co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G11220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
2	GO:0006413: translational initiation	5.19E-06
3	GO:0002143: tRNA wobble position uridine thiolation	6.06E-06
4	GO:0006430: lysyl-tRNA aminoacylation	6.06E-06
5	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.65E-05
6	GO:0030187: melatonin biosynthetic process	1.65E-05
7	GO:0080009: mRNA methylation	1.65E-05
8	GO:0006556: S-adenosylmethionine biosynthetic process	3.04E-05
9	GO:0000460: maturation of 5.8S rRNA	6.61E-05
10	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	6.61E-05
11	GO:0000470: maturation of LSU-rRNA	1.10E-04
12	GO:0043248: proteasome assembly	1.10E-04
13	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.10E-04
14	GO:0051555: flavonol biosynthetic process	3.02E-04
15	GO:0006352: DNA-templated transcription, initiation	3.33E-04
16	GO:0046686: response to cadmium ion	3.84E-04
17	GO:0006730: one-carbon metabolic process	6.40E-04
18	GO:0009693: ethylene biosynthetic process	6.76E-04
19	GO:0008152: metabolic process	7.37E-04
20	GO:0010501: RNA secondary structure unwinding	7.91E-04
21	GO:0030163: protein catabolic process	1.03E-03
22	GO:0071281: cellular response to iron ion	1.03E-03
23	GO:0016126: sterol biosynthetic process	1.20E-03
24	GO:0009640: photomorphogenesis	1.98E-03
25	GO:0009809: lignin biosynthetic process	2.41E-03
26	GO:0006364: rRNA processing	2.41E-03
27	GO:0006417: regulation of translation	2.58E-03
28	GO:0006096: glycolytic process	2.70E-03
29	GO:0009553: embryo sac development	3.00E-03
30	GO:0010150: leaf senescence	4.43E-03
31	GO:0010468: regulation of gene expression	5.00E-03
32	GO:0009651: response to salt stress	7.58E-03
33	GO:0032259: methylation	8.84E-03
34	GO:0006412: translation	1.18E-02
35	GO:0009908: flower development	1.27E-02
36	GO:0009555: pollen development	1.37E-02
37	GO:0006511: ubiquitin-dependent protein catabolic process	1.70E-02
38	GO:0009793: embryo development ending in seed dormancy	4.11E-02
39	GO:0050832: defense response to fungus	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0047763: caffeate O-methyltransferase activity	0.00E+00
2	GO:0030755: quercetin 3-O-methyltransferase activity	0.00E+00
3	GO:0004421: hydroxymethylglutaryl-CoA synthase activity	0.00E+00
4	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
5	GO:0030744: luteolin O-methyltransferase activity	0.00E+00
6	GO:0033799: myricetin 3'-O-methyltransferase activity	0.00E+00
7	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
8	GO:0004824: lysine-tRNA ligase activity	6.06E-06
9	GO:0030371: translation repressor activity	6.06E-06
10	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	6.06E-06
11	GO:0017096: acetylserotonin O-methyltransferase activity	6.06E-06
12	GO:0003743: translation initiation factor activity	7.64E-06
13	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	1.65E-05
14	GO:0043021: ribonucleoprotein complex binding	1.65E-05
15	GO:0004478: methionine adenosyltransferase activity	3.04E-05
16	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	3.04E-05
17	GO:0004792: thiosulfate sulfurtransferase activity	4.72E-05
18	GO:0046527: glucosyltransferase activity	6.61E-05
19	GO:0008641: small protein activating enzyme activity	8.72E-05
20	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.23E-04
21	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.23E-04
22	GO:0008194: UDP-glycosyltransferase activity	2.71E-04
23	GO:0004743: pyruvate kinase activity	2.72E-04
24	GO:0030955: potassium ion binding	2.72E-04
25	GO:0003729: mRNA binding	3.62E-04
26	GO:0004004: ATP-dependent RNA helicase activity	1.34E-03
27	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.38E-03
28	GO:0005198: structural molecule activity	2.14E-03
29	GO:0008026: ATP-dependent helicase activity	3.18E-03
30	GO:0004386: helicase activity	3.24E-03
31	GO:0000287: magnesium ion binding	5.91E-03
32	GO:0000166: nucleotide binding	1.37E-02
33	GO:0005524: ATP binding	1.58E-02
34	GO:0003723: RNA binding	1.77E-02
35	GO:0046872: metal ion binding	2.04E-02
36	GO:0003824: catalytic activity	2.41E-02
37	GO:0005515: protein binding	2.44E-02
38	GO:0046983: protein dimerization activity	2.77E-02
39	GO:0016787: hydrolase activity	3.89E-02

Rank	GO Term	Adjusted P value
1	GO:0036396: MIS complex	0.00E+00
2	GO:0005829: cytosol	2.65E-08
3	GO:0009506: plasmodesma	1.22E-05
4	GO:0070545: PeBoW complex	1.65E-05
5	GO:0031597: cytosolic proteasome complex	1.34E-04
6	GO:0030687: preribosome, large subunit precursor	1.60E-04
7	GO:0008180: COP9 signalosome	2.43E-04
8	GO:0005852: eukaryotic translation initiation factor 3 complex	3.33E-04
9	GO:0008541: proteasome regulatory particle, lid subcomplex	3.33E-04
10	GO:0005737: cytoplasm	3.65E-04
11	GO:0043231: intracellular membrane-bounded organelle	7.37E-04
12	GO:0000502: proteasome complex	2.41E-03
13	GO:0016607: nuclear speck	2.76E-03
14	GO:0005834: heterotrimeric G-protein complex	2.82E-03
15	GO:0005654: nucleoplasm	3.50E-03
16	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	6.38E-03
17	GO:0005634: nucleus	3.26E-02
18	GO:0005730: nucleolus	3.28E-02