
| 20 | GO:0006177: GMP biosynthetic process | 1.37E-04 |
| 21 | GO:0010162: seed dormancy process | 2.04E-04 |
| 22 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.16E-04 |
| 23 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 3.16E-04 |
| 24 | GO:0045041: protein import into mitochondrial intermembrane space | 3.16E-04 |
| 25 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.93E-04 |
| 26 | GO:0045039: protein import into mitochondrial inner membrane | 5.20E-04 |
| 27 | GO:0070475: rRNA base methylation | 5.20E-04 |
| 28 | GO:0061077: chaperone-mediated protein folding | 5.96E-04 |
| 29 | GO:0009294: DNA mediated transformation | 7.07E-04 |
| 30 | GO:0009855: determination of bilateral symmetry | 7.44E-04 |
| 31 | GO:0051131: chaperone-mediated protein complex assembly | 7.44E-04 |
| 32 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 7.44E-04 |
| 33 | GO:0007004: telomere maintenance via telomerase | 7.44E-04 |
| 34 | GO:0009553: embryo sac development | 8.82E-04 |
| 35 | GO:0042273: ribosomal large subunit biogenesis | 9.85E-04 |
| 36 | GO:0000460: maturation of 5.8S rRNA | 9.85E-04 |
| 37 | GO:1900864: mitochondrial RNA modification | 9.85E-04 |
| 38 | GO:0080156: mitochondrial mRNA modification | 1.17E-03 |
| 39 | GO:0046686: response to cadmium ion | 1.35E-03 |
| 40 | GO:0000470: maturation of LSU-rRNA | 1.53E-03 |
| 41 | GO:0000741: karyogamy | 1.53E-03 |
| 42 | GO:0001731: formation of translation preinitiation complex | 1.53E-03 |
| 43 | GO:0042026: protein refolding | 1.83E-03 |
| 44 | GO:0016444: somatic cell DNA recombination | 1.83E-03 |
| 45 | GO:0080186: developmental vegetative growth | 2.15E-03 |
| 46 | GO:0001522: pseudouridine synthesis | 2.49E-03 |
| 47 | GO:0001558: regulation of cell growth | 2.85E-03 |
| 48 | GO:0007338: single fertilization | 3.22E-03 |
| 49 | GO:0048507: meristem development | 3.22E-03 |
| 50 | GO:0006189: 'de novo' IMP biosynthetic process | 3.22E-03 |
| 51 | GO:1900865: chloroplast RNA modification | 3.60E-03 |
| 52 | GO:0006259: DNA metabolic process | 4.00E-03 |
| 53 | GO:0006541: glutamine metabolic process | 5.76E-03 |
| 54 | GO:0006446: regulation of translational initiation | 5.76E-03 |
| 55 | GO:0006396: RNA processing | 6.96E-03 |
| 56 | GO:0000027: ribosomal large subunit assembly | 7.22E-03 |
| 57 | GO:0030150: protein import into mitochondrial matrix | 7.22E-03 |
| 58 | GO:0051302: regulation of cell division | 7.73E-03 |
| 59 | GO:0006334: nucleosome assembly | 8.26E-03 |
| 60 | GO:0000413: protein peptidyl-prolyl isomerization | 1.11E-02 |
| 61 | GO:0009960: endosperm development | 1.17E-02 |
| 62 | GO:0009735: response to cytokinin | 1.25E-02 |
| 63 | GO:0006635: fatty acid beta-oxidation | 1.36E-02 |
| 64 | GO:0009567: double fertilization forming a zygote and endosperm | 1.55E-02 |
| 65 | GO:0006457: protein folding | 1.94E-02 |
| 66 | GO:0016049: cell growth | 2.05E-02 |
| 67 | GO:0010311: lateral root formation | 2.20E-02 |
| 68 | GO:0006414: translational elongation | 2.32E-02 |
| 69 | GO:0048527: lateral root development | 2.36E-02 |
| 70 | GO:0000724: double-strand break repair via homologous recombination | 2.43E-02 |
| 71 | GO:0008283: cell proliferation | 3.01E-02 |
| 72 | GO:0000154: rRNA modification | 3.27E-02 |
| 73 | GO:0016569: covalent chromatin modification | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 3 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 4 | GO:0050355: triphosphatase activity | 0.00E+00 |
| 5 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 2.67E-17 |
| 7 | GO:0003723: RNA binding | 6.34E-13 |
| 8 | GO:0030515: snoRNA binding | 1.17E-11 |
| 9 | GO:0019843: rRNA binding | 5.43E-07 |
| 10 | GO:0003746: translation elongation factor activity | 6.04E-07 |
| 11 | GO:0008649: rRNA methyltransferase activity | 3.53E-06 |
| 12 | GO:0008173: RNA methyltransferase activity | 1.17E-04 |
| 13 | GO:0000166: nucleotide binding | 1.22E-04 |
| 14 | GO:0042134: rRNA primary transcript binding | 1.37E-04 |
| 15 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 1.37E-04 |
| 16 | GO:0044183: protein binding involved in protein folding | 2.39E-04 |
| 17 | GO:0070034: telomerase RNA binding | 3.16E-04 |
| 18 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 3.16E-04 |
| 19 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 3.16E-04 |
| 20 | GO:0043021: ribonucleoprotein complex binding | 3.16E-04 |
| 21 | GO:0003938: IMP dehydrogenase activity | 3.16E-04 |
| 22 | GO:0004407: histone deacetylase activity | 4.93E-04 |
| 23 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 5.20E-04 |
| 24 | GO:0051082: unfolded protein binding | 9.14E-04 |
| 25 | GO:0003729: mRNA binding | 1.24E-03 |
| 26 | GO:0031369: translation initiation factor binding | 1.53E-03 |
| 27 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.53E-03 |
| 28 | GO:0016462: pyrophosphatase activity | 1.53E-03 |
| 29 | GO:0008235: metalloexopeptidase activity | 2.15E-03 |
| 30 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.18E-03 |
| 31 | GO:0050897: cobalt ion binding | 2.51E-03 |
| 32 | GO:0003678: DNA helicase activity | 3.22E-03 |
| 33 | GO:0000049: tRNA binding | 4.85E-03 |
| 34 | GO:0009982: pseudouridine synthase activity | 5.30E-03 |
| 35 | GO:0051087: chaperone binding | 7.73E-03 |
| 36 | GO:0004176: ATP-dependent peptidase activity | 8.26E-03 |
| 37 | GO:0004812: aminoacyl-tRNA ligase activity | 1.05E-02 |
| 38 | GO:0010181: FMN binding | 1.23E-02 |
| 39 | GO:0004004: ATP-dependent RNA helicase activity | 1.98E-02 |
| 40 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.05E-02 |
| 41 | GO:0008236: serine-type peptidase activity | 2.05E-02 |
| 42 | GO:0005507: copper ion binding | 2.19E-02 |
| 43 | GO:0005524: ATP binding | 2.23E-02 |
| 44 | GO:0003697: single-stranded DNA binding | 2.51E-02 |
| 45 | GO:0042393: histone binding | 2.76E-02 |
| 46 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.76E-02 |
| 47 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.36E-02 |
| 48 | GO:0008026: ATP-dependent helicase activity | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 5 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 6 | GO:0005730: nucleolus | 7.78E-25 |
| 7 | GO:0005840: ribosome | 5.58E-12 |
| 8 | GO:0032040: small-subunit processome | 6.57E-10 |
| 9 | GO:0005739: mitochondrion | 1.72E-09 |
| 10 | GO:0015030: Cajal body | 2.78E-08 |
| 11 | GO:0031428: box C/D snoRNP complex | 2.55E-07 |
| 12 | GO:0022625: cytosolic large ribosomal subunit | 7.58E-07 |
| 13 | GO:0022626: cytosolic ribosome | 1.18E-06 |
| 14 | GO:0005747: mitochondrial respiratory chain complex I | 4.43E-06 |
| 15 | GO:0005759: mitochondrial matrix | 2.00E-05 |
| 16 | GO:0005774: vacuolar membrane | 3.69E-05 |
| 17 | GO:0005829: cytosol | 4.25E-05 |
| 18 | GO:0022627: cytosolic small ribosomal subunit | 4.76E-05 |
| 19 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 8.22E-05 |
| 20 | GO:0005834: heterotrimeric G-protein complex | 8.23E-05 |
| 21 | GO:0015934: large ribosomal subunit | 2.55E-04 |
| 22 | GO:0070545: PeBoW complex | 3.16E-04 |
| 23 | GO:0005758: mitochondrial intermembrane space | 4.93E-04 |
| 24 | GO:0031429: box H/ACA snoRNP complex | 7.44E-04 |
| 25 | GO:0005618: cell wall | 8.71E-04 |
| 26 | GO:0000178: exosome (RNase complex) | 1.25E-03 |
| 27 | GO:0016282: eukaryotic 43S preinitiation complex | 1.53E-03 |
| 28 | GO:0016363: nuclear matrix | 1.83E-03 |
| 29 | GO:0033290: eukaryotic 48S preinitiation complex | 1.83E-03 |
| 30 | GO:0030687: preribosome, large subunit precursor | 2.15E-03 |
| 31 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.42E-03 |
| 32 | GO:0019013: viral nucleocapsid | 5.30E-03 |
| 33 | GO:0005743: mitochondrial inner membrane | 6.16E-03 |
| 34 | GO:0015935: small ribosomal subunit | 8.26E-03 |
| 35 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 9.92E-03 |
| 36 | GO:0009536: plastid | 1.24E-02 |
| 37 | GO:0016592: mediator complex | 1.42E-02 |
| 38 | GO:0005773: vacuole | 1.49E-02 |
| 39 | GO:0030529: intracellular ribonucleoprotein complex | 1.76E-02 |
| 40 | GO:0009506: plasmodesma | 3.52E-02 |
| 41 | GO:0005681: spliceosomal complex | 4.19E-02 |
| 42 | GO:0005737: cytoplasm | 4.32E-02 |