GO Enrichment Analysis of Co-expressed Genes with
AT3G11400
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 6 | GO:0006412: translation | 7.38E-33 |
| 7 | GO:0042254: ribosome biogenesis | 1.49E-13 |
| 8 | GO:0045039: protein import into mitochondrial inner membrane | 2.51E-06 |
| 9 | GO:0000470: maturation of LSU-rRNA | 2.79E-05 |
| 10 | GO:0006364: rRNA processing | 3.25E-05 |
| 11 | GO:0030490: maturation of SSU-rRNA | 1.14E-04 |
| 12 | GO:0000494: box C/D snoRNA 3'-end processing | 1.14E-04 |
| 13 | GO:0019877: diaminopimelate biosynthetic process | 1.14E-04 |
| 14 | GO:1990258: histone glutamine methylation | 1.14E-04 |
| 15 | GO:0010162: seed dormancy process | 1.55E-04 |
| 16 | GO:0006626: protein targeting to mitochondrion | 2.41E-04 |
| 17 | GO:0045905: positive regulation of translational termination | 2.65E-04 |
| 18 | GO:0045901: positive regulation of translational elongation | 2.65E-04 |
| 19 | GO:0034470: ncRNA processing | 2.65E-04 |
| 20 | GO:0048569: post-embryonic animal organ development | 2.65E-04 |
| 21 | GO:0006452: translational frameshifting | 2.65E-04 |
| 22 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.65E-04 |
| 23 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.83E-04 |
| 24 | GO:0006556: S-adenosylmethionine biosynthetic process | 4.38E-04 |
| 25 | GO:0009294: DNA mediated transformation | 5.51E-04 |
| 26 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 6.29E-04 |
| 27 | GO:0009855: determination of bilateral symmetry | 6.29E-04 |
| 28 | GO:0008033: tRNA processing | 6.98E-04 |
| 29 | GO:0000460: maturation of 5.8S rRNA | 8.35E-04 |
| 30 | GO:0051781: positive regulation of cell division | 8.35E-04 |
| 31 | GO:0042274: ribosomal small subunit biogenesis | 8.35E-04 |
| 32 | GO:0042273: ribosomal large subunit biogenesis | 8.35E-04 |
| 33 | GO:0051205: protein insertion into membrane | 8.35E-04 |
| 34 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.05E-03 |
| 35 | GO:0006461: protein complex assembly | 1.05E-03 |
| 36 | GO:0010375: stomatal complex patterning | 1.05E-03 |
| 37 | GO:0031167: rRNA methylation | 1.05E-03 |
| 38 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.54E-03 |
| 39 | GO:0009955: adaxial/abaxial pattern specification | 1.54E-03 |
| 40 | GO:0010374: stomatal complex development | 1.81E-03 |
| 41 | GO:0080186: developmental vegetative growth | 1.81E-03 |
| 42 | GO:0000028: ribosomal small subunit assembly | 2.09E-03 |
| 43 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.09E-03 |
| 44 | GO:0001558: regulation of cell growth | 2.39E-03 |
| 45 | GO:0022900: electron transport chain | 2.39E-03 |
| 46 | GO:0001510: RNA methylation | 2.39E-03 |
| 47 | GO:0006259: DNA metabolic process | 3.36E-03 |
| 48 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.71E-03 |
| 49 | GO:0006879: cellular iron ion homeostasis | 3.71E-03 |
| 50 | GO:0006913: nucleocytoplasmic transport | 3.71E-03 |
| 51 | GO:0006414: translational elongation | 3.84E-03 |
| 52 | GO:0012501: programmed cell death | 4.06E-03 |
| 53 | GO:0006820: anion transport | 4.06E-03 |
| 54 | GO:0000027: ribosomal large subunit assembly | 6.03E-03 |
| 55 | GO:0030150: protein import into mitochondrial matrix | 6.03E-03 |
| 56 | GO:0051302: regulation of cell division | 6.45E-03 |
| 57 | GO:0016226: iron-sulfur cluster assembly | 7.34E-03 |
| 58 | GO:0007005: mitochondrion organization | 7.34E-03 |
| 59 | GO:0006730: one-carbon metabolic process | 7.34E-03 |
| 60 | GO:0040007: growth | 7.79E-03 |
| 61 | GO:0009693: ethylene biosynthetic process | 7.79E-03 |
| 62 | GO:0006413: translational initiation | 8.39E-03 |
| 63 | GO:0006606: protein import into nucleus | 9.23E-03 |
| 64 | GO:0010197: polar nucleus fusion | 9.73E-03 |
| 65 | GO:0009960: endosperm development | 9.73E-03 |
| 66 | GO:0046686: response to cadmium ion | 1.19E-02 |
| 67 | GO:0071281: cellular response to iron ion | 1.24E-02 |
| 68 | GO:0016049: cell growth | 1.70E-02 |
| 69 | GO:0006811: ion transport | 1.89E-02 |
| 70 | GO:0048527: lateral root development | 1.96E-02 |
| 71 | GO:0010043: response to zinc ion | 1.96E-02 |
| 72 | GO:0006839: mitochondrial transport | 2.29E-02 |
| 73 | GO:0000154: rRNA modification | 2.72E-02 |
| 74 | GO:0015031: protein transport | 3.31E-02 |
| 75 | GO:0016569: covalent chromatin modification | 3.81E-02 |
| 76 | GO:0009553: embryo sac development | 3.89E-02 |
| 77 | GO:0006396: RNA processing | 4.06E-02 |
| 78 | GO:0009735: response to cytokinin | 4.15E-02 |
| 79 | GO:0000398: mRNA splicing, via spliceosome | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 1.27E-39 |
| 2 | GO:0003746: translation elongation factor activity | 3.01E-07 |
| 3 | GO:0001055: RNA polymerase II activity | 2.06E-06 |
| 4 | GO:0003723: RNA binding | 2.12E-06 |
| 5 | GO:0030515: snoRNA binding | 5.34E-05 |
| 6 | GO:0019843: rRNA binding | 9.66E-05 |
| 7 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 1.14E-04 |
| 8 | GO:1990259: histone-glutamine methyltransferase activity | 1.14E-04 |
| 9 | GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase | 1.14E-04 |
| 10 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.46E-04 |
| 11 | GO:0001054: RNA polymerase I activity | 1.82E-04 |
| 12 | GO:0001056: RNA polymerase III activity | 2.11E-04 |
| 13 | GO:0036455: iron-sulfur transferase activity | 2.65E-04 |
| 14 | GO:0043021: ribonucleoprotein complex binding | 2.65E-04 |
| 15 | GO:0004407: histone deacetylase activity | 3.83E-04 |
| 16 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.24E-04 |
| 17 | GO:0008649: rRNA methyltransferase activity | 4.38E-04 |
| 18 | GO:0004478: methionine adenosyltransferase activity | 4.38E-04 |
| 19 | GO:0070181: small ribosomal subunit rRNA binding | 4.38E-04 |
| 20 | GO:0008198: ferrous iron binding | 1.05E-03 |
| 21 | GO:0004040: amidase activity | 1.05E-03 |
| 22 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.54E-03 |
| 23 | GO:0008235: metalloexopeptidase activity | 1.81E-03 |
| 24 | GO:0043022: ribosome binding | 2.09E-03 |
| 25 | GO:0015288: porin activity | 2.09E-03 |
| 26 | GO:0000166: nucleotide binding | 2.09E-03 |
| 27 | GO:0008308: voltage-gated anion channel activity | 2.39E-03 |
| 28 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.42E-03 |
| 29 | GO:0003678: DNA helicase activity | 2.70E-03 |
| 30 | GO:0003729: mRNA binding | 2.91E-03 |
| 31 | GO:0044183: protein binding involved in protein folding | 3.71E-03 |
| 32 | GO:0000049: tRNA binding | 4.06E-03 |
| 33 | GO:0015114: phosphate ion transmembrane transporter activity | 4.43E-03 |
| 34 | GO:0015266: protein channel activity | 4.43E-03 |
| 35 | GO:0008026: ATP-dependent helicase activity | 5.53E-03 |
| 36 | GO:0031418: L-ascorbic acid binding | 6.03E-03 |
| 37 | GO:0008565: protein transporter activity | 7.80E-03 |
| 38 | GO:0008536: Ran GTPase binding | 9.73E-03 |
| 39 | GO:0010181: FMN binding | 1.02E-02 |
| 40 | GO:0003743: translation initiation factor activity | 1.05E-02 |
| 41 | GO:0008375: acetylglucosaminyltransferase activity | 1.58E-02 |
| 42 | GO:0004004: ATP-dependent RNA helicase activity | 1.64E-02 |
| 43 | GO:0050897: cobalt ion binding | 1.96E-02 |
| 44 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.09E-02 |
| 45 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.65E-02 |
| 46 | GO:0005198: structural molecule activity | 2.72E-02 |
| 47 | GO:0008234: cysteine-type peptidase activity | 3.33E-02 |
| 48 | GO:0051082: unfolded protein binding | 3.98E-02 |
| 49 | GO:0016829: lyase activity | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0005840: ribosome | 7.89E-29 |
| 3 | GO:0022626: cytosolic ribosome | 7.52E-28 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 1.90E-26 |
| 5 | GO:0005730: nucleolus | 2.55E-26 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 4.78E-19 |
| 7 | GO:0009506: plasmodesma | 2.57E-08 |
| 8 | GO:0005829: cytosol | 7.67E-08 |
| 9 | GO:0005737: cytoplasm | 2.64E-06 |
| 10 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.76E-06 |
| 11 | GO:0005618: cell wall | 3.39E-06 |
| 12 | GO:0032040: small-subunit processome | 4.64E-06 |
| 13 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.64E-06 |
| 14 | GO:0031428: box C/D snoRNP complex | 2.79E-05 |
| 15 | GO:0005773: vacuole | 6.59E-05 |
| 16 | GO:0005774: vacuolar membrane | 7.35E-05 |
| 17 | GO:0005742: mitochondrial outer membrane translocase complex | 8.78E-05 |
| 18 | GO:0005736: DNA-directed RNA polymerase I complex | 1.08E-04 |
| 19 | GO:0005666: DNA-directed RNA polymerase III complex | 1.31E-04 |
| 20 | GO:0015934: large ribosomal subunit | 1.79E-04 |
| 21 | GO:0070545: PeBoW complex | 2.65E-04 |
| 22 | GO:0000419: DNA-directed RNA polymerase V complex | 3.44E-04 |
| 23 | GO:0005741: mitochondrial outer membrane | 4.64E-04 |
| 24 | GO:0005834: heterotrimeric G-protein complex | 5.69E-04 |
| 25 | GO:0005743: mitochondrial inner membrane | 7.93E-04 |
| 26 | GO:0005759: mitochondrial matrix | 1.16E-03 |
| 27 | GO:0005851: eukaryotic translation initiation factor 2B complex | 1.29E-03 |
| 28 | GO:0030529: intracellular ribonucleoprotein complex | 1.30E-03 |
| 29 | GO:0016272: prefoldin complex | 1.54E-03 |
| 30 | GO:0031359: integral component of chloroplast outer membrane | 1.81E-03 |
| 31 | GO:0030687: preribosome, large subunit precursor | 1.81E-03 |
| 32 | GO:0046930: pore complex | 2.39E-03 |
| 33 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.54E-03 |
| 34 | GO:0015030: Cajal body | 3.02E-03 |
| 35 | GO:0019013: viral nucleocapsid | 4.43E-03 |
| 36 | GO:0005747: mitochondrial respiratory chain complex I | 4.48E-03 |
| 37 | GO:0016020: membrane | 4.68E-03 |
| 38 | GO:0005758: mitochondrial intermembrane space | 6.03E-03 |
| 39 | GO:0005654: nucleoplasm | 6.35E-03 |
| 40 | GO:0015935: small ribosomal subunit | 6.89E-03 |
| 41 | GO:0016592: mediator complex | 1.18E-02 |
| 42 | GO:0005622: intracellular | 2.08E-02 |
| 43 | GO:0005739: mitochondrion | 2.58E-02 |
| 44 | GO:0005635: nuclear envelope | 3.25E-02 |
| 45 | GO:0005681: spliceosomal complex | 3.49E-02 |
| 46 | GO:0005732: small nucleolar ribonucleoprotein complex | 4.23E-02 |