GO Enrichment Analysis of Co-expressed Genes with
AT3G13700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 6 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 7 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 8 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 9 | GO:0015979: photosynthesis | 2.70E-08 |
| 10 | GO:0009773: photosynthetic electron transport in photosystem I | 1.95E-07 |
| 11 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.60E-05 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 2.56E-05 |
| 13 | GO:0061077: chaperone-mediated protein folding | 6.16E-05 |
| 14 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 2.00E-04 |
| 15 | GO:0000476: maturation of 4.5S rRNA | 2.00E-04 |
| 16 | GO:0000967: rRNA 5'-end processing | 2.00E-04 |
| 17 | GO:0042371: vitamin K biosynthetic process | 2.00E-04 |
| 18 | GO:0080093: regulation of photorespiration | 2.00E-04 |
| 19 | GO:0043007: maintenance of rDNA | 2.00E-04 |
| 20 | GO:0031998: regulation of fatty acid beta-oxidation | 2.00E-04 |
| 21 | GO:0010028: xanthophyll cycle | 2.00E-04 |
| 22 | GO:0032544: plastid translation | 2.04E-04 |
| 23 | GO:0010027: thylakoid membrane organization | 2.94E-04 |
| 24 | GO:0009735: response to cytokinin | 3.26E-04 |
| 25 | GO:0090342: regulation of cell aging | 4.48E-04 |
| 26 | GO:0031648: protein destabilization | 4.48E-04 |
| 27 | GO:0016122: xanthophyll metabolic process | 4.48E-04 |
| 28 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.48E-04 |
| 29 | GO:0051262: protein tetramerization | 4.48E-04 |
| 30 | GO:0034470: ncRNA processing | 4.48E-04 |
| 31 | GO:0048281: inflorescence morphogenesis | 7.29E-04 |
| 32 | GO:0006000: fructose metabolic process | 7.29E-04 |
| 33 | GO:0006518: peptide metabolic process | 7.29E-04 |
| 34 | GO:0010623: programmed cell death involved in cell development | 7.29E-04 |
| 35 | GO:0090153: regulation of sphingolipid biosynthetic process | 7.29E-04 |
| 36 | GO:0016050: vesicle organization | 7.29E-04 |
| 37 | GO:0006810: transport | 1.01E-03 |
| 38 | GO:0010148: transpiration | 1.04E-03 |
| 39 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.04E-03 |
| 40 | GO:0009658: chloroplast organization | 1.16E-03 |
| 41 | GO:0051322: anaphase | 1.38E-03 |
| 42 | GO:0006109: regulation of carbohydrate metabolic process | 1.38E-03 |
| 43 | GO:0015994: chlorophyll metabolic process | 1.38E-03 |
| 44 | GO:0010508: positive regulation of autophagy | 1.38E-03 |
| 45 | GO:0051205: protein insertion into membrane | 1.38E-03 |
| 46 | GO:0010021: amylopectin biosynthetic process | 1.38E-03 |
| 47 | GO:0006808: regulation of nitrogen utilization | 1.38E-03 |
| 48 | GO:0048868: pollen tube development | 1.58E-03 |
| 49 | GO:0006465: signal peptide processing | 1.76E-03 |
| 50 | GO:0000304: response to singlet oxygen | 1.76E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 1.76E-03 |
| 52 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.76E-03 |
| 53 | GO:0006097: glyoxylate cycle | 1.76E-03 |
| 54 | GO:0000470: maturation of LSU-rRNA | 2.17E-03 |
| 55 | GO:0006412: translation | 2.17E-03 |
| 56 | GO:0010190: cytochrome b6f complex assembly | 2.17E-03 |
| 57 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.17E-03 |
| 58 | GO:0042026: protein refolding | 2.60E-03 |
| 59 | GO:0042372: phylloquinone biosynthetic process | 2.60E-03 |
| 60 | GO:0006458: 'de novo' protein folding | 2.60E-03 |
| 61 | GO:0070370: cellular heat acclimation | 3.06E-03 |
| 62 | GO:0010103: stomatal complex morphogenesis | 3.06E-03 |
| 63 | GO:0009772: photosynthetic electron transport in photosystem II | 3.06E-03 |
| 64 | GO:0005978: glycogen biosynthetic process | 3.55E-03 |
| 65 | GO:0006002: fructose 6-phosphate metabolic process | 4.06E-03 |
| 66 | GO:0001558: regulation of cell growth | 4.06E-03 |
| 67 | GO:0051865: protein autoubiquitination | 4.60E-03 |
| 68 | GO:0010206: photosystem II repair | 4.60E-03 |
| 69 | GO:0006783: heme biosynthetic process | 4.60E-03 |
| 70 | GO:0042761: very long-chain fatty acid biosynthetic process | 5.15E-03 |
| 71 | GO:0005982: starch metabolic process | 5.15E-03 |
| 72 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.74E-03 |
| 73 | GO:0048829: root cap development | 5.74E-03 |
| 74 | GO:0031627: telomeric loop formation | 5.74E-03 |
| 75 | GO:0042254: ribosome biogenesis | 6.24E-03 |
| 76 | GO:0006415: translational termination | 6.34E-03 |
| 77 | GO:0019684: photosynthesis, light reaction | 6.34E-03 |
| 78 | GO:0009089: lysine biosynthetic process via diaminopimelate | 6.34E-03 |
| 79 | GO:0009073: aromatic amino acid family biosynthetic process | 6.34E-03 |
| 80 | GO:0043085: positive regulation of catalytic activity | 6.34E-03 |
| 81 | GO:0009684: indoleacetic acid biosynthetic process | 6.34E-03 |
| 82 | GO:0010102: lateral root morphogenesis | 7.61E-03 |
| 83 | GO:0010628: positive regulation of gene expression | 7.61E-03 |
| 84 | GO:0006108: malate metabolic process | 7.61E-03 |
| 85 | GO:0006094: gluconeogenesis | 7.61E-03 |
| 86 | GO:0005986: sucrose biosynthetic process | 7.61E-03 |
| 87 | GO:0019253: reductive pentose-phosphate cycle | 8.28E-03 |
| 88 | GO:0005985: sucrose metabolic process | 8.97E-03 |
| 89 | GO:0010025: wax biosynthetic process | 9.68E-03 |
| 90 | GO:0009409: response to cold | 9.82E-03 |
| 91 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.04E-02 |
| 92 | GO:0006418: tRNA aminoacylation for protein translation | 1.12E-02 |
| 93 | GO:0007017: microtubule-based process | 1.12E-02 |
| 94 | GO:0051302: regulation of cell division | 1.12E-02 |
| 95 | GO:0019915: lipid storage | 1.19E-02 |
| 96 | GO:0031408: oxylipin biosynthetic process | 1.19E-02 |
| 97 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.27E-02 |
| 98 | GO:0019748: secondary metabolic process | 1.27E-02 |
| 99 | GO:0009686: gibberellin biosynthetic process | 1.35E-02 |
| 100 | GO:0001944: vasculature development | 1.35E-02 |
| 101 | GO:0010089: xylem development | 1.43E-02 |
| 102 | GO:0006662: glycerol ether metabolic process | 1.69E-02 |
| 103 | GO:0019252: starch biosynthetic process | 1.87E-02 |
| 104 | GO:0030163: protein catabolic process | 2.16E-02 |
| 105 | GO:1901657: glycosyl compound metabolic process | 2.16E-02 |
| 106 | GO:0000910: cytokinesis | 2.45E-02 |
| 107 | GO:0009607: response to biotic stimulus | 2.66E-02 |
| 108 | GO:0009627: systemic acquired resistance | 2.76E-02 |
| 109 | GO:0009817: defense response to fungus, incompatible interaction | 3.09E-02 |
| 110 | GO:0009834: plant-type secondary cell wall biogenesis | 3.31E-02 |
| 111 | GO:0009631: cold acclimation | 3.42E-02 |
| 112 | GO:0005975: carbohydrate metabolic process | 3.70E-02 |
| 113 | GO:0034599: cellular response to oxidative stress | 3.77E-02 |
| 114 | GO:0006099: tricarboxylic acid cycle | 3.77E-02 |
| 115 | GO:0030001: metal ion transport | 4.01E-02 |
| 116 | GO:0006631: fatty acid metabolic process | 4.13E-02 |
| 117 | GO:0055114: oxidation-reduction process | 4.22E-02 |
| 118 | GO:0009965: leaf morphogenesis | 4.75E-02 |
| 119 | GO:0006869: lipid transport | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 5 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 6 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 7 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 8 | GO:0005528: FK506 binding | 1.10E-06 |
| 9 | GO:0016851: magnesium chelatase activity | 1.60E-05 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.94E-05 |
| 11 | GO:0019843: rRNA binding | 3.97E-05 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.07E-04 |
| 13 | GO:0048038: quinone binding | 1.77E-04 |
| 14 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 2.00E-04 |
| 15 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.00E-04 |
| 16 | GO:0008158: hedgehog receptor activity | 2.00E-04 |
| 17 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.00E-04 |
| 18 | GO:0005227: calcium activated cation channel activity | 2.00E-04 |
| 19 | GO:0044183: protein binding involved in protein folding | 4.04E-04 |
| 20 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.48E-04 |
| 21 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.48E-04 |
| 22 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.48E-04 |
| 23 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.48E-04 |
| 24 | GO:0003735: structural constituent of ribosome | 5.99E-04 |
| 25 | GO:0043169: cation binding | 7.29E-04 |
| 26 | GO:0017150: tRNA dihydrouridine synthase activity | 7.29E-04 |
| 27 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.04E-03 |
| 28 | GO:0016149: translation release factor activity, codon specific | 1.04E-03 |
| 29 | GO:0043023: ribosomal large subunit binding | 1.04E-03 |
| 30 | GO:0080032: methyl jasmonate esterase activity | 1.38E-03 |
| 31 | GO:0019199: transmembrane receptor protein kinase activity | 1.38E-03 |
| 32 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.38E-03 |
| 33 | GO:0042277: peptide binding | 1.38E-03 |
| 34 | GO:0004659: prenyltransferase activity | 1.38E-03 |
| 35 | GO:0004040: amidase activity | 1.76E-03 |
| 36 | GO:0016615: malate dehydrogenase activity | 2.17E-03 |
| 37 | GO:0080030: methyl indole-3-acetate esterase activity | 2.17E-03 |
| 38 | GO:0030060: L-malate dehydrogenase activity | 2.60E-03 |
| 39 | GO:0005261: cation channel activity | 2.60E-03 |
| 40 | GO:0004033: aldo-keto reductase (NADP) activity | 3.55E-03 |
| 41 | GO:0003747: translation release factor activity | 4.60E-03 |
| 42 | GO:0008047: enzyme activator activity | 5.74E-03 |
| 43 | GO:0003691: double-stranded telomeric DNA binding | 6.34E-03 |
| 44 | GO:0047372: acylglycerol lipase activity | 6.34E-03 |
| 45 | GO:0004565: beta-galactosidase activity | 7.61E-03 |
| 46 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.61E-03 |
| 47 | GO:0016491: oxidoreductase activity | 9.36E-03 |
| 48 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 9.79E-03 |
| 49 | GO:0004857: enzyme inhibitor activity | 1.04E-02 |
| 50 | GO:0030570: pectate lyase activity | 1.35E-02 |
| 51 | GO:0047134: protein-disulfide reductase activity | 1.52E-02 |
| 52 | GO:0004812: aminoacyl-tRNA ligase activity | 1.52E-02 |
| 53 | GO:0004252: serine-type endopeptidase activity | 1.59E-02 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 1.78E-02 |
| 55 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.16E-02 |
| 56 | GO:0005200: structural constituent of cytoskeleton | 2.35E-02 |
| 57 | GO:0102483: scopolin beta-glucosidase activity | 2.87E-02 |
| 58 | GO:0008236: serine-type peptidase activity | 2.98E-02 |
| 59 | GO:0000287: magnesium ion binding | 3.01E-02 |
| 60 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.09E-02 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 3.13E-02 |
| 62 | GO:0004222: metalloendopeptidase activity | 3.31E-02 |
| 63 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.65E-02 |
| 64 | GO:0008422: beta-glucosidase activity | 3.89E-02 |
| 65 | GO:0004185: serine-type carboxypeptidase activity | 4.37E-02 |
| 66 | GO:0043621: protein self-association | 4.62E-02 |
| 67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0042579: microbody | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.08E-40 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.40E-24 |
| 5 | GO:0009570: chloroplast stroma | 1.05E-21 |
| 6 | GO:0009534: chloroplast thylakoid | 1.97E-21 |
| 7 | GO:0009941: chloroplast envelope | 7.32E-17 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 5.48E-12 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.01E-10 |
| 10 | GO:0031977: thylakoid lumen | 1.34E-07 |
| 11 | GO:0009579: thylakoid | 1.86E-07 |
| 12 | GO:0010007: magnesium chelatase complex | 6.94E-06 |
| 13 | GO:0030095: chloroplast photosystem II | 2.65E-05 |
| 14 | GO:0009538: photosystem I reaction center | 1.64E-04 |
| 15 | GO:0005787: signal peptidase complex | 2.00E-04 |
| 16 | GO:0009295: nucleoid | 2.51E-04 |
| 17 | GO:0010287: plastoglobule | 3.33E-04 |
| 18 | GO:0005840: ribosome | 4.78E-04 |
| 19 | GO:0009508: plastid chromosome | 5.25E-04 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 8.95E-04 |
| 21 | GO:0031969: chloroplast membrane | 1.60E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 1.82E-03 |
| 23 | GO:0010319: stromule | 2.50E-03 |
| 24 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.60E-03 |
| 25 | GO:0009533: chloroplast stromal thylakoid | 3.06E-03 |
| 26 | GO:0009501: amyloplast | 3.55E-03 |
| 27 | GO:0000783: nuclear telomere cap complex | 4.06E-03 |
| 28 | GO:0045298: tubulin complex | 4.60E-03 |
| 29 | GO:0048046: apoplast | 7.24E-03 |
| 30 | GO:0009574: preprophase band | 7.61E-03 |
| 31 | GO:0009536: plastid | 8.27E-03 |
| 32 | GO:0043234: protein complex | 9.68E-03 |
| 33 | GO:0042651: thylakoid membrane | 1.12E-02 |
| 34 | GO:0009706: chloroplast inner membrane | 1.14E-02 |
| 35 | GO:0015935: small ribosomal subunit | 1.19E-02 |
| 36 | GO:0009532: plastid stroma | 1.19E-02 |
| 37 | GO:0015934: large ribosomal subunit | 3.42E-02 |
| 38 | GO:0005874: microtubule | 3.67E-02 |