co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G11170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0009873: ethylene-activated signaling pathway	1.32E-06
3	GO:0009611: response to wounding	4.44E-05
4	GO:0010029: regulation of seed germination	8.40E-05
5	GO:0009790: embryo development	9.44E-05
6	GO:0006680: glucosylceramide catabolic process	1.00E-04
7	GO:0009609: response to symbiotic bacterium	1.00E-04
8	GO:1901679: nucleotide transmembrane transport	2.36E-04
9	GO:0015786: UDP-glucose transport	2.36E-04
10	GO:0031407: oxylipin metabolic process	2.36E-04
11	GO:0010289: homogalacturonan biosynthetic process	2.36E-04
12	GO:0006898: receptor-mediated endocytosis	2.36E-04
13	GO:0006970: response to osmotic stress	3.01E-04
14	GO:0016045: detection of bacterium	3.92E-04
15	GO:0010359: regulation of anion channel activity	3.92E-04
16	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	3.92E-04
17	GO:0015783: GDP-fucose transport	3.92E-04
18	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	3.92E-04
19	GO:1902448: positive regulation of shade avoidance	3.92E-04
20	GO:0080121: AMP transport	3.92E-04
21	GO:0031408: oxylipin biosynthetic process	3.94E-04
22	GO:0048367: shoot system development	4.43E-04
23	GO:0001944: vasculature development	4.69E-04
24	GO:0072334: UDP-galactose transmembrane transport	5.64E-04
25	GO:0045489: pectin biosynthetic process	6.40E-04
26	GO:0051365: cellular response to potassium ion starvation	7.50E-04
27	GO:0015867: ATP transport	7.50E-04
28	GO:0006665: sphingolipid metabolic process	9.47E-04
29	GO:0032957: inositol trisphosphate metabolic process	9.47E-04
30	GO:0009247: glycolipid biosynthetic process	9.47E-04
31	GO:0009737: response to abscisic acid	1.07E-03
32	GO:0047484: regulation of response to osmotic stress	1.16E-03
33	GO:1900425: negative regulation of defense response to bacterium	1.16E-03
34	GO:0015866: ADP transport	1.16E-03
35	GO:0035435: phosphate ion transmembrane transport	1.16E-03
36	GO:0045926: negative regulation of growth	1.38E-03
37	GO:0098655: cation transmembrane transport	1.38E-03
38	GO:0010555: response to mannitol	1.38E-03
39	GO:1901001: negative regulation of response to salt stress	1.38E-03
40	GO:0006811: ion transport	1.58E-03
41	GO:1902074: response to salt	1.62E-03
42	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.62E-03
43	GO:0006401: RNA catabolic process	1.62E-03
44	GO:0006955: immune response	1.62E-03
45	GO:0019375: galactolipid biosynthetic process	1.87E-03
46	GO:2000070: regulation of response to water deprivation	1.87E-03
47	GO:0007155: cell adhesion	1.87E-03
48	GO:0009827: plant-type cell wall modification	2.14E-03
49	GO:0009657: plastid organization	2.14E-03
50	GO:0051707: response to other organism	2.32E-03
51	GO:0098656: anion transmembrane transport	2.41E-03
52	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.50E-03
53	GO:0010200: response to chitin	2.50E-03
54	GO:2000280: regulation of root development	2.70E-03
55	GO:0042538: hyperosmotic salinity response	2.90E-03
56	GO:0052544: defense response by callose deposition in cell wall	3.31E-03
57	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.63E-03
58	GO:0048364: root development	4.14E-03
59	GO:0048467: gynoecium development	4.30E-03
60	GO:0010020: chloroplast fission	4.30E-03
61	GO:0009414: response to water deprivation	4.56E-03
62	GO:0070588: calcium ion transmembrane transport	4.64E-03
63	GO:0009833: plant-type primary cell wall biogenesis	5.00E-03
64	GO:0009695: jasmonic acid biosynthetic process	5.75E-03
65	GO:0009269: response to desiccation	6.14E-03
66	GO:0006351: transcription, DNA-templated	7.01E-03
67	GO:0048443: stamen development	7.35E-03
68	GO:0009409: response to cold	7.48E-03
69	GO:0010150: leaf senescence	7.61E-03
70	GO:0000271: polysaccharide biosynthetic process	8.21E-03
71	GO:0010154: fruit development	8.65E-03
72	GO:0006470: protein dephosphorylation	8.71E-03
73	GO:0009651: response to salt stress	8.94E-03
74	GO:0000302: response to reactive oxygen species	1.00E-02
75	GO:0010193: response to ozone	1.00E-02
76	GO:0055085: transmembrane transport	1.10E-02
77	GO:0006355: regulation of transcription, DNA-templated	1.14E-02
78	GO:0051607: defense response to virus	1.25E-02
79	GO:0010027: thylakoid membrane organization	1.30E-02
80	GO:0006468: protein phosphorylation	1.33E-02
81	GO:0048481: plant ovule development	1.57E-02
82	GO:0030244: cellulose biosynthetic process	1.57E-02
83	GO:0009834: plant-type secondary cell wall biogenesis	1.68E-02
84	GO:0045892: negative regulation of transcription, DNA-templated	1.78E-02
85	GO:0045087: innate immune response	1.86E-02
86	GO:0016051: carbohydrate biosynthetic process	1.86E-02
87	GO:0071555: cell wall organization	1.99E-02
88	GO:0006839: mitochondrial transport	2.03E-02
89	GO:0032259: methylation	2.08E-02
90	GO:0006952: defense response	2.12E-02
91	GO:0009751: response to salicylic acid	2.14E-02
92	GO:0010114: response to red light	2.22E-02
93	GO:0009753: response to jasmonic acid	2.33E-02
94	GO:0000165: MAPK cascade	2.55E-02
95	GO:0006364: rRNA processing	2.75E-02
96	GO:0009620: response to fungus	3.31E-02
97	GO:0005975: carbohydrate metabolic process	3.34E-02
98	GO:0042545: cell wall modification	3.46E-02
99	GO:0009624: response to nematode	3.53E-02
100	GO:0009742: brassinosteroid mediated signaling pathway	3.68E-02
101	GO:0009738: abscisic acid-activated signaling pathway	3.72E-02
102	GO:0000398: mRNA splicing, via spliceosome	3.91E-02
103	GO:0051301: cell division	4.18E-02
104	GO:0006633: fatty acid biosynthetic process	4.87E-02
105	GO:0007165: signal transduction	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
2	GO:0016629: 12-oxophytodienoate reductase activity	5.31E-07
3	GO:0004348: glucosylceramidase activity	1.00E-04
4	GO:0017040: ceramidase activity	2.36E-04
5	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	2.36E-04
6	GO:0004383: guanylate cyclase activity	3.92E-04
7	GO:0005457: GDP-fucose transmembrane transporter activity	3.92E-04
8	GO:0047325: inositol tetrakisphosphate 1-kinase activity	3.92E-04
9	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	3.92E-04
10	GO:0035250: UDP-galactosyltransferase activity	5.64E-04
11	GO:0003883: CTP synthase activity	5.64E-04
12	GO:0005460: UDP-glucose transmembrane transporter activity	5.64E-04
13	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	5.64E-04
14	GO:0001653: peptide receptor activity	5.64E-04
15	GO:0010181: FMN binding	6.86E-04
16	GO:0009922: fatty acid elongase activity	9.47E-04
17	GO:0005459: UDP-galactose transmembrane transporter activity	9.47E-04
18	GO:0080122: AMP transmembrane transporter activity	9.47E-04
19	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.37E-03
20	GO:0005347: ATP transmembrane transporter activity	1.38E-03
21	GO:0015217: ADP transmembrane transporter activity	1.38E-03
22	GO:0004722: protein serine/threonine phosphatase activity	3.38E-03
23	GO:0005262: calcium channel activity	3.95E-03
24	GO:0015114: phosphate ion transmembrane transporter activity	3.95E-03
25	GO:0000175: 3'-5'-exoribonuclease activity	3.95E-03
26	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.30E-03
27	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	5.00E-03
28	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	5.00E-03
29	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	5.00E-03
30	GO:0005216: ion channel activity	5.75E-03
31	GO:0004540: ribonuclease activity	6.14E-03
32	GO:0004707: MAP kinase activity	6.14E-03
33	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.54E-03
34	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.10E-03
35	GO:0003677: DNA binding	1.03E-02
36	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.16E-02
37	GO:0016413: O-acetyltransferase activity	1.25E-02
38	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.43E-02
39	GO:0005096: GTPase activator activity	1.62E-02
40	GO:0043565: sequence-specific DNA binding	1.85E-02
41	GO:0045330: aspartyl esterase activity	2.95E-02
42	GO:0004842: ubiquitin-protein transferase activity	2.98E-02
43	GO:0004672: protein kinase activity	3.21E-02
44	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.31E-02
45	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.31E-02
46	GO:0030599: pectinesterase activity	3.38E-02
47	GO:0022857: transmembrane transporter activity	3.38E-02
48	GO:0016758: transferase activity, transferring hexosyl groups	4.06E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	2.06E-04
2	GO:0031225: anchored component of membrane	6.87E-04
3	GO:0009526: plastid envelope	7.50E-04
4	GO:0000178: exosome (RNase complex)	9.47E-04
5	GO:0031463: Cul3-RING ubiquitin ligase complex	1.16E-03
6	GO:0016604: nuclear body	2.70E-03
7	GO:0005768: endosome	4.03E-03
8	GO:0005618: cell wall	1.19E-02
9	GO:0000932: P-body	1.30E-02
10	GO:0005802: trans-Golgi network	1.48E-02
11	GO:0005622: intracellular	1.68E-02
12	GO:0005743: mitochondrial inner membrane	2.02E-02
13	GO:0009505: plant-type cell wall	2.64E-02
14	GO:0000139: Golgi membrane	2.90E-02
15	GO:0010008: endosome membrane	3.17E-02
16	GO:0009706: chloroplast inner membrane	3.53E-02