GO Enrichment Analysis of Co-expressed Genes with
AT3G10960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009560: embryo sac egg cell differentiation | 0.00E+00 |
| 2 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.65E-05 |
| 3 | GO:0001709: cell fate determination | 6.61E-05 |
| 4 | GO:0033320: UDP-D-xylose biosynthetic process | 6.61E-05 |
| 5 | GO:0030041: actin filament polymerization | 8.72E-05 |
| 6 | GO:0042732: D-xylose metabolic process | 1.10E-04 |
| 7 | GO:0048317: seed morphogenesis | 1.10E-04 |
| 8 | GO:0006402: mRNA catabolic process | 1.86E-04 |
| 9 | GO:0045010: actin nucleation | 1.86E-04 |
| 10 | GO:0008202: steroid metabolic process | 2.72E-04 |
| 11 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 3.65E-04 |
| 12 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.65E-04 |
| 13 | GO:0006446: regulation of translational initiation | 4.30E-04 |
| 14 | GO:0034605: cellular response to heat | 4.30E-04 |
| 15 | GO:0010143: cutin biosynthetic process | 4.30E-04 |
| 16 | GO:0009225: nucleotide-sugar metabolic process | 4.64E-04 |
| 17 | GO:0009294: DNA mediated transformation | 6.76E-04 |
| 18 | GO:0009686: gibberellin biosynthetic process | 6.76E-04 |
| 19 | GO:0009306: protein secretion | 7.14E-04 |
| 20 | GO:0009960: endosperm development | 8.30E-04 |
| 21 | GO:0031047: gene silencing by RNA | 9.90E-04 |
| 22 | GO:0007267: cell-cell signaling | 1.12E-03 |
| 23 | GO:0016311: dephosphorylation | 1.38E-03 |
| 24 | GO:0009553: embryo sac development | 3.00E-03 |
| 25 | GO:0000398: mRNA splicing, via spliceosome | 3.37E-03 |
| 26 | GO:0009845: seed germination | 3.76E-03 |
| 27 | GO:0006413: translational initiation | 4.23E-03 |
| 28 | GO:0009723: response to ethylene | 6.61E-03 |
| 29 | GO:0006886: intracellular protein transport | 8.04E-03 |
| 30 | GO:0006869: lipid transport | 8.39E-03 |
| 31 | GO:0006397: mRNA processing | 9.38E-03 |
| 32 | GO:0009873: ethylene-activated signaling pathway | 1.09E-02 |
| 33 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.70E-02 |
| 34 | GO:0046686: response to cadmium ion | 3.10E-02 |
| 35 | GO:0007165: signal transduction | 3.81E-02 |
| 36 | GO:0016567: protein ubiquitination | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030621: U4 snRNA binding | 0.00E+00 |
| 2 | GO:0017070: U6 snRNA binding | 8.72E-05 |
| 3 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.10E-04 |
| 4 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.10E-04 |
| 5 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.10E-04 |
| 6 | GO:0070403: NAD+ binding | 1.34E-04 |
| 7 | GO:0008142: oxysterol binding | 2.14E-04 |
| 8 | GO:0008536: Ran GTPase binding | 8.30E-04 |
| 9 | GO:0004518: nuclease activity | 9.90E-04 |
| 10 | GO:0016791: phosphatase activity | 1.07E-03 |
| 11 | GO:0035091: phosphatidylinositol binding | 2.08E-03 |
| 12 | GO:0003779: actin binding | 3.00E-03 |
| 13 | GO:0016746: transferase activity, transferring acyl groups | 3.12E-03 |
| 14 | GO:0003729: mRNA binding | 3.38E-03 |
| 15 | GO:0008565: protein transporter activity | 4.02E-03 |
| 16 | GO:0003743: translation initiation factor activity | 4.93E-03 |
| 17 | GO:0008289: lipid binding | 1.15E-02 |
| 18 | GO:0000166: nucleotide binding | 1.37E-02 |
| 19 | GO:0030246: carbohydrate binding | 1.69E-02 |
| 20 | GO:0005516: calmodulin binding | 1.82E-02 |
| 21 | GO:0005525: GTP binding | 1.94E-02 |
| 22 | GO:0003824: catalytic activity | 2.41E-02 |
| 23 | GO:0016301: kinase activity | 3.82E-02 |
| 24 | GO:0003677: DNA binding | 4.09E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016442: RISC complex | 6.06E-06 |
| 2 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 2.14E-04 |
| 3 | GO:0010494: cytoplasmic stress granule | 2.43E-04 |
| 4 | GO:0048471: perinuclear region of cytoplasm | 3.33E-04 |
| 5 | GO:0032580: Golgi cisterna membrane | 1.07E-03 |
| 6 | GO:0000932: P-body | 1.20E-03 |
| 7 | GO:0005643: nuclear pore | 1.43E-03 |
| 8 | GO:0019005: SCF ubiquitin ligase complex | 1.43E-03 |
| 9 | GO:0005635: nuclear envelope | 2.52E-03 |
| 10 | GO:0005681: spliceosomal complex | 2.70E-03 |
| 11 | GO:0016607: nuclear speck | 2.76E-03 |
| 12 | GO:0009524: phragmoplast | 3.69E-03 |
| 13 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 6.38E-03 |
| 14 | GO:0005886: plasma membrane | 1.01E-02 |
| 15 | GO:0005634: nucleus | 1.19E-02 |
| 16 | GO:0005802: trans-Golgi network | 1.91E-02 |
| 17 | GO:0005768: endosome | 2.09E-02 |
| 18 | GO:0009506: plasmodesma | 3.01E-02 |
| 19 | GO:0016020: membrane | 3.27E-02 |