GO Enrichment Analysis of Co-expressed Genes with
AT3G13062
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009439: cyanate metabolic process | 0.00E+00 |
| 2 | GO:0009440: cyanate catabolic process | 0.00E+00 |
| 3 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 4 | GO:0010336: gibberellic acid homeostasis | 0.00E+00 |
| 5 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 6 | GO:0006624: vacuolar protein processing | 1.75E-06 |
| 7 | GO:0009902: chloroplast relocation | 3.37E-06 |
| 8 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.08E-06 |
| 9 | GO:0009903: chloroplast avoidance movement | 1.27E-05 |
| 10 | GO:0051453: regulation of intracellular pH | 4.56E-05 |
| 11 | GO:0006835: dicarboxylic acid transport | 5.64E-05 |
| 12 | GO:0010036: response to boron-containing substance | 5.64E-05 |
| 13 | GO:1902265: abscisic acid homeostasis | 5.64E-05 |
| 14 | GO:0006508: proteolysis | 8.80E-05 |
| 15 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.37E-04 |
| 16 | GO:0006898: receptor-mediated endocytosis | 1.37E-04 |
| 17 | GO:0031022: nuclear migration along microfilament | 2.34E-04 |
| 18 | GO:0071492: cellular response to UV-A | 2.34E-04 |
| 19 | GO:0044375: regulation of peroxisome size | 2.34E-04 |
| 20 | GO:0046713: borate transport | 3.41E-04 |
| 21 | GO:0015743: malate transport | 4.56E-04 |
| 22 | GO:0071486: cellular response to high light intensity | 4.56E-04 |
| 23 | GO:0009765: photosynthesis, light harvesting | 4.56E-04 |
| 24 | GO:0071483: cellular response to blue light | 4.56E-04 |
| 25 | GO:0016120: carotene biosynthetic process | 5.78E-04 |
| 26 | GO:0000304: response to singlet oxygen | 5.78E-04 |
| 27 | GO:0009904: chloroplast accumulation movement | 5.78E-04 |
| 28 | GO:0010236: plastoquinone biosynthetic process | 5.78E-04 |
| 29 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 7.07E-04 |
| 30 | GO:0006796: phosphate-containing compound metabolic process | 7.07E-04 |
| 31 | GO:0009117: nucleotide metabolic process | 7.07E-04 |
| 32 | GO:0034389: lipid particle organization | 8.44E-04 |
| 33 | GO:0010189: vitamin E biosynthetic process | 8.44E-04 |
| 34 | GO:0050790: regulation of catalytic activity | 9.85E-04 |
| 35 | GO:0009231: riboflavin biosynthetic process | 1.13E-03 |
| 36 | GO:0006102: isocitrate metabolic process | 1.13E-03 |
| 37 | GO:0016559: peroxisome fission | 1.13E-03 |
| 38 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.13E-03 |
| 39 | GO:0030162: regulation of proteolysis | 1.13E-03 |
| 40 | GO:0030091: protein repair | 1.13E-03 |
| 41 | GO:0019432: triglyceride biosynthetic process | 1.45E-03 |
| 42 | GO:0009767: photosynthetic electron transport chain | 2.36E-03 |
| 43 | GO:0030048: actin filament-based movement | 2.36E-03 |
| 44 | GO:0007015: actin filament organization | 2.56E-03 |
| 45 | GO:0007031: peroxisome organization | 2.76E-03 |
| 46 | GO:0006071: glycerol metabolic process | 2.97E-03 |
| 47 | GO:0009611: response to wounding | 3.13E-03 |
| 48 | GO:0051017: actin filament bundle assembly | 3.18E-03 |
| 49 | GO:0008299: isoprenoid biosynthetic process | 3.40E-03 |
| 50 | GO:0019915: lipid storage | 3.63E-03 |
| 51 | GO:0009693: ethylene biosynthetic process | 4.10E-03 |
| 52 | GO:0016117: carotenoid biosynthetic process | 4.58E-03 |
| 53 | GO:0006520: cellular amino acid metabolic process | 5.09E-03 |
| 54 | GO:0006814: sodium ion transport | 5.35E-03 |
| 55 | GO:0048544: recognition of pollen | 5.35E-03 |
| 56 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.88E-03 |
| 57 | GO:0009723: response to ethylene | 6.32E-03 |
| 58 | GO:0006464: cellular protein modification process | 6.71E-03 |
| 59 | GO:0044550: secondary metabolite biosynthetic process | 7.37E-03 |
| 60 | GO:0010029: regulation of seed germination | 7.89E-03 |
| 61 | GO:0042128: nitrate assimilation | 8.19E-03 |
| 62 | GO:0009813: flavonoid biosynthetic process | 9.45E-03 |
| 63 | GO:0016042: lipid catabolic process | 9.72E-03 |
| 64 | GO:0006811: ion transport | 9.78E-03 |
| 65 | GO:0009751: response to salicylic acid | 9.87E-03 |
| 66 | GO:0010043: response to zinc ion | 1.01E-02 |
| 67 | GO:0009637: response to blue light | 1.08E-02 |
| 68 | GO:0008152: metabolic process | 1.10E-02 |
| 69 | GO:0006099: tricarboxylic acid cycle | 1.11E-02 |
| 70 | GO:0042542: response to hydrogen peroxide | 1.25E-02 |
| 71 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.48E-02 |
| 72 | GO:0006857: oligopeptide transport | 1.67E-02 |
| 73 | GO:0009909: regulation of flower development | 1.71E-02 |
| 74 | GO:0009553: embryo sac development | 2.00E-02 |
| 75 | GO:0042545: cell wall modification | 2.00E-02 |
| 76 | GO:0009058: biosynthetic process | 2.49E-02 |
| 77 | GO:0045490: pectin catabolic process | 3.02E-02 |
| 78 | GO:0007623: circadian rhythm | 3.02E-02 |
| 79 | GO:0010150: leaf senescence | 3.02E-02 |
| 80 | GO:0009451: RNA modification | 3.07E-02 |
| 81 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.27E-02 |
| 82 | GO:0006970: response to osmotic stress | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 2 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 3 | GO:0008824: cyanate hydratase activity | 0.00E+00 |
| 4 | GO:0017153: sodium:dicarboxylate symporter activity | 0.00E+00 |
| 5 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
| 6 | GO:0004197: cysteine-type endopeptidase activity | 1.42E-05 |
| 7 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 5.64E-05 |
| 8 | GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity | 5.64E-05 |
| 9 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 5.64E-05 |
| 10 | GO:0080139: borate efflux transmembrane transporter activity | 5.64E-05 |
| 11 | GO:0004328: formamidase activity | 5.64E-05 |
| 12 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.37E-04 |
| 13 | GO:0050347: trans-octaprenyltranstransferase activity | 1.37E-04 |
| 14 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.37E-04 |
| 15 | GO:0004046: aminoacylase activity | 1.37E-04 |
| 16 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.37E-04 |
| 17 | GO:0003935: GTP cyclohydrolase II activity | 2.34E-04 |
| 18 | GO:0035529: NADH pyrophosphatase activity | 3.41E-04 |
| 19 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.41E-04 |
| 20 | GO:0046715: borate transmembrane transporter activity | 3.41E-04 |
| 21 | GO:0042802: identical protein binding | 5.49E-04 |
| 22 | GO:0015301: anion:anion antiporter activity | 5.78E-04 |
| 23 | GO:0005452: inorganic anion exchanger activity | 5.78E-04 |
| 24 | GO:0008236: serine-type peptidase activity | 6.60E-04 |
| 25 | GO:0000293: ferric-chelate reductase activity | 7.07E-04 |
| 26 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 7.07E-04 |
| 27 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 7.07E-04 |
| 28 | GO:0004144: diacylglycerol O-acyltransferase activity | 8.44E-04 |
| 29 | GO:0004427: inorganic diphosphatase activity | 9.85E-04 |
| 30 | GO:0015140: malate transmembrane transporter activity | 9.85E-04 |
| 31 | GO:0004185: serine-type carboxypeptidase activity | 1.10E-03 |
| 32 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 1.13E-03 |
| 33 | GO:0004175: endopeptidase activity | 2.56E-03 |
| 34 | GO:0003712: transcription cofactor activity | 2.76E-03 |
| 35 | GO:0004176: ATP-dependent peptidase activity | 3.63E-03 |
| 36 | GO:0016787: hydrolase activity | 4.62E-03 |
| 37 | GO:0004402: histone acetyltransferase activity | 4.83E-03 |
| 38 | GO:0000287: magnesium ion binding | 5.37E-03 |
| 39 | GO:0016788: hydrolase activity, acting on ester bonds | 5.57E-03 |
| 40 | GO:0004518: nuclease activity | 6.15E-03 |
| 41 | GO:0008483: transaminase activity | 7.00E-03 |
| 42 | GO:0008237: metallopeptidase activity | 7.00E-03 |
| 43 | GO:0052689: carboxylic ester hydrolase activity | 7.49E-03 |
| 44 | GO:0016168: chlorophyll binding | 7.89E-03 |
| 45 | GO:0004806: triglyceride lipase activity | 8.50E-03 |
| 46 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 8.76E-03 |
| 47 | GO:0004222: metalloendopeptidase activity | 9.78E-03 |
| 48 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.08E-02 |
| 49 | GO:0020037: heme binding | 1.33E-02 |
| 50 | GO:0051287: NAD binding | 1.48E-02 |
| 51 | GO:0016298: lipase activity | 1.63E-02 |
| 52 | GO:0031625: ubiquitin protein ligase binding | 1.71E-02 |
| 53 | GO:0045330: aspartyl esterase activity | 1.71E-02 |
| 54 | GO:0008234: cysteine-type peptidase activity | 1.71E-02 |
| 55 | GO:0030599: pectinesterase activity | 1.96E-02 |
| 56 | GO:0015035: protein disulfide oxidoreductase activity | 2.09E-02 |
| 57 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.45E-02 |
| 58 | GO:0019825: oxygen binding | 2.54E-02 |
| 59 | GO:0030170: pyridoxal phosphate binding | 2.58E-02 |
| 60 | GO:0046910: pectinesterase inhibitor activity | 2.87E-02 |
| 61 | GO:0005506: iron ion binding | 3.55E-02 |
| 62 | GO:0003824: catalytic activity | 3.95E-02 |
| 63 | GO:0016491: oxidoreductase activity | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097708: intracellular vesicle | 0.00E+00 |
| 2 | GO:0005773: vacuole | 1.17E-07 |
| 3 | GO:0043674: columella | 5.64E-05 |
| 4 | GO:0005764: lysosome | 1.02E-04 |
| 5 | GO:0016328: lateral plasma membrane | 2.34E-04 |
| 6 | GO:0000323: lytic vacuole | 3.41E-04 |
| 7 | GO:0031463: Cul3-RING ubiquitin ligase complex | 7.07E-04 |
| 8 | GO:0031982: vesicle | 1.13E-03 |
| 9 | GO:0005779: integral component of peroxisomal membrane | 1.29E-03 |
| 10 | GO:0005811: lipid particle | 1.29E-03 |
| 11 | GO:0005884: actin filament | 1.97E-03 |
| 12 | GO:0005623: cell | 2.65E-03 |
| 13 | GO:0042651: thylakoid membrane | 3.40E-03 |
| 14 | GO:0005777: peroxisome | 3.63E-03 |
| 15 | GO:0005615: extracellular space | 3.96E-03 |
| 16 | GO:0009507: chloroplast | 4.26E-03 |
| 17 | GO:0009523: photosystem II | 5.61E-03 |
| 18 | GO:0071944: cell periphery | 6.43E-03 |
| 19 | GO:0005778: peroxisomal membrane | 7.00E-03 |
| 20 | GO:0019005: SCF ubiquitin ligase complex | 9.13E-03 |
| 21 | GO:0009536: plastid | 9.66E-03 |
| 22 | GO:0009535: chloroplast thylakoid membrane | 2.07E-02 |
| 23 | GO:0016021: integral component of membrane | 3.00E-02 |
| 24 | GO:0005774: vacuolar membrane | 3.57E-02 |
| 25 | GO:0009505: plant-type cell wall | 4.51E-02 |
| 26 | GO:0031969: chloroplast membrane | 4.80E-02 |