co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G13790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080053: response to phenylalanine	0.00E+00
2	GO:0045730: respiratory burst	0.00E+00
3	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
4	GO:0043201: response to leucine	0.00E+00
5	GO:0080052: response to histidine	0.00E+00
6	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.51E-06
7	GO:0009808: lignin metabolic process	7.19E-06
8	GO:0009699: phenylpropanoid biosynthetic process	7.19E-06
9	GO:0051014: actin filament severing	2.30E-05
10	GO:0046244: salicylic acid catabolic process	2.30E-05
11	GO:0099636: cytoplasmic streaming	2.30E-05
12	GO:0080173: male-female gamete recognition during double fertilization	2.30E-05
13	GO:0080147: root hair cell development	4.04E-05
14	GO:0042939: tripeptide transport	5.89E-05
15	GO:0030187: melatonin biosynthetic process	5.89E-05
16	GO:0051262: protein tetramerization	5.89E-05
17	GO:0019521: D-gluconate metabolic process	5.89E-05
18	GO:0009800: cinnamic acid biosynthetic process	1.55E-04
19	GO:0042938: dipeptide transport	2.12E-04
20	GO:0051764: actin crosslink formation	2.12E-04
21	GO:0033356: UDP-L-arabinose metabolic process	2.12E-04
22	GO:0009832: plant-type cell wall biogenesis	2.37E-04
23	GO:0006559: L-phenylalanine catabolic process	3.37E-04
24	GO:0015977: carbon fixation	4.04E-04
25	GO:0009423: chorismate biosynthetic process	4.04E-04
26	GO:0098869: cellular oxidant detoxification	4.74E-04
27	GO:0006744: ubiquinone biosynthetic process	4.74E-04
28	GO:0051693: actin filament capping	4.74E-04
29	GO:0071669: plant-type cell wall organization or biogenesis	4.74E-04
30	GO:0009819: drought recovery	5.46E-04
31	GO:0009932: cell tip growth	6.21E-04
32	GO:0006098: pentose-phosphate shunt	6.98E-04
33	GO:0009555: pollen development	7.28E-04
34	GO:0009611: response to wounding	7.47E-04
35	GO:0030042: actin filament depolymerization	7.77E-04
36	GO:0006032: chitin catabolic process	8.59E-04
37	GO:0051555: flavonol biosynthetic process	8.59E-04
38	GO:0009073: aromatic amino acid family biosynthetic process	9.42E-04
39	GO:0009698: phenylpropanoid metabolic process	9.42E-04
40	GO:0016036: cellular response to phosphate starvation	1.09E-03
41	GO:0030036: actin cytoskeleton organization	1.12E-03
42	GO:0046274: lignin catabolic process	1.12E-03
43	GO:0055046: microgametogenesis	1.12E-03
44	GO:0007015: actin filament organization	1.20E-03
45	GO:0010053: root epidermal cell differentiation	1.30E-03
46	GO:0051017: actin filament bundle assembly	1.49E-03
47	GO:0007010: cytoskeleton organization	1.49E-03
48	GO:0016998: cell wall macromolecule catabolic process	1.70E-03
49	GO:0048511: rhythmic process	1.70E-03
50	GO:0042742: defense response to bacterium	1.74E-03
51	GO:0040007: growth	1.91E-03
52	GO:0009561: megagametogenesis	2.02E-03
53	GO:0080167: response to karrikin	2.19E-03
54	GO:0034220: ion transmembrane transport	2.24E-03
55	GO:0009741: response to brassinosteroid	2.36E-03
56	GO:0032502: developmental process	2.84E-03
57	GO:0016579: protein deubiquitination	3.35E-03
58	GO:0009753: response to jasmonic acid	3.44E-03
59	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.62E-03
60	GO:0006888: ER to Golgi vesicle-mediated transport	3.89E-03
61	GO:0055114: oxidation-reduction process	4.16E-03
62	GO:0030244: cellulose biosynthetic process	4.17E-03
63	GO:0048767: root hair elongation	4.32E-03
64	GO:0006099: tricarboxylic acid cycle	5.05E-03
65	GO:0006468: protein phosphorylation	5.54E-03
66	GO:0009664: plant-type cell wall organization	6.83E-03
67	GO:0042538: hyperosmotic salinity response	6.83E-03
68	GO:0050832: defense response to fungus	6.88E-03
69	GO:0009809: lignin biosynthetic process	7.18E-03
70	GO:0010224: response to UV-B	7.35E-03
71	GO:0006857: oligopeptide transport	7.52E-03
72	GO:0009620: response to fungus	8.61E-03
73	GO:0042545: cell wall modification	8.98E-03
74	GO:0006396: RNA processing	9.36E-03
75	GO:0009845: seed germination	1.14E-02
76	GO:0006979: response to oxidative stress	1.16E-02
77	GO:0042744: hydrogen peroxide catabolic process	1.18E-02
78	GO:0007623: circadian rhythm	1.35E-02
79	GO:0045490: pectin catabolic process	1.35E-02
80	GO:0005975: carbohydrate metabolic process	1.75E-02
81	GO:0048366: leaf development	2.06E-02
82	GO:0010200: response to chitin	2.19E-02
83	GO:0015979: photosynthesis	2.35E-02
84	GO:0045892: negative regulation of transcription, DNA-templated	2.46E-02
85	GO:0009737: response to abscisic acid	2.46E-02
86	GO:0032259: methylation	2.74E-02
87	GO:0009751: response to salicylic acid	2.80E-02
88	GO:0016310: phosphorylation	2.83E-02
89	GO:0006629: lipid metabolic process	2.83E-02
90	GO:0009873: ethylene-activated signaling pathway	3.39E-02
91	GO:0009651: response to salt stress	3.86E-02
92	GO:0009416: response to light stimulus	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
2	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
3	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
4	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
5	GO:0004107: chorismate synthase activity	0.00E+00
6	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
7	GO:0004656: procollagen-proline 4-dioxygenase activity	2.93E-06
8	GO:0031219: levanase activity	2.30E-05
9	GO:0017096: acetylserotonin O-methyltransferase activity	2.30E-05
10	GO:0051669: fructan beta-fructosidase activity	2.30E-05
11	GO:0042937: tripeptide transporter activity	5.89E-05
12	GO:0052691: UDP-arabinopyranose mutase activity	5.89E-05
13	GO:0045548: phenylalanine ammonia-lyase activity	1.04E-04
14	GO:0008964: phosphoenolpyruvate carboxylase activity	1.04E-04
15	GO:0016866: intramolecular transferase activity	2.12E-04
16	GO:0042936: dipeptide transporter activity	2.12E-04
17	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.87E-04
18	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.04E-04
19	GO:0004525: ribonuclease III activity	5.46E-04
20	GO:0004568: chitinase activity	8.59E-04
21	GO:0004022: alcohol dehydrogenase (NAD) activity	1.12E-03
22	GO:0016301: kinase activity	1.27E-03
23	GO:0031418: L-ascorbic acid binding	1.49E-03
24	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.70E-03
25	GO:0016760: cellulose synthase (UDP-forming) activity	1.91E-03
26	GO:0001085: RNA polymerase II transcription factor binding	2.36E-03
27	GO:0010181: FMN binding	2.48E-03
28	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.72E-03
29	GO:0051015: actin filament binding	2.96E-03
30	GO:0015250: water channel activity	3.48E-03
31	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.60E-03
32	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.60E-03
33	GO:0045330: aspartyl esterase activity	7.70E-03
34	GO:0030599: pectinesterase activity	8.79E-03
35	GO:0003779: actin binding	8.98E-03
36	GO:0005506: iron ion binding	1.13E-02
37	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.18E-02
38	GO:0046910: pectinesterase inhibitor activity	1.28E-02
39	GO:0004674: protein serine/threonine kinase activity	1.31E-02
40	GO:0042802: identical protein binding	1.60E-02
41	GO:0020037: heme binding	1.82E-02
42	GO:0004601: peroxidase activity	1.84E-02
43	GO:0003682: chromatin binding	1.91E-02
44	GO:0005515: protein binding	1.94E-02
45	GO:0050660: flavin adenine dinucleotide binding	2.04E-02
46	GO:0016787: hydrolase activity	2.47E-02
47	GO:0009055: electron carrier activity	2.97E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000138: Golgi trans cisterna	2.30E-05
3	GO:0005618: cell wall	3.89E-04
4	GO:0005884: actin filament	9.42E-04
5	GO:0005795: Golgi stack	1.30E-03
6	GO:0005576: extracellular region	1.85E-03
7	GO:0009505: plant-type cell wall	2.31E-03
8	GO:0005770: late endosome	2.36E-03
9	GO:0071944: cell periphery	2.96E-03
10	GO:0005667: transcription factor complex	3.75E-03
11	GO:0005829: cytosol	4.93E-03
12	GO:0090406: pollen tube	5.84E-03
13	GO:0005856: cytoskeleton	6.33E-03
14	GO:0005774: vacuolar membrane	8.36E-03
15	GO:0048046: apoplast	8.89E-03
16	GO:0005737: cytoplasm	8.99E-03
17	GO:0005623: cell	1.09E-02
18	GO:0000139: Golgi membrane	1.56E-02
19	GO:0005789: endoplasmic reticulum membrane	1.76E-02
20	GO:0005783: endoplasmic reticulum	2.03E-02
21	GO:0016021: integral component of membrane	2.07E-02
22	GO:0005887: integral component of plasma membrane	3.51E-02
23	GO:0022626: cytosolic ribosome	4.12E-02
24	GO:0005777: peroxisome	4.69E-02