Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G12700

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0006593: ornithine catabolic process0.00E+00
3GO:1903647: negative regulation of chlorophyll catabolic process0.00E+00
4GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
5GO:0042430: indole-containing compound metabolic process0.00E+00
6GO:0046177: D-gluconate catabolic process0.00E+00
7GO:0006073: cellular glucan metabolic process0.00E+00
8GO:0006148: inosine catabolic process5.79E-05
9GO:0010365: positive regulation of ethylene biosynthetic process5.79E-05
10GO:0015812: gamma-aminobutyric acid transport5.79E-05
11GO:0019544: arginine catabolic process to glutamate5.79E-05
12GO:0055114: oxidation-reduction process7.28E-05
13GO:0009651: response to salt stress1.23E-04
14GO:2000379: positive regulation of reactive oxygen species metabolic process1.41E-04
15GO:0009915: phloem sucrose loading1.41E-04
16GO:0002215: defense response to nematode1.41E-04
17GO:0015692: lead ion transport2.40E-04
18GO:0051646: mitochondrion localization2.40E-04
19GO:0042744: hydrogen peroxide catabolic process3.31E-04
20GO:0009413: response to flooding3.49E-04
21GO:0010150: leaf senescence4.24E-04
22GO:0006542: glutamine biosynthetic process4.66E-04
23GO:0009611: response to wounding5.51E-04
24GO:0009816: defense response to bacterium, incompatible interaction5.85E-04
25GO:0009697: salicylic acid biosynthetic process5.92E-04
26GO:0006564: L-serine biosynthetic process5.92E-04
27GO:0002238: response to molecule of fungal origin7.24E-04
28GO:0006561: proline biosynthetic process7.24E-04
29GO:0015691: cadmium ion transport7.24E-04
30GO:0006828: manganese ion transport7.24E-04
31GO:0010189: vitamin E biosynthetic process8.63E-04
32GO:0006102: isocitrate metabolic process1.16E-03
33GO:0006875: cellular metal ion homeostasis1.16E-03
34GO:0009636: response to toxic substance1.28E-03
35GO:0006972: hyperosmotic response1.32E-03
36GO:0015996: chlorophyll catabolic process1.32E-03
37GO:0071555: cell wall organization1.54E-03
38GO:0048354: mucilage biosynthetic process involved in seed coat development1.65E-03
39GO:0010192: mucilage biosynthetic process1.83E-03
40GO:0009624: response to nematode2.14E-03
41GO:0012501: programmed cell death2.21E-03
42GO:0002213: defense response to insect2.21E-03
43GO:0009725: response to hormone2.41E-03
44GO:0010102: lateral root morphogenesis2.41E-03
45GO:0006807: nitrogen compound metabolic process2.41E-03
46GO:0009266: response to temperature stimulus2.62E-03
47GO:0002237: response to molecule of bacterial origin2.62E-03
48GO:0009058: biosynthetic process2.82E-03
49GO:0042343: indole glucosinolate metabolic process2.82E-03
50GO:0019762: glucosinolate catabolic process3.04E-03
51GO:0006636: unsaturated fatty acid biosynthetic process3.04E-03
52GO:0048511: rhythmic process3.72E-03
53GO:0098542: defense response to other organism3.72E-03
54GO:0030245: cellulose catabolic process3.95E-03
55GO:0016226: iron-sulfur cluster assembly3.95E-03
56GO:0009625: response to insect4.20E-03
57GO:0006817: phosphate ion transport4.44E-03
58GO:0010118: stomatal movement4.95E-03
59GO:0010154: fruit development5.21E-03
60GO:0006662: glycerol ether metabolic process5.21E-03
61GO:0055072: iron ion homeostasis5.75E-03
62GO:1901657: glycosyl compound metabolic process6.59E-03
63GO:0009414: response to water deprivation7.56E-03
64GO:0044550: secondary metabolite biosynthetic process7.63E-03
65GO:0006979: response to oxidative stress7.88E-03
66GO:0042128: nitrate assimilation8.40E-03
67GO:0010411: xyloglucan metabolic process8.71E-03
68GO:0008219: cell death9.36E-03
69GO:0009817: defense response to fungus, incompatible interaction9.36E-03
70GO:0009813: flavonoid biosynthetic process9.69E-03
71GO:0009407: toxin catabolic process1.00E-02
72GO:0010043: response to zinc ion1.04E-02
73GO:0006099: tricarboxylic acid cycle1.14E-02
74GO:0034599: cellular response to oxidative stress1.14E-02
75GO:0030001: metal ion transport1.21E-02
76GO:0006631: fatty acid metabolic process1.25E-02
77GO:0042542: response to hydrogen peroxide1.28E-02
78GO:0005975: carbohydrate metabolic process1.33E-02
79GO:0042546: cell wall biogenesis1.36E-02
80GO:0046686: response to cadmium ion1.37E-02
81GO:0006855: drug transmembrane transport1.47E-02
82GO:0031347: regulation of defense response1.51E-02
83GO:0042538: hyperosmotic salinity response1.55E-02
84GO:0009809: lignin biosynthetic process1.63E-02
85GO:0009626: plant-type hypersensitive response1.92E-02
86GO:0006413: translational initiation2.94E-02
87GO:0006508: proteolysis3.21E-02
88GO:0009617: response to bacterium3.51E-02
89GO:0042742: defense response to bacterium3.73E-02
90GO:0009733: response to auxin4.19E-02
RankGO TermAdjusted P value
1GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
2GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
3GO:0046316: gluconokinase activity0.00E+00
4GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
5GO:0032441: pheophorbide a oxygenase activity0.00E+00
6GO:0010176: homogentisate phytyltransferase activity0.00E+00
7GO:0004867: serine-type endopeptidase inhibitor activity1.88E-06
8GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor5.79E-05
9GO:0016229: steroid dehydrogenase activity5.79E-05
10GO:0070401: NADP+ binding5.79E-05
11GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity5.79E-05
12GO:0047782: coniferin beta-glucosidase activity5.79E-05
13GO:0045437: uridine nucleosidase activity5.79E-05
14GO:0015185: gamma-aminobutyric acid transmembrane transporter activity5.79E-05
15GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.23E-04
16GO:0008517: folic acid transporter activity1.41E-04
17GO:0004566: beta-glucuronidase activity1.41E-04
18GO:0004617: phosphoglycerate dehydrogenase activity1.41E-04
19GO:0004047: aminomethyltransferase activity1.41E-04
20GO:0047724: inosine nucleosidase activity1.41E-04
21GO:0047517: 1,4-beta-D-xylan synthase activity1.41E-04
22GO:0010277: chlorophyllide a oxygenase [overall] activity2.40E-04
23GO:0004449: isocitrate dehydrogenase (NAD+) activity3.49E-04
24GO:0004301: epoxide hydrolase activity4.66E-04
25GO:0004659: prenyltransferase activity4.66E-04
26GO:0004356: glutamate-ammonia ligase activity5.92E-04
27GO:0016798: hydrolase activity, acting on glycosyl bonds6.49E-04
28GO:0102483: scopolin beta-glucosidase activity6.49E-04
29GO:0020037: heme binding6.54E-04
30GO:0004866: endopeptidase inhibitor activity7.24E-04
31GO:0008200: ion channel inhibitor activity7.24E-04
32GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity7.24E-04
33GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity7.24E-04
34GO:0004601: peroxidase activity7.34E-04
35GO:0008422: beta-glucosidase activity9.76E-04
36GO:0015103: inorganic anion transmembrane transporter activity1.01E-03
37GO:0004033: aldo-keto reductase (NADP) activity1.16E-03
38GO:0051287: NAD binding1.37E-03
39GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.48E-03
40GO:0016844: strictosidine synthase activity1.65E-03
41GO:0005384: manganese ion transmembrane transporter activity1.65E-03
42GO:0008559: xenobiotic-transporting ATPase activity2.02E-03
43GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.62E-03
44GO:0004252: serine-type endopeptidase activity2.96E-03
45GO:0030170: pyridoxal phosphate binding2.96E-03
46GO:0051536: iron-sulfur cluster binding3.26E-03
47GO:0008134: transcription factor binding3.26E-03
48GO:0035251: UDP-glucosyltransferase activity3.72E-03
49GO:0008810: cellulase activity4.20E-03
50GO:0047134: protein-disulfide reductase activity4.69E-03
51GO:0005199: structural constituent of cell wall5.21E-03
52GO:0046873: metal ion transmembrane transporter activity5.21E-03
53GO:0004791: thioredoxin-disulfide reductase activity5.48E-03
54GO:0016762: xyloglucan:xyloglucosyl transferase activity6.02E-03
55GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.59E-03
56GO:0016597: amino acid binding7.47E-03
57GO:0051213: dioxygenase activity7.78E-03
58GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen9.08E-03
59GO:0046872: metal ion binding9.74E-03
60GO:0030145: manganese ion binding1.04E-02
61GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.11E-02
62GO:0004364: glutathione transferase activity1.28E-02
63GO:0051537: 2 iron, 2 sulfur cluster binding1.40E-02
64GO:0008234: cysteine-type peptidase activity1.75E-02
65GO:0045735: nutrient reservoir activity1.84E-02
66GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.88E-02
67GO:0015035: protein disulfide oxidoreductase activity2.14E-02
68GO:0016740: transferase activity2.25E-02
69GO:0019825: oxygen binding2.63E-02
70GO:0005507: copper ion binding2.63E-02
71GO:0008270: zinc ion binding3.03E-02
72GO:0008194: UDP-glycosyltransferase activity3.35E-02
73GO:0003743: translation initiation factor activity3.46E-02
74GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.67E-02
75GO:0042802: identical protein binding3.67E-02
76GO:0005506: iron ion binding3.68E-02
77GO:0044212: transcription regulatory region DNA binding3.73E-02
78GO:0000287: magnesium ion binding4.17E-02
79GO:0004497: monooxygenase activity4.92E-02
RankGO TermAdjusted P value
1GO:0005576: extracellular region5.30E-05
2GO:0055035: plastid thylakoid membrane5.92E-04
3GO:0005777: peroxisome6.58E-04
4GO:0000325: plant-type vacuole8.23E-04
5GO:0005618: cell wall8.29E-04
6GO:0005765: lysosomal membrane2.02E-03
7GO:0005759: mitochondrial matrix3.35E-03
8GO:0005774: vacuolar membrane1.01E-02
9GO:0031966: mitochondrial membrane1.55E-02
10GO:0009706: chloroplast inner membrane2.10E-02
11GO:0005829: cytosol2.86E-02
12GO:0005615: extracellular space3.35E-02
13GO:0048046: apoplast3.96E-02
14GO:0005737: cytoplasm4.52E-02
15GO:0009505: plant-type cell wall4.67E-02
16GO:0031969: chloroplast membrane4.92E-02
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Gene type



Gene DE type