Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G13050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0052573: UDP-D-galactose metabolic process0.00E+00
2GO:1900067: regulation of cellular response to alkaline pH0.00E+00
3GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
4GO:0019427: acetyl-CoA biosynthetic process from acetate0.00E+00
5GO:0042353: fucose biosynthetic process0.00E+00
6GO:0032497: detection of lipopolysaccharide0.00E+00
7GO:0019481: L-alanine catabolic process, by transamination0.00E+00
8GO:0032499: detection of peptidoglycan0.00E+00
9GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
10GO:0046398: UDP-glucuronate metabolic process0.00E+00
11GO:0009699: phenylpropanoid biosynthetic process1.37E-07
12GO:0002679: respiratory burst involved in defense response1.42E-07
13GO:0010200: response to chitin2.14E-07
14GO:0006468: protein phosphorylation2.27E-06
15GO:0046777: protein autophosphorylation3.01E-06
16GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.16E-06
17GO:0051865: protein autoubiquitination1.54E-05
18GO:0007166: cell surface receptor signaling pathway4.77E-05
19GO:0033358: UDP-L-arabinose biosynthetic process5.77E-05
20GO:1902347: response to strigolactone5.77E-05
21GO:0045227: capsule polysaccharide biosynthetic process5.77E-05
22GO:0009611: response to wounding6.91E-05
23GO:0042742: defense response to bacterium1.16E-04
24GO:0045087: innate immune response1.42E-04
25GO:0016310: phosphorylation1.48E-04
26GO:0010726: positive regulation of hydrogen peroxide metabolic process2.97E-04
27GO:0080157: regulation of plant-type cell wall organization or biogenesis2.97E-04
28GO:0046244: salicylic acid catabolic process2.97E-04
29GO:0032491: detection of molecule of fungal origin2.97E-04
30GO:1900384: regulation of flavonol biosynthetic process2.97E-04
31GO:0006083: acetate metabolic process2.97E-04
32GO:0009966: regulation of signal transduction2.97E-04
33GO:0045010: actin nucleation2.98E-04
34GO:0048544: recognition of pollen3.17E-04
35GO:0009555: pollen development3.19E-04
36GO:0006470: protein dephosphorylation3.37E-04
37GO:0002229: defense response to oomycetes3.81E-04
38GO:0007064: mitotic sister chromatid cohesion6.09E-04
39GO:0019538: protein metabolic process6.09E-04
40GO:0010372: positive regulation of gibberellin biosynthetic process6.50E-04
41GO:0002221: pattern recognition receptor signaling pathway6.50E-04
42GO:0046939: nucleotide phosphorylation6.50E-04
43GO:0010155: regulation of proton transport6.50E-04
44GO:0042754: negative regulation of circadian rhythm6.50E-04
45GO:0009805: coumarin biosynthetic process6.50E-04
46GO:0006952: defense response7.38E-04
47GO:0055046: microgametogenesis9.08E-04
48GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.05E-03
49GO:0010253: UDP-rhamnose biosynthetic process1.05E-03
50GO:0006011: UDP-glucose metabolic process1.05E-03
51GO:0010447: response to acidic pH1.05E-03
52GO:0009225: nucleotide-sugar metabolic process1.14E-03
53GO:0070588: calcium ion transmembrane transport1.14E-03
54GO:0046686: response to cadmium ion1.34E-03
55GO:0009863: salicylic acid mediated signaling pathway1.40E-03
56GO:0043207: response to external biotic stimulus1.51E-03
57GO:0030100: regulation of endocytosis1.51E-03
58GO:0009800: cinnamic acid biosynthetic process1.51E-03
59GO:0009399: nitrogen fixation1.51E-03
60GO:0033014: tetrapyrrole biosynthetic process1.51E-03
61GO:0009226: nucleotide-sugar biosynthetic process1.51E-03
62GO:0071323: cellular response to chitin1.51E-03
63GO:0006986: response to unfolded protein1.51E-03
64GO:0009695: jasmonic acid biosynthetic process1.55E-03
65GO:0010107: potassium ion import2.02E-03
66GO:0071219: cellular response to molecule of bacterial origin2.02E-03
67GO:0033356: UDP-L-arabinose metabolic process2.02E-03
68GO:0034440: lipid oxidation2.02E-03
69GO:0006012: galactose metabolic process2.02E-03
70GO:0015743: malate transport2.02E-03
71GO:0009809: lignin biosynthetic process2.31E-03
72GO:0009164: nucleoside catabolic process2.58E-03
73GO:0043484: regulation of RNA splicing2.58E-03
74GO:0030041: actin filament polymerization2.58E-03
75GO:0048317: seed morphogenesis3.19E-03
76GO:0006559: L-phenylalanine catabolic process3.19E-03
77GO:1900425: negative regulation of defense response to bacterium3.19E-03
78GO:0010337: regulation of salicylic acid metabolic process3.19E-03
79GO:0010942: positive regulation of cell death3.19E-03
80GO:0006751: glutathione catabolic process3.19E-03
81GO:0010256: endomembrane system organization3.19E-03
82GO:0009620: response to fungus3.22E-03
83GO:0080086: stamen filament development3.84E-03
84GO:0080167: response to karrikin3.84E-03
85GO:0009742: brassinosteroid mediated signaling pathway3.90E-03
86GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway4.53E-03
87GO:0010044: response to aluminum ion4.53E-03
88GO:0006955: immune response4.53E-03
89GO:0035556: intracellular signal transduction5.09E-03
90GO:0006979: response to oxidative stress5.11E-03
91GO:0009816: defense response to bacterium, incompatible interaction5.22E-03
92GO:0009819: drought recovery5.26E-03
93GO:0006402: mRNA catabolic process5.26E-03
94GO:0006491: N-glycan processing5.26E-03
95GO:1900150: regulation of defense response to fungus5.26E-03
96GO:0048658: anther wall tapetum development5.26E-03
97GO:0009845: seed germination5.33E-03
98GO:0060321: acceptance of pollen6.03E-03
99GO:0030968: endoplasmic reticulum unfolded protein response6.03E-03
100GO:0009932: cell tip growth6.03E-03
101GO:0008219: cell death6.45E-03
102GO:0016567: protein ubiquitination6.55E-03
103GO:0090333: regulation of stomatal closure6.83E-03
104GO:0006783: heme biosynthetic process6.83E-03
105GO:0009835: fruit ripening6.83E-03
106GO:0006779: porphyrin-containing compound biosynthetic process7.67E-03
107GO:0008202: steroid metabolic process7.67E-03
108GO:0006782: protoporphyrinogen IX biosynthetic process8.55E-03
109GO:0009688: abscisic acid biosynthetic process8.55E-03
110GO:0048829: root cap development8.55E-03
111GO:0010192: mucilage biosynthetic process8.55E-03
112GO:0009617: response to bacterium9.10E-03
113GO:0015770: sucrose transport9.46E-03
114GO:1903507: negative regulation of nucleic acid-templated transcription9.46E-03
115GO:0010152: pollen maturation1.04E-02
116GO:0000266: mitochondrial fission1.04E-02
117GO:0006810: transport1.06E-02
118GO:0046274: lignin catabolic process1.14E-02
119GO:0034605: cellular response to heat1.24E-02
120GO:0009901: anther dehiscence1.34E-02
121GO:0005985: sucrose metabolic process1.34E-02
122GO:0090351: seedling development1.34E-02
123GO:0046854: phosphatidylinositol phosphorylation1.34E-02
124GO:0009969: xyloglucan biosynthetic process1.34E-02
125GO:0006486: protein glycosylation1.43E-02
126GO:0034976: response to endoplasmic reticulum stress1.45E-02
127GO:0048366: leaf development1.56E-02
128GO:0006487: protein N-linked glycosylation1.56E-02
129GO:0009738: abscisic acid-activated signaling pathway1.57E-02
130GO:0031408: oxylipin biosynthetic process1.79E-02
131GO:0016998: cell wall macromolecule catabolic process1.79E-02
132GO:0098542: defense response to other organism1.79E-02
133GO:2000022: regulation of jasmonic acid mediated signaling pathway1.91E-02
134GO:0007005: mitochondrion organization1.91E-02
135GO:0009693: ethylene biosynthetic process2.03E-02
136GO:0071215: cellular response to abscisic acid stimulus2.03E-02
137GO:0009686: gibberellin biosynthetic process2.03E-02
138GO:0040007: growth2.03E-02
139GO:0009651: response to salt stress2.08E-02
140GO:0018105: peptidyl-serine phosphorylation2.10E-02
141GO:0006817: phosphate ion transport2.16E-02
142GO:0019722: calcium-mediated signaling2.16E-02
143GO:0009306: protein secretion2.16E-02
144GO:0010214: seed coat development2.16E-02
145GO:0009737: response to abscisic acid2.17E-02
146GO:0042631: cellular response to water deprivation2.42E-02
147GO:0010118: stomatal movement2.42E-02
148GO:0006606: protein import into nucleus2.42E-02
149GO:0048653: anther development2.42E-02
150GO:0009960: endosperm development2.55E-02
151GO:0048868: pollen tube development2.55E-02
152GO:0009851: auxin biosynthetic process2.82E-02
153GO:0010193: response to ozone2.96E-02
154GO:0006891: intra-Golgi vesicle-mediated transport2.96E-02
155GO:0009753: response to jasmonic acid2.97E-02
156GO:0031047: gene silencing by RNA3.10E-02
157GO:0010090: trichome morphogenesis3.25E-02
158GO:0007623: circadian rhythm3.52E-02
159GO:0006357: regulation of transcription from RNA polymerase II promoter3.85E-02
160GO:0001666: response to hypoxia3.85E-02
161GO:0009615: response to virus3.85E-02
162GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.00E-02
163GO:0010468: regulation of gene expression4.19E-02
164GO:0015995: chlorophyll biosynthetic process4.32E-02
165GO:0048573: photoperiodism, flowering4.32E-02
166GO:0016049: cell growth4.48E-02
167GO:0009414: response to water deprivation4.49E-02
168GO:0009817: defense response to fungus, incompatible interaction4.65E-02
169GO:0009813: flavonoid biosynthetic process4.81E-02
170GO:0010311: lateral root formation4.81E-02
RankGO TermAdjusted P value
1GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity0.00E+00
2GO:0005522: profilin binding0.00E+00
3GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity0.00E+00
4GO:0010293: abscisic aldehyde oxidase activity0.00E+00
5GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity0.00E+00
6GO:0047734: CDP-glycerol diphosphatase activity0.00E+00
7GO:0046409: p-coumarate 3-hydroxylase activity0.00E+00
8GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity0.00E+00
9GO:2001080: chitosan binding0.00E+00
10GO:0047350: glucuronate-1-phosphate uridylyltransferase activity0.00E+00
11GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
12GO:0010857: calcium-dependent protein kinase activity0.00E+00
13GO:0016301: kinase activity3.36E-11
14GO:0004674: protein serine/threonine kinase activity9.59E-08
15GO:0005524: ATP binding1.64E-06
16GO:0004672: protein kinase activity2.00E-05
17GO:0019888: protein phosphatase regulator activity5.34E-05
18GO:0050373: UDP-arabinose 4-epimerase activity5.77E-05
19GO:0047631: ADP-ribose diphosphatase activity9.10E-05
20GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.20E-04
21GO:0003978: UDP-glucose 4-epimerase activity1.81E-04
22GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.28E-04
23GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity2.97E-04
24GO:0015085: calcium ion transmembrane transporter activity2.97E-04
25GO:0051669: fructan beta-fructosidase activity2.97E-04
26GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity2.97E-04
27GO:0031219: levanase activity2.97E-04
28GO:0003987: acetate-CoA ligase activity2.97E-04
29GO:0004722: protein serine/threonine phosphatase activity3.08E-04
30GO:1990585: hydroxyproline O-arabinosyltransferase activity6.50E-04
31GO:0050377: UDP-glucose 4,6-dehydratase activity6.50E-04
32GO:0004103: choline kinase activity6.50E-04
33GO:0008883: glutamyl-tRNA reductase activity6.50E-04
34GO:0008460: dTDP-glucose 4,6-dehydratase activity6.50E-04
35GO:0010280: UDP-L-rhamnose synthase activity6.50E-04
36GO:0005516: calmodulin binding8.07E-04
37GO:0005388: calcium-transporting ATPase activity9.08E-04
38GO:0004842: ubiquitin-protein transferase activity1.01E-03
39GO:0045548: phenylalanine ammonia-lyase activity1.05E-03
40GO:0003840: gamma-glutamyltransferase activity1.05E-03
41GO:0036374: glutathione hydrolase activity1.05E-03
42GO:0046423: allene-oxide cyclase activity1.05E-03
43GO:0016165: linoleate 13S-lipoxygenase activity1.05E-03
44GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.05E-03
45GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity1.51E-03
46GO:0019201: nucleotide kinase activity1.51E-03
47GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.51E-03
48GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.51E-03
49GO:0019706: protein-cysteine S-palmitoyltransferase activity1.70E-03
50GO:0043015: gamma-tubulin binding2.02E-03
51GO:0019199: transmembrane receptor protein kinase activity2.02E-03
52GO:0004031: aldehyde oxidase activity2.02E-03
53GO:0050302: indole-3-acetaldehyde oxidase activity2.02E-03
54GO:0005253: anion channel activity2.02E-03
55GO:0030246: carbohydrate binding2.24E-03
56GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.58E-03
57GO:0018685: alkane 1-monooxygenase activity2.58E-03
58GO:0002020: protease binding2.58E-03
59GO:0004356: glutamate-ammonia ligase activity2.58E-03
60GO:0000210: NAD+ diphosphatase activity3.19E-03
61GO:0035673: oligopeptide transmembrane transporter activity3.19E-03
62GO:0016208: AMP binding3.19E-03
63GO:0050660: flavin adenine dinucleotide binding3.45E-03
64GO:0003779: actin binding3.49E-03
65GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides3.84E-03
66GO:0004017: adenylate kinase activity3.84E-03
67GO:0019900: kinase binding3.84E-03
68GO:0004559: alpha-mannosidase activity3.84E-03
69GO:0008506: sucrose:proton symporter activity4.53E-03
70GO:0102425: myricetin 3-O-glucosyltransferase activity4.53E-03
71GO:0102360: daphnetin 3-O-glucosyltransferase activity4.53E-03
72GO:0016621: cinnamoyl-CoA reductase activity4.53E-03
73GO:0015140: malate transmembrane transporter activity4.53E-03
74GO:0008143: poly(A) binding4.53E-03
75GO:0004143: diacylglycerol kinase activity4.53E-03
76GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity5.26E-03
77GO:0047893: flavonol 3-O-glucosyltransferase activity5.26E-03
78GO:0052747: sinapyl alcohol dehydrogenase activity5.26E-03
79GO:0004714: transmembrane receptor protein tyrosine kinase activity5.26E-03
80GO:0009931: calcium-dependent protein serine/threonine kinase activity5.52E-03
81GO:0004683: calmodulin-dependent protein kinase activity5.82E-03
82GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.03E-03
83GO:0004430: 1-phosphatidylinositol 4-kinase activity6.03E-03
84GO:0003951: NAD+ kinase activity6.03E-03
85GO:0008142: oxysterol binding6.03E-03
86GO:0004630: phospholipase D activity6.03E-03
87GO:0016207: 4-coumarate-CoA ligase activity6.83E-03
88GO:0047617: acyl-CoA hydrolase activity7.67E-03
89GO:0009055: electron carrier activity7.73E-03
90GO:0008515: sucrose transmembrane transporter activity9.46E-03
91GO:0045551: cinnamyl-alcohol dehydrogenase activity1.04E-02
92GO:0015198: oligopeptide transporter activity1.04E-02
93GO:0008378: galactosyltransferase activity1.04E-02
94GO:0035091: phosphatidylinositol binding1.14E-02
95GO:0008139: nuclear localization sequence binding1.14E-02
96GO:0008061: chitin binding1.34E-02
97GO:0003682: chromatin binding1.36E-02
98GO:0005509: calcium ion binding1.37E-02
99GO:0003714: transcription corepressor activity1.56E-02
100GO:0031625: ubiquitin protein ligase binding1.58E-02
101GO:0035251: UDP-glucosyltransferase activity1.79E-02
102GO:0033612: receptor serine/threonine kinase binding1.79E-02
103GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.09E-02
104GO:0008514: organic anion transmembrane transporter activity2.16E-02
105GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.39E-02
106GO:0016758: transferase activity, transferring hexosyl groups2.48E-02
107GO:0008536: Ran GTPase binding2.55E-02
108GO:0050662: coenzyme binding2.68E-02
109GO:0016853: isomerase activity2.68E-02
110GO:0008565: protein transporter activity3.05E-02
111GO:0004518: nuclease activity3.10E-02
112GO:0051015: actin filament binding3.25E-02
113GO:0008017: microtubule binding3.68E-02
114GO:0008375: acetylglucosaminyltransferase activity4.16E-02
115GO:0030247: polysaccharide binding4.32E-02
116GO:0043565: sequence-specific DNA binding4.85E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane9.24E-11
2GO:0090406: pollen tube2.20E-04
3GO:0005911: cell-cell junction2.97E-04
4GO:0016442: RISC complex2.97E-04
5GO:0010494: cytoplasmic stress granule4.41E-04
6GO:0032580: Golgi cisterna membrane4.90E-04
7GO:0000159: protein phosphatase type 2A complex7.02E-04
8GO:0090404: pollen tube tip7.02E-04
9GO:0048471: perinuclear region of cytoplasm7.02E-04
10GO:0005768: endosome1.22E-03
11GO:0016021: integral component of membrane1.47E-03
12GO:0005737: cytoplasm2.06E-03
13GO:0005794: Golgi apparatus2.94E-03
14GO:0010008: endosome membrane2.98E-03
15GO:0016363: nuclear matrix3.84E-03
16GO:0030173: integral component of Golgi membrane3.84E-03
17GO:0009514: glyoxysome6.03E-03
18GO:0016020: membrane6.32E-03
19GO:0043231: intracellular membrane-bounded organelle8.05E-03
20GO:0005802: trans-Golgi network1.05E-02
21GO:0005938: cell cortex1.14E-02
22GO:0005795: Golgi stack1.34E-02
23GO:0043234: protein complex1.45E-02
24GO:0005635: nuclear envelope1.53E-02
25GO:0005829: cytosol1.68E-02
26GO:0005783: endoplasmic reticulum1.95E-02
27GO:0009506: plasmodesma2.19E-02
28GO:0030136: clathrin-coated vesicle2.29E-02
29GO:0009524: phragmoplast2.69E-02
30GO:0009504: cell plate2.82E-02
31GO:0031965: nuclear membrane2.82E-02
32GO:0000145: exocyst3.10E-02
33GO:0005778: peroxisomal membrane3.55E-02
34GO:0000932: P-body3.85E-02
35GO:0005887: integral component of plasma membrane3.97E-02
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Gene type



Gene DE type