GO Enrichment Analysis of Co-expressed Genes with
AT3G11710
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 2 | GO:0006413: translational initiation | 5.75E-07 |
| 3 | GO:0046686: response to cadmium ion | 1.33E-05 |
| 4 | GO:1990641: response to iron ion starvation | 1.39E-05 |
| 5 | GO:0080173: male-female gamete recognition during double fertilization | 1.39E-05 |
| 6 | GO:1901181: negative regulation of cellular response to caffeine | 1.39E-05 |
| 7 | GO:0043609: regulation of carbon utilization | 1.39E-05 |
| 8 | GO:0019521: D-gluconate metabolic process | 3.65E-05 |
| 9 | GO:0019632: shikimate metabolic process | 3.65E-05 |
| 10 | GO:0006101: citrate metabolic process | 3.65E-05 |
| 11 | GO:0080009: mRNA methylation | 3.65E-05 |
| 12 | GO:0031538: negative regulation of anthocyanin metabolic process | 3.65E-05 |
| 13 | GO:0031204: posttranslational protein targeting to membrane, translocation | 3.65E-05 |
| 14 | GO:0010501: RNA secondary structure unwinding | 4.04E-05 |
| 15 | GO:0032465: regulation of cytokinesis | 9.94E-05 |
| 16 | GO:0071329: cellular response to sucrose stimulus | 9.94E-05 |
| 17 | GO:0043967: histone H4 acetylation | 9.94E-05 |
| 18 | GO:0046345: abscisic acid catabolic process | 1.37E-04 |
| 19 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.37E-04 |
| 20 | GO:0006097: glyoxylate cycle | 1.78E-04 |
| 21 | GO:0043248: proteasome assembly | 2.22E-04 |
| 22 | GO:0009423: chorismate biosynthetic process | 2.68E-04 |
| 23 | GO:0043966: histone H3 acetylation | 2.68E-04 |
| 24 | GO:0006368: transcription elongation from RNA polymerase II promoter | 3.15E-04 |
| 25 | GO:0006102: isocitrate metabolic process | 3.65E-04 |
| 26 | GO:0010928: regulation of auxin mediated signaling pathway | 3.65E-04 |
| 27 | GO:0035265: organ growth | 3.65E-04 |
| 28 | GO:0006875: cellular metal ion homeostasis | 3.65E-04 |
| 29 | GO:0006457: protein folding | 4.56E-04 |
| 30 | GO:0006098: pentose-phosphate shunt | 4.68E-04 |
| 31 | GO:2000024: regulation of leaf development | 4.68E-04 |
| 32 | GO:0006783: heme biosynthetic process | 4.68E-04 |
| 33 | GO:0000373: Group II intron splicing | 4.68E-04 |
| 34 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.23E-04 |
| 35 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.78E-04 |
| 36 | GO:0009651: response to salt stress | 5.98E-04 |
| 37 | GO:0008285: negative regulation of cell proliferation | 6.34E-04 |
| 38 | GO:0009073: aromatic amino acid family biosynthetic process | 6.34E-04 |
| 39 | GO:0006352: DNA-templated transcription, initiation | 6.34E-04 |
| 40 | GO:0010152: pollen maturation | 6.93E-04 |
| 41 | GO:0034976: response to endoplasmic reticulum stress | 9.38E-04 |
| 42 | GO:0006874: cellular calcium ion homeostasis | 1.07E-03 |
| 43 | GO:0010073: meristem maintenance | 1.07E-03 |
| 44 | GO:0007005: mitochondrion organization | 1.20E-03 |
| 45 | GO:0009561: megagametogenesis | 1.34E-03 |
| 46 | GO:0008284: positive regulation of cell proliferation | 1.41E-03 |
| 47 | GO:0010197: polar nucleus fusion | 1.56E-03 |
| 48 | GO:0007264: small GTPase mediated signal transduction | 1.88E-03 |
| 49 | GO:0030163: protein catabolic process | 1.96E-03 |
| 50 | GO:0009793: embryo development ending in seed dormancy | 2.25E-03 |
| 51 | GO:0016126: sterol biosynthetic process | 2.30E-03 |
| 52 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.30E-03 |
| 53 | GO:0015995: chlorophyll biosynthetic process | 2.57E-03 |
| 54 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.57E-03 |
| 55 | GO:0009735: response to cytokinin | 2.80E-03 |
| 56 | GO:0006099: tricarboxylic acid cycle | 3.32E-03 |
| 57 | GO:0006839: mitochondrial transport | 3.52E-03 |
| 58 | GO:0009640: photomorphogenesis | 3.83E-03 |
| 59 | GO:0008283: cell proliferation | 3.83E-03 |
| 60 | GO:0009846: pollen germination | 4.47E-03 |
| 61 | GO:0006364: rRNA processing | 4.69E-03 |
| 62 | GO:0006096: glycolytic process | 5.26E-03 |
| 63 | GO:0006979: response to oxidative stress | 6.20E-03 |
| 64 | GO:0009790: embryo development | 7.78E-03 |
| 65 | GO:0016036: cellular response to phosphate starvation | 8.32E-03 |
| 66 | GO:0010150: leaf senescence | 8.74E-03 |
| 67 | GO:0010468: regulation of gene expression | 9.90E-03 |
| 68 | GO:0009860: pollen tube growth | 1.25E-02 |
| 69 | GO:0045892: negative regulation of transcription, DNA-templated | 1.59E-02 |
| 70 | GO:0006886: intracellular protein transport | 1.61E-02 |
| 71 | GO:0009408: response to heat | 1.82E-02 |
| 72 | GO:0008152: metabolic process | 1.95E-02 |
| 73 | GO:0009734: auxin-activated signaling pathway | 2.33E-02 |
| 74 | GO:0009908: flower development | 2.55E-02 |
| 75 | GO:0009738: abscisic acid-activated signaling pathway | 2.68E-02 |
| 76 | GO:0045893: positive regulation of transcription, DNA-templated | 3.03E-02 |
| 77 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.41E-02 |
| 78 | GO:0030154: cell differentiation | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004764: shikimate 3-dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0004421: hydroxymethylglutaryl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0003855: 3-dehydroquinate dehydratase activity | 0.00E+00 |
| 4 | GO:0003743: translation initiation factor activity | 9.50E-07 |
| 5 | GO:0030371: translation repressor activity | 1.39E-05 |
| 6 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.39E-05 |
| 7 | GO:0004655: porphobilinogen synthase activity | 1.39E-05 |
| 8 | GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity | 3.65E-05 |
| 9 | GO:0003994: aconitate hydratase activity | 3.65E-05 |
| 10 | GO:0019829: cation-transporting ATPase activity | 6.55E-05 |
| 11 | GO:0004004: ATP-dependent RNA helicase activity | 1.04E-04 |
| 12 | GO:0000993: RNA polymerase II core binding | 1.37E-04 |
| 13 | GO:0046527: glucosyltransferase activity | 1.37E-04 |
| 14 | GO:0031369: translation initiation factor binding | 2.22E-04 |
| 15 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.68E-04 |
| 16 | GO:0008026: ATP-dependent helicase activity | 4.04E-04 |
| 17 | GO:0004743: pyruvate kinase activity | 5.23E-04 |
| 18 | GO:0030955: potassium ion binding | 5.23E-04 |
| 19 | GO:0015114: phosphate ion transmembrane transporter activity | 7.52E-04 |
| 20 | GO:0005388: calcium-transporting ATPase activity | 7.52E-04 |
| 21 | GO:0003729: mRNA binding | 1.29E-03 |
| 22 | GO:0004402: histone acetyltransferase activity | 1.49E-03 |
| 23 | GO:0003713: transcription coactivator activity | 1.56E-03 |
| 24 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.66E-03 |
| 25 | GO:0050661: NADP binding | 3.52E-03 |
| 26 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.52E-03 |
| 27 | GO:0005198: structural molecule activity | 4.15E-03 |
| 28 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 5.62E-03 |
| 29 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 5.62E-03 |
| 30 | GO:0051082: unfolded protein binding | 5.98E-03 |
| 31 | GO:0004386: helicase activity | 6.35E-03 |
| 32 | GO:0008565: protein transporter activity | 7.91E-03 |
| 33 | GO:0008194: UDP-glycosyltransferase activity | 9.45E-03 |
| 34 | GO:0000287: magnesium ion binding | 1.17E-02 |
| 35 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.57E-02 |
| 36 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.70E-02 |
| 37 | GO:0003924: GTPase activity | 1.82E-02 |
| 38 | GO:0005524: ATP binding | 2.54E-02 |
| 39 | GO:0000166: nucleotide binding | 2.74E-02 |
| 40 | GO:0005507: copper ion binding | 3.53E-02 |
| 41 | GO:0005525: GTP binding | 3.91E-02 |
| 42 | GO:0005515: protein binding | 4.11E-02 |
| 43 | GO:0005509: calcium ion binding | 4.28E-02 |
| 44 | GO:0044212: transcription regulatory region DNA binding | 4.54E-02 |
| 45 | GO:0008270: zinc ion binding | 4.60E-02 |
| 46 | GO:0003723: RNA binding | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034455: t-UTP complex | 0.00E+00 |
| 2 | GO:0036396: MIS complex | 0.00E+00 |
| 3 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 4 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.68E-06 |
| 5 | GO:0005829: cytosol | 8.07E-06 |
| 6 | GO:0008023: transcription elongation factor complex | 1.39E-05 |
| 7 | GO:0033588: Elongator holoenzyme complex | 9.94E-05 |
| 8 | GO:0005730: nucleolus | 2.02E-04 |
| 9 | GO:0030127: COPII vesicle coat | 2.22E-04 |
| 10 | GO:0031597: cytosolic proteasome complex | 2.68E-04 |
| 11 | GO:0000123: histone acetyltransferase complex | 3.15E-04 |
| 12 | GO:0008180: COP9 signalosome | 4.68E-04 |
| 13 | GO:0005774: vacuolar membrane | 6.27E-04 |
| 14 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.34E-04 |
| 15 | GO:0031307: integral component of mitochondrial outer membrane | 6.93E-04 |
| 16 | GO:0005618: cell wall | 7.68E-04 |
| 17 | GO:0030176: integral component of endoplasmic reticulum membrane | 8.75E-04 |
| 18 | GO:0043234: protein complex | 9.38E-04 |
| 19 | GO:0009506: plasmodesma | 1.03E-03 |
| 20 | GO:0016592: mediator complex | 1.88E-03 |
| 21 | GO:0005788: endoplasmic reticulum lumen | 2.39E-03 |
| 22 | GO:0005739: mitochondrion | 4.35E-03 |
| 23 | GO:0000502: proteasome complex | 4.69E-03 |
| 24 | GO:0010008: endosome membrane | 5.38E-03 |
| 25 | GO:0016607: nuclear speck | 5.38E-03 |
| 26 | GO:0005759: mitochondrial matrix | 8.19E-03 |
| 27 | GO:0009570: chloroplast stroma | 8.43E-03 |
| 28 | GO:0005783: endoplasmic reticulum | 9.13E-03 |
| 29 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.27E-02 |
| 30 | GO:0005743: mitochondrial inner membrane | 1.73E-02 |
| 31 | GO:0043231: intracellular membrane-bounded organelle | 1.95E-02 |
| 32 | GO:0009507: chloroplast | 1.98E-02 |
| 33 | GO:0005887: integral component of plasma membrane | 2.27E-02 |
| 34 | GO:0005777: peroxisome | 3.03E-02 |
| 35 | GO:0005802: trans-Golgi network | 3.84E-02 |
| 36 | GO:0005768: endosome | 4.21E-02 |