Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G14110

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905421: regulation of plant organ morphogenesis0.00E+00
2GO:0002184: cytoplasmic translational termination0.00E+00
3GO:0030155: regulation of cell adhesion0.00E+00
4GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
5GO:0061635: regulation of protein complex stability0.00E+00
6GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
7GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
8GO:0005996: monosaccharide metabolic process0.00E+00
9GO:0090279: regulation of calcium ion import0.00E+00
10GO:0006114: glycerol biosynthetic process0.00E+00
11GO:0018023: peptidyl-lysine trimethylation0.00E+00
12GO:0071474: cellular hyperosmotic response0.00E+00
13GO:0015979: photosynthesis4.09E-24
14GO:0032544: plastid translation1.45E-13
15GO:0006412: translation5.85E-12
16GO:0010027: thylakoid membrane organization3.84E-10
17GO:0010206: photosystem II repair7.54E-09
18GO:0009735: response to cytokinin9.73E-09
19GO:0009773: photosynthetic electron transport in photosystem I3.38E-08
20GO:0042254: ribosome biogenesis5.14E-08
21GO:0010207: photosystem II assembly5.18E-06
22GO:0009658: chloroplast organization6.44E-06
23GO:0030388: fructose 1,6-bisphosphate metabolic process7.60E-06
24GO:0018026: peptidyl-lysine monomethylation7.60E-06
25GO:0015995: chlorophyll biosynthetic process1.44E-05
26GO:0061077: chaperone-mediated protein folding1.65E-05
27GO:0006000: fructose metabolic process2.63E-05
28GO:0019684: photosynthesis, light reaction7.35E-05
29GO:0019464: glycine decarboxylation via glycine cleavage system1.01E-04
30GO:0006109: regulation of carbohydrate metabolic process1.01E-04
31GO:0016311: dephosphorylation1.99E-04
32GO:0042549: photosystem II stabilization2.23E-04
33GO:0009768: photosynthesis, light harvesting in photosystem I2.47E-04
34GO:0009409: response to cold3.65E-04
35GO:0010196: nonphotochemical quenching3.88E-04
36GO:0080093: regulation of photorespiration4.13E-04
37GO:0046167: glycerol-3-phosphate biosynthetic process4.13E-04
38GO:0043007: maintenance of rDNA4.13E-04
39GO:0031998: regulation of fatty acid beta-oxidation4.13E-04
40GO:1902458: positive regulation of stomatal opening4.13E-04
41GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process4.13E-04
42GO:0000476: maturation of 4.5S rRNA4.13E-04
43GO:0000967: rRNA 5'-end processing4.13E-04
44GO:0043953: protein transport by the Tat complex4.13E-04
45GO:0042371: vitamin K biosynthetic process4.13E-04
46GO:0065002: intracellular protein transmembrane transport4.13E-04
47GO:0043686: co-translational protein modification4.13E-04
48GO:0005978: glycogen biosynthetic process4.85E-04
49GO:0006002: fructose 6-phosphate metabolic process5.92E-04
50GO:1903426: regulation of reactive oxygen species biosynthetic process8.93E-04
51GO:0051262: protein tetramerization8.93E-04
52GO:0034470: ncRNA processing8.93E-04
53GO:0035304: regulation of protein dephosphorylation8.93E-04
54GO:0019388: galactose catabolic process8.93E-04
55GO:0006650: glycerophospholipid metabolic process8.93E-04
56GO:0006782: protoporphyrinogen IX biosynthetic process9.73E-04
57GO:0043085: positive regulation of catalytic activity1.12E-03
58GO:0005983: starch catabolic process1.28E-03
59GO:0045037: protein import into chloroplast stroma1.28E-03
60GO:0016050: vesicle organization1.45E-03
61GO:0006094: gluconeogenesis1.45E-03
62GO:0005986: sucrose biosynthetic process1.45E-03
63GO:0048281: inflorescence morphogenesis1.45E-03
64GO:0046168: glycerol-3-phosphate catabolic process1.45E-03
65GO:0006518: peptide metabolic process1.45E-03
66GO:0042742: defense response to bacterium1.52E-03
67GO:0018298: protein-chromophore linkage1.57E-03
68GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.10E-03
69GO:0071484: cellular response to light intensity2.10E-03
70GO:0006072: glycerol-3-phosphate metabolic process2.10E-03
71GO:0010306: rhamnogalacturonan II biosynthetic process2.10E-03
72GO:0010731: protein glutathionylation2.10E-03
73GO:0010148: transpiration2.10E-03
74GO:0009590: detection of gravity2.10E-03
75GO:0006808: regulation of nitrogen utilization2.82E-03
76GO:0015976: carbon utilization2.82E-03
77GO:0045727: positive regulation of translation2.82E-03
78GO:0015994: chlorophyll metabolic process2.82E-03
79GO:0006546: glycine catabolic process2.82E-03
80GO:0006552: leucine catabolic process2.82E-03
81GO:0010021: amylopectin biosynthetic process2.82E-03
82GO:0031365: N-terminal protein amino acid modification3.61E-03
83GO:0006097: glyoxylate cycle3.61E-03
84GO:0006461: protein complex assembly3.61E-03
85GO:0016120: carotene biosynthetic process3.61E-03
86GO:0010236: plastoquinone biosynthetic process3.61E-03
87GO:0045038: protein import into chloroplast thylakoid membrane3.61E-03
88GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.47E-03
89GO:0000470: maturation of LSU-rRNA4.47E-03
90GO:0042793: transcription from plastid promoter4.47E-03
91GO:0010190: cytochrome b6f complex assembly4.47E-03
92GO:0006662: glycerol ether metabolic process4.52E-03
93GO:0019252: starch biosynthetic process5.21E-03
94GO:0009955: adaxial/abaxial pattern specification5.38E-03
95GO:0042372: phylloquinone biosynthetic process5.38E-03
96GO:0042026: protein refolding5.38E-03
97GO:0006458: 'de novo' protein folding5.38E-03
98GO:1901259: chloroplast rRNA processing5.38E-03
99GO:0030488: tRNA methylation5.38E-03
100GO:0010103: stomatal complex morphogenesis6.36E-03
101GO:0009772: photosynthetic electron transport in photosystem II6.36E-03
102GO:0070370: cellular heat acclimation6.36E-03
103GO:0009645: response to low light intensity stimulus6.36E-03
104GO:0022904: respiratory electron transport chain6.36E-03
105GO:0009642: response to light intensity7.40E-03
106GO:2000070: regulation of response to water deprivation7.40E-03
107GO:0015996: chlorophyll catabolic process8.49E-03
108GO:0001558: regulation of cell growth8.49E-03
109GO:0007186: G-protein coupled receptor signaling pathway8.49E-03
110GO:0009657: plastid organization8.49E-03
111GO:0006783: heme biosynthetic process9.65E-03
112GO:0006810: transport1.04E-02
113GO:0045454: cell redox homeostasis1.07E-02
114GO:0005982: starch metabolic process1.09E-02
115GO:0010205: photoinhibition1.09E-02
116GO:0006779: porphyrin-containing compound biosynthetic process1.09E-02
117GO:0009790: embryo development1.10E-02
118GO:0031627: telomeric loop formation1.21E-02
119GO:0043069: negative regulation of programmed cell death1.21E-02
120GO:0048829: root cap development1.21E-02
121GO:0010015: root morphogenesis1.34E-02
122GO:0009089: lysine biosynthetic process via diaminopimelate1.34E-02
123GO:0009073: aromatic amino acid family biosynthetic process1.34E-02
124GO:0006415: translational termination1.34E-02
125GO:0000272: polysaccharide catabolic process1.34E-02
126GO:0009750: response to fructose1.34E-02
127GO:0018119: peptidyl-cysteine S-nitrosylation1.34E-02
128GO:0034599: cellular response to oxidative stress1.41E-02
129GO:0006631: fatty acid metabolic process1.60E-02
130GO:0009767: photosynthetic electron transport chain1.62E-02
131GO:0010102: lateral root morphogenesis1.62E-02
132GO:0010628: positive regulation of gene expression1.62E-02
133GO:0006108: malate metabolic process1.62E-02
134GO:0006006: glucose metabolic process1.62E-02
135GO:0006302: double-strand break repair1.76E-02
136GO:0019253: reductive pentose-phosphate cycle1.76E-02
137GO:0005985: sucrose metabolic process1.91E-02
138GO:0009944: polarity specification of adaxial/abaxial axis2.22E-02
139GO:0000027: ribosomal large subunit assembly2.22E-02
140GO:0006289: nucleotide-excision repair2.22E-02
141GO:0006364: rRNA processing2.34E-02
142GO:0051302: regulation of cell division2.38E-02
143GO:0007017: microtubule-based process2.38E-02
144GO:0019915: lipid storage2.55E-02
145GO:0051321: meiotic cell cycle2.55E-02
146GO:0043086: negative regulation of catalytic activity2.77E-02
147GO:0009686: gibberellin biosynthetic process2.89E-02
148GO:0071369: cellular response to ethylene stimulus2.89E-02
149GO:0001944: vasculature development2.89E-02
150GO:0005975: carbohydrate metabolic process2.91E-02
151GO:0009561: megagametogenesis3.07E-02
152GO:0016117: carotenoid biosynthetic process3.25E-02
153GO:0042631: cellular response to water deprivation3.44E-02
154GO:0010182: sugar mediated signaling pathway3.63E-02
155GO:0048868: pollen tube development3.63E-02
156GO:0006520: cellular amino acid metabolic process3.63E-02
157GO:0009646: response to absence of light3.82E-02
158GO:0008654: phospholipid biosynthetic process4.01E-02
159GO:0071554: cell wall organization or biogenesis4.21E-02
160GO:1901657: glycosyl compound metabolic process4.62E-02
161GO:0030163: protein catabolic process4.62E-02
162GO:0009567: double fertilization forming a zygote and endosperm4.83E-02
RankGO TermAdjusted P value
1GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor0.00E+00
2GO:0043136: glycerol-3-phosphatase activity0.00E+00
3GO:0000121: glycerol-1-phosphatase activity0.00E+00
4GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
5GO:0004174: electron-transferring-flavoprotein dehydrogenase activity0.00E+00
6GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
7GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
8GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
9GO:0016166: phytoene dehydrogenase activity0.00E+00
10GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
11GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
12GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
13GO:0048039: ubiquinone binding0.00E+00
14GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
15GO:0009899: ent-kaurene synthase activity0.00E+00
16GO:0019843: rRNA binding1.84E-21
17GO:0003735: structural constituent of ribosome1.27E-13
18GO:0005528: FK506 binding8.47E-11
19GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.08E-07
20GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity7.60E-06
21GO:0004375: glycine dehydrogenase (decarboxylating) activity5.73E-05
22GO:0016851: magnesium chelatase activity5.73E-05
23GO:0016279: protein-lysine N-methyltransferase activity1.01E-04
24GO:0008266: poly(U) RNA binding1.33E-04
25GO:0031409: pigment binding1.85E-04
26GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity4.13E-04
27GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.13E-04
28GO:0005227: calcium activated cation channel activity4.13E-04
29GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity4.13E-04
30GO:0080132: fatty acid alpha-hydroxylase activity4.13E-04
31GO:0050308: sugar-phosphatase activity4.13E-04
32GO:0010242: oxygen evolving activity4.13E-04
33GO:0019203: carbohydrate phosphatase activity4.13E-04
34GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity4.13E-04
35GO:0004853: uroporphyrinogen decarboxylase activity4.13E-04
36GO:0042586: peptide deformylase activity4.13E-04
37GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.13E-04
38GO:0047746: chlorophyllase activity8.93E-04
39GO:0010297: heteropolysaccharide binding8.93E-04
40GO:0009977: proton motive force dependent protein transmembrane transporter activity8.93E-04
41GO:0003844: 1,4-alpha-glucan branching enzyme activity8.93E-04
42GO:0004614: phosphoglucomutase activity8.93E-04
43GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.93E-04
44GO:0008967: phosphoglycolate phosphatase activity8.93E-04
45GO:0008047: enzyme activator activity9.73E-04
46GO:0044183: protein binding involved in protein folding1.12E-03
47GO:0016168: chlorophyll binding1.21E-03
48GO:0051082: unfolded protein binding1.30E-03
49GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.45E-03
50GO:0031072: heat shock protein binding1.45E-03
51GO:0004324: ferredoxin-NADP+ reductase activity1.45E-03
52GO:0043169: cation binding1.45E-03
53GO:0017150: tRNA dihydrouridine synthase activity1.45E-03
54GO:0005504: fatty acid binding1.45E-03
55GO:0045174: glutathione dehydrogenase (ascorbate) activity1.45E-03
56GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity2.10E-03
57GO:0016149: translation release factor activity, codon specific2.10E-03
58GO:0043023: ribosomal large subunit binding2.10E-03
59GO:0003993: acid phosphatase activity2.26E-03
60GO:0004857: enzyme inhibitor activity2.27E-03
61GO:0004659: prenyltransferase activity2.82E-03
62GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.82E-03
63GO:0080032: methyl jasmonate esterase activity2.82E-03
64GO:0045430: chalcone isomerase activity2.82E-03
65GO:0019199: transmembrane receptor protein kinase activity2.82E-03
66GO:0042277: peptide binding2.82E-03
67GO:0016491: oxidoreductase activity2.94E-03
68GO:0030570: pectate lyase activity3.29E-03
69GO:0003959: NADPH dehydrogenase activity3.61E-03
70GO:0005509: calcium ion binding3.82E-03
71GO:0047134: protein-disulfide reductase activity3.87E-03
72GO:2001070: starch binding4.47E-03
73GO:0080030: methyl indole-3-acetate esterase activity4.47E-03
74GO:0016615: malate dehydrogenase activity4.47E-03
75GO:0004791: thioredoxin-disulfide reductase activity4.85E-03
76GO:0051920: peroxiredoxin activity5.38E-03
77GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.38E-03
78GO:0030060: L-malate dehydrogenase activity5.38E-03
79GO:0005261: cation channel activity5.38E-03
80GO:0048038: quinone binding5.58E-03
81GO:0000287: magnesium ion binding5.69E-03
82GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.36E-03
83GO:0016209: antioxidant activity7.40E-03
84GO:0004033: aldo-keto reductase (NADP) activity7.40E-03
85GO:0008173: RNA methyltransferase activity8.49E-03
86GO:0003747: translation release factor activity9.65E-03
87GO:0008138: protein tyrosine/serine/threonine phosphatase activity9.65E-03
88GO:0008236: serine-type peptidase activity1.00E-02
89GO:0004252: serine-type endopeptidase activity1.03E-02
90GO:0004222: metalloendopeptidase activity1.17E-02
91GO:0047372: acylglycerol lipase activity1.34E-02
92GO:0003691: double-stranded telomeric DNA binding1.34E-02
93GO:0004089: carbonate dehydratase activity1.62E-02
94GO:0004565: beta-galactosidase activity1.62E-02
95GO:0009055: electron carrier activity1.63E-02
96GO:0008408: 3'-5' exonuclease activity2.55E-02
97GO:0003964: RNA-directed DNA polymerase activity2.55E-02
98GO:0003756: protein disulfide isomerase activity3.07E-02
99GO:0015035: protein disulfide oxidoreductase activity3.44E-02
100GO:0050662: coenzyme binding3.82E-02
101GO:0004722: protein serine/threonine phosphatase activity4.33E-02
102GO:0016829: lyase activity4.51E-02
RankGO TermAdjusted P value
1GO:0042579: microbody0.00E+00
2GO:0017133: mitochondrial electron transfer flavoprotein complex0.00E+00
3GO:0043235: receptor complex0.00E+00
4GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
5GO:0044391: ribosomal subunit0.00E+00
6GO:0009507: chloroplast7.74E-89
7GO:0009570: chloroplast stroma1.55E-57
8GO:0009534: chloroplast thylakoid7.70E-56
9GO:0009535: chloroplast thylakoid membrane8.37E-55
10GO:0009941: chloroplast envelope2.20E-47
11GO:0009579: thylakoid4.51E-43
12GO:0009543: chloroplast thylakoid lumen1.10E-31
13GO:0031977: thylakoid lumen1.37E-25
14GO:0010287: plastoglobule1.94E-15
15GO:0005840: ribosome2.13E-15
16GO:0030095: chloroplast photosystem II2.01E-13
17GO:0009538: photosystem I reaction center1.22E-11
18GO:0009654: photosystem II oxygen evolving complex1.29E-10
19GO:0019898: extrinsic component of membrane2.53E-09
20GO:0010319: stromule2.84E-07
21GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.60E-07
22GO:0000427: plastid-encoded plastid RNA polymerase complex7.60E-06
23GO:0010007: magnesium chelatase complex2.63E-05
24GO:0005960: glycine cleavage complex5.73E-05
25GO:0009295: nucleoid1.11E-04
26GO:0009508: plastid chromosome1.11E-04
27GO:0048046: apoplast1.26E-04
28GO:0009533: chloroplast stromal thylakoid3.88E-04
29GO:0031361: integral component of thylakoid membrane4.13E-04
30GO:0009782: photosystem I antenna complex4.13E-04
31GO:0000791: euchromatin4.13E-04
32GO:0009783: photosystem II antenna complex4.13E-04
33GO:0009522: photosystem I5.95E-04
34GO:0009536: plastid8.48E-04
35GO:0030870: Mre11 complex8.93E-04
36GO:0009706: chloroplast inner membrane1.30E-03
37GO:0009528: plastid inner membrane1.45E-03
38GO:0033281: TAT protein transport complex1.45E-03
39GO:0009509: chromoplast1.45E-03
40GO:0030076: light-harvesting complex1.83E-03
41GO:0015934: large ribosomal subunit1.90E-03
42GO:0009331: glycerol-3-phosphate dehydrogenase complex2.10E-03
43GO:0042651: thylakoid membrane2.50E-03
44GO:0015935: small ribosomal subunit2.75E-03
45GO:0009532: plastid stroma2.75E-03
46GO:0009527: plastid outer membrane2.82E-03
47GO:0055035: plastid thylakoid membrane3.61E-03
48GO:0000795: synaptonemal complex3.61E-03
49GO:0009523: photosystem II5.21E-03
50GO:0009840: chloroplastic endopeptidase Clp complex5.38E-03
51GO:0016272: prefoldin complex5.38E-03
52GO:0009501: amyloplast7.40E-03
53GO:0031305: integral component of mitochondrial inner membrane7.40E-03
54GO:0031969: chloroplast membrane8.13E-03
55GO:0000783: nuclear telomere cap complex8.49E-03
56GO:0005763: mitochondrial small ribosomal subunit9.65E-03
57GO:0045298: tubulin complex9.65E-03
58GO:0016020: membrane9.82E-03
59GO:0055028: cortical microtubule1.21E-02
60GO:0005740: mitochondrial envelope1.21E-02
61GO:0005578: proteinaceous extracellular matrix1.62E-02
62GO:0000312: plastid small ribosomal subunit1.76E-02
63GO:0022625: cytosolic large ribosomal subunit3.30E-02
64GO:0005623: cell4.28E-02
65GO:0000785: chromatin4.41E-02
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Gene type



Gene DE type