Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G14415

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0098586: cellular response to virus0.00E+00
2GO:0017009: protein-phycocyanobilin linkage0.00E+00
3GO:0009735: response to cytokinin6.46E-06
4GO:0048564: photosystem I assembly7.91E-06
5GO:0018298: protein-chromophore linkage8.77E-06
6GO:0009658: chloroplast organization1.27E-05
7GO:0015979: photosynthesis2.56E-05
8GO:1904966: positive regulation of vitamin E biosynthetic process2.88E-05
9GO:1904964: positive regulation of phytol biosynthetic process2.88E-05
10GO:0010362: negative regulation of anion channel activity by blue light2.88E-05
11GO:0019253: reductive pentose-phosphate cycle3.80E-05
12GO:0080005: photosystem stoichiometry adjustment7.28E-05
13GO:0080183: response to photooxidative stress7.28E-05
14GO:0046741: transport of virus in host, tissue to tissue7.28E-05
15GO:1902326: positive regulation of chlorophyll biosynthetic process7.28E-05
16GO:0006013: mannose metabolic process1.27E-04
17GO:0043572: plastid fission1.89E-04
18GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.89E-04
19GO:0009902: chloroplast relocation2.57E-04
20GO:0035434: copper ion transmembrane transport3.30E-04
21GO:0043097: pyrimidine nucleoside salvage3.30E-04
22GO:0009637: response to blue light3.80E-04
23GO:0010190: cytochrome b6f complex assembly4.06E-04
24GO:0009643: photosynthetic acclimation4.06E-04
25GO:0006206: pyrimidine nucleobase metabolic process4.06E-04
26GO:0015977: carbon fixation4.86E-04
27GO:0009642: response to light intensity6.55E-04
28GO:0009638: phototropism9.29E-04
29GO:0045036: protein targeting to chloroplast1.03E-03
30GO:0018119: peptidyl-cysteine S-nitrosylation1.13E-03
31GO:0009767: photosynthetic electron transport chain1.34E-03
32GO:0010207: photosystem II assembly1.45E-03
33GO:0010020: chloroplast fission1.45E-03
34GO:0007623: circadian rhythm1.53E-03
35GO:0006825: copper ion transport1.92E-03
36GO:0051302: regulation of cell division1.92E-03
37GO:0016226: iron-sulfur cluster assembly2.17E-03
38GO:0010118: stomatal movement2.70E-03
39GO:0046777: protein autophosphorylation3.09E-03
40GO:0009791: post-embryonic development3.13E-03
41GO:0000302: response to reactive oxygen species3.28E-03
42GO:0010286: heat acclimation3.89E-03
43GO:0009816: defense response to bacterium, incompatible interaction4.37E-03
44GO:0015995: chlorophyll biosynthetic process4.71E-03
45GO:0000160: phosphorelay signal transduction system5.22E-03
46GO:0010218: response to far red light5.40E-03
47GO:0007568: aging5.58E-03
48GO:0009853: photorespiration5.94E-03
49GO:0010114: response to red light7.08E-03
50GO:0009744: response to sucrose7.08E-03
51GO:0009644: response to high light intensity7.48E-03
52GO:0009416: response to light stimulus7.51E-03
53GO:0042538: hyperosmotic salinity response8.29E-03
54GO:0055085: transmembrane transport9.54E-03
55GO:0009058: biosynthetic process1.36E-02
56GO:0010228: vegetative to reproductive phase transition of meristem1.70E-02
57GO:0010468: regulation of gene expression1.86E-02
58GO:0009409: response to cold2.07E-02
59GO:0007049: cell cycle2.42E-02
60GO:0008152: metabolic process3.70E-02
RankGO TermAdjusted P value
1GO:0008974: phosphoribulokinase activity0.00E+00
2GO:0030941: chloroplast targeting sequence binding2.88E-05
3GO:0022891: substrate-specific transmembrane transporter activity8.61E-05
4GO:0032947: protein complex scaffold1.27E-04
5GO:0009882: blue light photoreceptor activity1.89E-04
6GO:0016984: ribulose-bisphosphate carboxylase activity1.89E-04
7GO:0016851: magnesium chelatase activity1.89E-04
8GO:0016168: chlorophyll binding2.42E-04
9GO:0051861: glycolipid binding2.57E-04
10GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.57E-04
11GO:0043495: protein anchor2.57E-04
12GO:0004849: uridine kinase activity4.86E-04
13GO:0004559: alpha-mannosidase activity4.86E-04
14GO:0019899: enzyme binding5.68E-04
15GO:0005375: copper ion transmembrane transporter activity7.44E-04
16GO:0000155: phosphorelay sensor kinase activity1.34E-03
17GO:0051536: iron-sulfur cluster binding1.79E-03
18GO:0042802: identical protein binding1.93E-03
19GO:0005506: iron ion binding2.44E-03
20GO:0010181: FMN binding2.99E-03
21GO:0048038: quinone binding3.28E-03
22GO:0016597: amino acid binding4.05E-03
23GO:0009055: electron carrier activity4.55E-03
24GO:0051537: 2 iron, 2 sulfur cluster binding7.48E-03
25GO:0005198: structural molecule activity7.68E-03
26GO:0016746: transferase activity, transferring acyl groups1.14E-02
27GO:0016829: lyase activity1.38E-02
28GO:0004497: monooxygenase activity2.61E-02
29GO:0016887: ATPase activity4.71E-02
30GO:0003674: molecular_function4.91E-02
RankGO TermAdjusted P value
1GO:0009535: chloroplast thylakoid membrane6.07E-18
2GO:0009507: chloroplast9.09E-16
3GO:0009579: thylakoid2.08E-08
4GO:0009570: chloroplast stroma4.49E-08
5GO:0009941: chloroplast envelope2.27E-05
6GO:0009573: chloroplast ribulose bisphosphate carboxylase complex1.27E-04
7GO:0010007: magnesium chelatase complex1.27E-04
8GO:0009523: photosystem II1.44E-04
9GO:0010319: stromule2.02E-04
10GO:0009707: chloroplast outer membrane3.00E-04
11GO:0031359: integral component of chloroplast outer membrane5.68E-04
12GO:0009539: photosystem II reaction center7.44E-04
13GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)8.35E-04
14GO:0009534: chloroplast thylakoid1.30E-03
15GO:0042651: thylakoid membrane1.92E-03
16GO:0009654: photosystem II oxygen evolving complex1.92E-03
17GO:0031977: thylakoid lumen6.69E-03
18GO:0048046: apoplast1.28E-02
19GO:0009543: chloroplast thylakoid lumen1.31E-02
20GO:0031969: chloroplast membrane2.61E-02
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Gene type



Gene DE type