co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G13510

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006044: N-acetylglucosamine metabolic process	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:0032350: regulation of hormone metabolic process	0.00E+00
4	GO:0036172: thiamine salvage	0.00E+00
5	GO:0019450: L-cysteine catabolic process to pyruvate	0.00E+00
6	GO:0045930: negative regulation of mitotic cell cycle	0.00E+00
7	GO:0048438: floral whorl development	8.09E-05
8	GO:0000066: mitochondrial ornithine transport	8.09E-05
9	GO:1902265: abscisic acid homeostasis	8.09E-05
10	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.93E-04
11	GO:0010220: positive regulation of vernalization response	1.93E-04
12	GO:0009220: pyrimidine ribonucleotide biosynthetic process	1.93E-04
13	GO:0044419: interspecies interaction between organisms	1.93E-04
14	GO:0007154: cell communication	1.93E-04
15	GO:0071492: cellular response to UV-A	3.24E-04
16	GO:0010476: gibberellin mediated signaling pathway	3.24E-04
17	GO:0010325: raffinose family oligosaccharide biosynthetic process	3.24E-04
18	GO:0031022: nuclear migration along microfilament	3.24E-04
19	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	3.24E-04
20	GO:0032259: methylation	4.09E-04
21	GO:0009963: positive regulation of flavonoid biosynthetic process	4.66E-04
22	GO:0009647: skotomorphogenesis	4.66E-04
23	GO:0044205: 'de novo' UMP biosynthetic process	6.21E-04
24	GO:0009902: chloroplast relocation	6.21E-04
25	GO:0009956: radial pattern formation	6.21E-04
26	GO:0071486: cellular response to high light intensity	6.21E-04
27	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	6.21E-04
28	GO:0009765: photosynthesis, light harvesting	6.21E-04
29	GO:0009649: entrainment of circadian clock	6.21E-04
30	GO:0008295: spermidine biosynthetic process	6.21E-04
31	GO:0046283: anthocyanin-containing compound metabolic process	7.86E-04
32	GO:0009229: thiamine diphosphate biosynthetic process	7.86E-04
33	GO:0006574: valine catabolic process	9.59E-04
34	GO:0010304: PSII associated light-harvesting complex II catabolic process	9.59E-04
35	GO:0070814: hydrogen sulfide biosynthetic process	9.59E-04
36	GO:0009228: thiamine biosynthetic process	9.59E-04
37	GO:0000060: protein import into nucleus, translocation	9.59E-04
38	GO:0006796: phosphate-containing compound metabolic process	9.59E-04
39	GO:0009117: nucleotide metabolic process	9.59E-04
40	GO:0009903: chloroplast avoidance movement	1.14E-03
41	GO:0048444: floral organ morphogenesis	1.14E-03
42	GO:0010077: maintenance of inflorescence meristem identity	1.14E-03
43	GO:0010076: maintenance of floral meristem identity	1.14E-03
44	GO:0022904: respiratory electron transport chain	1.34E-03
45	GO:0006826: iron ion transport	1.34E-03
46	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.34E-03
47	GO:0009231: riboflavin biosynthetic process	1.54E-03
48	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.54E-03
49	GO:0006839: mitochondrial transport	1.55E-03
50	GO:0006526: arginine biosynthetic process	1.76E-03
51	GO:0022900: electron transport chain	1.76E-03
52	GO:0009056: catabolic process	1.98E-03
53	GO:0046916: cellular transition metal ion homeostasis	1.98E-03
54	GO:0008356: asymmetric cell division	2.22E-03
55	GO:0009641: shade avoidance	2.46E-03
56	GO:0009970: cellular response to sulfate starvation	2.46E-03
57	GO:0000103: sulfate assimilation	2.46E-03
58	GO:0018119: peptidyl-cysteine S-nitrosylation	2.71E-03
59	GO:0072593: reactive oxygen species metabolic process	2.71E-03
60	GO:0010582: floral meristem determinacy	2.97E-03
61	GO:0006108: malate metabolic process	3.24E-03
62	GO:0050826: response to freezing	3.24E-03
63	GO:0009718: anthocyanin-containing compound biosynthetic process	3.24E-03
64	GO:0030048: actin filament-based movement	3.24E-03
65	GO:0010039: response to iron ion	3.81E-03
66	GO:0009116: nucleoside metabolic process	4.40E-03
67	GO:0006874: cellular calcium ion homeostasis	4.70E-03
68	GO:0019915: lipid storage	5.02E-03
69	GO:0080092: regulation of pollen tube growth	5.34E-03
70	GO:0016226: iron-sulfur cluster assembly	5.34E-03
71	GO:0006810: transport	5.41E-03
72	GO:0006012: galactose metabolic process	5.67E-03
73	GO:0009693: ethylene biosynthetic process	5.67E-03
74	GO:0005975: carbohydrate metabolic process	5.69E-03
75	GO:0007623: circadian rhythm	5.69E-03
76	GO:0009739: response to gibberellin	6.36E-03
77	GO:0080022: primary root development	6.70E-03
78	GO:0006520: cellular amino acid metabolic process	7.06E-03
79	GO:0055072: iron ion homeostasis	7.79E-03
80	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.17E-03
81	GO:1901657: glycosyl compound metabolic process	8.94E-03
82	GO:0016126: sterol biosynthetic process	1.06E-02
83	GO:0010029: regulation of seed germination	1.10E-02
84	GO:0006974: cellular response to DNA damage stimulus	1.14E-02
85	GO:0046777: protein autophosphorylation	1.17E-02
86	GO:0048573: photoperiodism, flowering	1.19E-02
87	GO:0010411: xyloglucan metabolic process	1.19E-02
88	GO:0000160: phosphorelay signal transduction system	1.32E-02
89	GO:0010119: regulation of stomatal movement	1.41E-02
90	GO:0009637: response to blue light	1.51E-02
91	GO:0009853: photorespiration	1.51E-02
92	GO:0006099: tricarboxylic acid cycle	1.56E-02
93	GO:0009408: response to heat	1.62E-02
94	GO:0030001: metal ion transport	1.65E-02
95	GO:0009926: auxin polar transport	1.80E-02
96	GO:0009640: photomorphogenesis	1.80E-02
97	GO:0000165: MAPK cascade	2.07E-02
98	GO:0009585: red, far-red light phototransduction	2.23E-02
99	GO:0009736: cytokinin-activated signaling pathway	2.23E-02
100	GO:0010224: response to UV-B	2.29E-02
101	GO:0009416: response to light stimulus	2.87E-02
102	GO:0051726: regulation of cell cycle	2.99E-02
103	GO:0045893: positive regulation of transcription, DNA-templated	3.29E-02
104	GO:0009058: biosynthetic process	3.49E-02
105	GO:0016036: cellular response to phosphate starvation	4.02E-02

Rank	GO Term	Adjusted P value
1	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
2	GO:0080146: L-cysteine desulfhydrase activity	0.00E+00
3	GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity	0.00E+00
4	GO:0004746: riboflavin synthase activity	0.00E+00
5	GO:0003992: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity	0.00E+00
6	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
7	GO:0004588: orotate phosphoribosyltransferase activity	0.00E+00
8	GO:0004590: orotidine-5'-phosphate decarboxylase activity	0.00E+00
9	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	8.09E-05
10	GO:0046480: galactolipid galactosyltransferase activity	8.09E-05
11	GO:0080079: cellobiose glucosidase activity	8.09E-05
12	GO:0008168: methyltransferase activity	1.53E-04
13	GO:0010331: gibberellin binding	1.93E-04
14	GO:0043425: bHLH transcription factor binding	1.93E-04
15	GO:0004766: spermidine synthase activity	1.93E-04
16	GO:0000064: L-ornithine transmembrane transporter activity	1.93E-04
17	GO:0004781: sulfate adenylyltransferase (ATP) activity	3.24E-04
18	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	3.24E-04
19	GO:0000254: C-4 methylsterol oxidase activity	4.66E-04
20	GO:0035529: NADH pyrophosphatase activity	4.66E-04
21	GO:0008080: N-acetyltransferase activity	4.83E-04
22	GO:0016651: oxidoreductase activity, acting on NAD(P)H	7.86E-04
23	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	9.59E-04
24	GO:0030060: L-malate dehydrogenase activity	1.14E-03
25	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.14E-03
26	GO:0004427: inorganic diphosphatase activity	1.34E-03
27	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.54E-03
28	GO:0004034: aldose 1-epimerase activity	1.54E-03
29	GO:0046914: transition metal ion binding	1.76E-03
30	GO:0051537: 2 iron, 2 sulfur cluster binding	1.88E-03
31	GO:0008047: enzyme activator activity	2.46E-03
32	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.71E-03
33	GO:0008378: galactosyltransferase activity	2.97E-03
34	GO:0022857: transmembrane transporter activity	3.12E-03
35	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.52E-03
36	GO:0004970: ionotropic glutamate receptor activity	3.81E-03
37	GO:0005217: intracellular ligand-gated ion channel activity	3.81E-03
38	GO:0030170: pyridoxal phosphate binding	4.58E-03
39	GO:0004176: ATP-dependent peptidase activity	5.02E-03
40	GO:0042802: identical protein binding	7.22E-03
41	GO:0016853: isomerase activity	7.42E-03
42	GO:0048038: quinone binding	8.17E-03
43	GO:0000156: phosphorelay response regulator activity	8.94E-03
44	GO:0008483: transaminase activity	9.75E-03
45	GO:0008237: metallopeptidase activity	9.75E-03
46	GO:0016413: O-acetyltransferase activity	1.02E-02
47	GO:0016168: chlorophyll binding	1.10E-02
48	GO:0008375: acetylglucosaminyltransferase activity	1.14E-02
49	GO:0030247: polysaccharide binding	1.19E-02
50	GO:0008236: serine-type peptidase activity	1.23E-02
51	GO:0004222: metalloendopeptidase activity	1.37E-02
52	GO:0003824: catalytic activity	1.54E-02
53	GO:0008422: beta-glucosidase activity	1.60E-02
54	GO:0009055: electron carrier activity	1.73E-02
55	GO:0004185: serine-type carboxypeptidase activity	1.80E-02
56	GO:0051287: NAD binding	2.07E-02
57	GO:0016298: lipase activity	2.29E-02
58	GO:0015035: protein disulfide oxidoreductase activity	2.93E-02
59	GO:0004386: helicase activity	3.05E-02
60	GO:0004252: serine-type endopeptidase activity	3.62E-02
61	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.69E-02
62	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.78E-02
63	GO:0005507: copper ion binding	4.08E-02

Rank	GO Term	Adjusted P value
1	GO:0055037: recycling endosome	0.00E+00
2	GO:0009507: chloroplast	3.53E-05
3	GO:0000152: nuclear ubiquitin ligase complex	8.09E-05
4	GO:0031359: integral component of chloroplast outer membrane	1.34E-03
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.98E-03
6	GO:0016604: nuclear body	2.22E-03
7	GO:0005743: mitochondrial inner membrane	2.47E-03
8	GO:0005764: lysosome	3.52E-03
9	GO:0005769: early endosome	4.10E-03
10	GO:0009536: plastid	4.12E-03
11	GO:0045271: respiratory chain complex I	4.70E-03
12	GO:0005770: late endosome	7.06E-03
13	GO:0009523: photosystem II	7.79E-03
14	GO:0009535: chloroplast thylakoid membrane	1.02E-02
15	GO:0009707: chloroplast outer membrane	1.27E-02
16	GO:0005829: cytosol	1.69E-02
17	GO:0009570: chloroplast stroma	1.70E-02
18	GO:0031966: mitochondrial membrane	2.12E-02
19	GO:0005747: mitochondrial respiratory chain complex I	2.57E-02
20	GO:0009706: chloroplast inner membrane	2.87E-02
21	GO:0005623: cell	3.43E-02
22	GO:0005773: vacuole	3.69E-02
23	GO:0005759: mitochondrial matrix	3.96E-02