GO Enrichment Analysis of Co-expressed Genes with
AT3G10850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 2 | GO:0010477: response to sulfur dioxide | 0.00E+00 |
| 3 | GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine | 0.00E+00 |
| 4 | GO:0009661: chromoplast organization | 0.00E+00 |
| 5 | GO:0098586: cellular response to virus | 0.00E+00 |
| 6 | GO:0009658: chloroplast organization | 4.96E-06 |
| 7 | GO:0010190: cytochrome b6f complex assembly | 1.00E-05 |
| 8 | GO:0071266: 'de novo' L-methionine biosynthetic process | 6.10E-05 |
| 9 | GO:0019346: transsulfuration | 6.10E-05 |
| 10 | GO:0019343: cysteine biosynthetic process via cystathionine | 6.10E-05 |
| 11 | GO:0071461: cellular response to redox state | 6.10E-05 |
| 12 | GO:0010362: negative regulation of anion channel activity by blue light | 6.10E-05 |
| 13 | GO:0080005: photosystem stoichiometry adjustment | 1.48E-04 |
| 14 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.48E-04 |
| 15 | GO:0046741: transport of virus in host, tissue to tissue | 1.48E-04 |
| 16 | GO:0006013: mannose metabolic process | 2.51E-04 |
| 17 | GO:0071836: nectar secretion | 2.51E-04 |
| 18 | GO:0006696: ergosterol biosynthetic process | 2.51E-04 |
| 19 | GO:0043572: plastid fission | 3.65E-04 |
| 20 | GO:2001141: regulation of RNA biosynthetic process | 3.65E-04 |
| 21 | GO:0046653: tetrahydrofolate metabolic process | 3.65E-04 |
| 22 | GO:0009902: chloroplast relocation | 4.88E-04 |
| 23 | GO:0015994: chlorophyll metabolic process | 4.88E-04 |
| 24 | GO:0016120: carotene biosynthetic process | 6.19E-04 |
| 25 | GO:0006555: methionine metabolic process | 7.57E-04 |
| 26 | GO:0010189: vitamin E biosynthetic process | 9.01E-04 |
| 27 | GO:0019509: L-methionine salvage from methylthioadenosine | 9.01E-04 |
| 28 | GO:0009853: photorespiration | 9.58E-04 |
| 29 | GO:0055114: oxidation-reduction process | 1.00E-03 |
| 30 | GO:0009396: folic acid-containing compound biosynthetic process | 1.05E-03 |
| 31 | GO:0010038: response to metal ion | 1.05E-03 |
| 32 | GO:0050821: protein stabilization | 1.21E-03 |
| 33 | GO:0006102: isocitrate metabolic process | 1.21E-03 |
| 34 | GO:0048564: photosystem I assembly | 1.21E-03 |
| 35 | GO:0044030: regulation of DNA methylation | 1.38E-03 |
| 36 | GO:0071482: cellular response to light stimulus | 1.38E-03 |
| 37 | GO:0034765: regulation of ion transmembrane transport | 1.55E-03 |
| 38 | GO:0009638: phototropism | 1.73E-03 |
| 39 | GO:0035999: tetrahydrofolate interconversion | 1.73E-03 |
| 40 | GO:0045036: protein targeting to chloroplast | 1.92E-03 |
| 41 | GO:0006259: DNA metabolic process | 1.92E-03 |
| 42 | GO:0006265: DNA topological change | 2.12E-03 |
| 43 | GO:0006352: DNA-templated transcription, initiation | 2.12E-03 |
| 44 | GO:0016485: protein processing | 2.12E-03 |
| 45 | GO:0006790: sulfur compound metabolic process | 2.32E-03 |
| 46 | GO:0009767: photosynthetic electron transport chain | 2.52E-03 |
| 47 | GO:0005986: sucrose biosynthetic process | 2.52E-03 |
| 48 | GO:0010020: chloroplast fission | 2.74E-03 |
| 49 | GO:0010207: photosystem II assembly | 2.74E-03 |
| 50 | GO:0051302: regulation of cell division | 3.65E-03 |
| 51 | GO:0016575: histone deacetylation | 3.65E-03 |
| 52 | GO:0006730: one-carbon metabolic process | 4.15E-03 |
| 53 | GO:0016226: iron-sulfur cluster assembly | 4.15E-03 |
| 54 | GO:0006817: phosphate ion transport | 4.65E-03 |
| 55 | GO:0016117: carotenoid biosynthetic process | 4.92E-03 |
| 56 | GO:0042391: regulation of membrane potential | 5.19E-03 |
| 57 | GO:0010118: stomatal movement | 5.19E-03 |
| 58 | GO:0006662: glycerol ether metabolic process | 5.46E-03 |
| 59 | GO:0006814: sodium ion transport | 5.74E-03 |
| 60 | GO:0007059: chromosome segregation | 5.74E-03 |
| 61 | GO:0009791: post-embryonic development | 6.03E-03 |
| 62 | GO:0000302: response to reactive oxygen species | 6.32E-03 |
| 63 | GO:0030163: protein catabolic process | 6.91E-03 |
| 64 | GO:0071805: potassium ion transmembrane transport | 7.52E-03 |
| 65 | GO:0009816: defense response to bacterium, incompatible interaction | 8.48E-03 |
| 66 | GO:0042128: nitrate assimilation | 8.81E-03 |
| 67 | GO:0015995: chlorophyll biosynthetic process | 9.14E-03 |
| 68 | GO:0006508: proteolysis | 9.35E-03 |
| 69 | GO:0018298: protein-chromophore linkage | 9.82E-03 |
| 70 | GO:0000160: phosphorelay signal transduction system | 1.02E-02 |
| 71 | GO:0006811: ion transport | 1.05E-02 |
| 72 | GO:0010043: response to zinc ion | 1.09E-02 |
| 73 | GO:0007568: aging | 1.09E-02 |
| 74 | GO:0009637: response to blue light | 1.16E-02 |
| 75 | GO:0034599: cellular response to oxidative stress | 1.20E-02 |
| 76 | GO:0006099: tricarboxylic acid cycle | 1.20E-02 |
| 77 | GO:0009636: response to toxic substance | 1.51E-02 |
| 78 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.76E-02 |
| 79 | GO:0009735: response to cytokinin | 1.81E-02 |
| 80 | GO:0007623: circadian rhythm | 3.25E-02 |
| 81 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.36E-02 |
| 82 | GO:0007049: cell cycle | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 2 | GO:0008482: sulfite oxidase activity | 0.00E+00 |
| 3 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 4 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 5 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0004180: carboxypeptidase activity | 8.32E-07 |
| 7 | GO:0004121: cystathionine beta-lyase activity | 6.10E-05 |
| 8 | GO:0051996: squalene synthase activity | 6.10E-05 |
| 9 | GO:0016783: sulfurtransferase activity | 6.10E-05 |
| 10 | GO:0030941: chloroplast targeting sequence binding | 6.10E-05 |
| 11 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 6.10E-05 |
| 12 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 6.10E-05 |
| 13 | GO:0004123: cystathionine gamma-lyase activity | 6.10E-05 |
| 14 | GO:0016491: oxidoreductase activity | 8.94E-05 |
| 15 | GO:0004046: aminoacylase activity | 1.48E-04 |
| 16 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.48E-04 |
| 17 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.48E-04 |
| 18 | GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity | 1.48E-04 |
| 19 | GO:0004477: methenyltetrahydrofolate cyclohydrolase activity | 1.48E-04 |
| 20 | GO:0003913: DNA photolyase activity | 2.51E-04 |
| 21 | GO:0032947: protein complex scaffold | 2.51E-04 |
| 22 | GO:0003962: cystathionine gamma-synthase activity | 2.51E-04 |
| 23 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.51E-04 |
| 24 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 2.51E-04 |
| 25 | GO:0046524: sucrose-phosphate synthase activity | 2.51E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 3.65E-04 |
| 27 | GO:0004792: thiosulfate sulfurtransferase activity | 3.65E-04 |
| 28 | GO:0009882: blue light photoreceptor activity | 3.65E-04 |
| 29 | GO:0001053: plastid sigma factor activity | 4.88E-04 |
| 30 | GO:0051861: glycolipid binding | 4.88E-04 |
| 31 | GO:0016987: sigma factor activity | 4.88E-04 |
| 32 | GO:0030151: molybdenum ion binding | 6.19E-04 |
| 33 | GO:0008236: serine-type peptidase activity | 7.29E-04 |
| 34 | GO:0000293: ferric-chelate reductase activity | 7.57E-04 |
| 35 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 7.57E-04 |
| 36 | GO:0004559: alpha-mannosidase activity | 9.01E-04 |
| 37 | GO:0016157: sucrose synthase activity | 9.01E-04 |
| 38 | GO:0005242: inward rectifier potassium channel activity | 9.01E-04 |
| 39 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.38E-03 |
| 40 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.38E-03 |
| 41 | GO:0071949: FAD binding | 1.55E-03 |
| 42 | GO:0015386: potassium:proton antiporter activity | 2.12E-03 |
| 43 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.52E-03 |
| 44 | GO:0031072: heat shock protein binding | 2.52E-03 |
| 45 | GO:0000155: phosphorelay sensor kinase activity | 2.52E-03 |
| 46 | GO:0051536: iron-sulfur cluster binding | 3.42E-03 |
| 47 | GO:0004407: histone deacetylase activity | 3.42E-03 |
| 48 | GO:0047134: protein-disulfide reductase activity | 4.92E-03 |
| 49 | GO:0042802: identical protein binding | 4.99E-03 |
| 50 | GO:0030551: cyclic nucleotide binding | 5.19E-03 |
| 51 | GO:0005249: voltage-gated potassium channel activity | 5.19E-03 |
| 52 | GO:0008080: N-acetyltransferase activity | 5.46E-03 |
| 53 | GO:0010181: FMN binding | 5.74E-03 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 5.74E-03 |
| 55 | GO:0048038: quinone binding | 6.32E-03 |
| 56 | GO:0015385: sodium:proton antiporter activity | 6.91E-03 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.91E-03 |
| 58 | GO:0004364: glutathione transferase activity | 1.35E-02 |
| 59 | GO:0004185: serine-type carboxypeptidase activity | 1.39E-02 |
| 60 | GO:0005198: structural molecule activity | 1.51E-02 |
| 61 | GO:0015293: symporter activity | 1.51E-02 |
| 62 | GO:0051287: NAD binding | 1.59E-02 |
| 63 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.71E-02 |
| 64 | GO:0016887: ATPase activity | 1.73E-02 |
| 65 | GO:0051082: unfolded protein binding | 2.20E-02 |
| 66 | GO:0016746: transferase activity, transferring acyl groups | 2.25E-02 |
| 67 | GO:0015035: protein disulfide oxidoreductase activity | 2.25E-02 |
| 68 | GO:0016829: lyase activity | 2.73E-02 |
| 69 | GO:0030170: pyridoxal phosphate binding | 2.78E-02 |
| 70 | GO:0015297: antiporter activity | 3.14E-02 |
| 71 | GO:0005506: iron ion binding | 3.93E-02 |
| 72 | GO:0000287: magnesium ion binding | 4.37E-02 |
| 73 | GO:0003824: catalytic activity | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.09E-16 |
| 2 | GO:0031972: chloroplast intermembrane space | 6.10E-05 |
| 3 | GO:0031969: chloroplast membrane | 1.24E-04 |
| 4 | GO:0010007: magnesium chelatase complex | 2.51E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 2.99E-04 |
| 6 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 4.88E-04 |
| 7 | GO:0009707: chloroplast outer membrane | 7.65E-04 |
| 8 | GO:0031359: integral component of chloroplast outer membrane | 1.05E-03 |
| 9 | GO:0031966: mitochondrial membrane | 1.52E-03 |
| 10 | GO:0009706: chloroplast inner membrane | 2.29E-03 |
| 11 | GO:0009570: chloroplast stroma | 2.56E-03 |
| 12 | GO:0010287: plastoglobule | 2.71E-03 |
| 13 | GO:0045271: respiratory chain complex I | 3.65E-03 |
| 14 | GO:0009532: plastid stroma | 3.89E-03 |
| 15 | GO:0009295: nucleoid | 7.52E-03 |
| 16 | GO:0009505: plant-type cell wall | 1.13E-02 |
| 17 | GO:0031977: thylakoid lumen | 1.31E-02 |
| 18 | GO:0005747: mitochondrial respiratory chain complex I | 1.97E-02 |
| 19 | GO:0005773: vacuole | 2.13E-02 |
| 20 | GO:0005777: peroxisome | 2.27E-02 |
| 21 | GO:0009534: chloroplast thylakoid | 2.39E-02 |
| 22 | GO:0009536: plastid | 4.88E-02 |