GO Enrichment Analysis of Co-expressed Genes with
AT3G10610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031120: snRNA pseudouridine synthesis | 0.00E+00 |
| 2 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:0031118: rRNA pseudouridine synthesis | 0.00E+00 |
| 4 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 5 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 6 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 7 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 8 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 9 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 10 | GO:0051050: positive regulation of transport | 0.00E+00 |
| 11 | GO:0006412: translation | 1.35E-66 |
| 12 | GO:0042254: ribosome biogenesis | 8.70E-25 |
| 13 | GO:0006364: rRNA processing | 2.05E-14 |
| 14 | GO:0006626: protein targeting to mitochondrion | 8.08E-09 |
| 15 | GO:0048569: post-embryonic animal organ development | 2.61E-06 |
| 16 | GO:0010162: seed dormancy process | 1.58E-05 |
| 17 | GO:0042274: ribosomal small subunit biogenesis | 3.91E-05 |
| 18 | GO:0042273: ribosomal large subunit biogenesis | 3.91E-05 |
| 19 | GO:0000027: ribosomal large subunit assembly | 6.57E-05 |
| 20 | GO:0000470: maturation of LSU-rRNA | 9.17E-05 |
| 21 | GO:0007005: mitochondrion organization | 1.02E-04 |
| 22 | GO:0010197: polar nucleus fusion | 1.84E-04 |
| 23 | GO:0000028: ribosomal small subunit assembly | 2.12E-04 |
| 24 | GO:0006169: adenosine salvage | 2.36E-04 |
| 25 | GO:0006407: rRNA export from nucleus | 2.36E-04 |
| 26 | GO:0000469: cleavage involved in rRNA processing | 2.36E-04 |
| 27 | GO:0035266: meristem growth | 2.36E-04 |
| 28 | GO:0030490: maturation of SSU-rRNA | 2.36E-04 |
| 29 | GO:0000494: box C/D snoRNA 3'-end processing | 2.36E-04 |
| 30 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.36E-04 |
| 31 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.36E-04 |
| 32 | GO:0019877: diaminopimelate biosynthetic process | 2.36E-04 |
| 33 | GO:0043985: histone H4-R3 methylation | 2.36E-04 |
| 34 | GO:1990258: histone glutamine methylation | 2.36E-04 |
| 35 | GO:0009553: embryo sac development | 3.55E-04 |
| 36 | GO:0045041: protein import into mitochondrial intermembrane space | 5.24E-04 |
| 37 | GO:0009967: positive regulation of signal transduction | 5.24E-04 |
| 38 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 5.24E-04 |
| 39 | GO:0009735: response to cytokinin | 5.40E-04 |
| 40 | GO:0045039: protein import into mitochondrial inner membrane | 8.52E-04 |
| 41 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.02E-03 |
| 42 | GO:0030150: protein import into mitochondrial matrix | 1.02E-03 |
| 43 | GO:0007004: telomere maintenance via telomerase | 1.21E-03 |
| 44 | GO:0009855: determination of bilateral symmetry | 1.21E-03 |
| 45 | GO:0051131: chaperone-mediated protein complex assembly | 1.21E-03 |
| 46 | GO:0009294: DNA mediated transformation | 1.47E-03 |
| 47 | GO:0000460: maturation of 5.8S rRNA | 1.62E-03 |
| 48 | GO:0006479: protein methylation | 1.62E-03 |
| 49 | GO:0044209: AMP salvage | 2.07E-03 |
| 50 | GO:0031167: rRNA methylation | 2.07E-03 |
| 51 | GO:0016554: cytidine to uridine editing | 2.55E-03 |
| 52 | GO:0000741: karyogamy | 2.55E-03 |
| 53 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.06E-03 |
| 54 | GO:0006458: 'de novo' protein folding | 3.06E-03 |
| 55 | GO:0016444: somatic cell DNA recombination | 3.06E-03 |
| 56 | GO:0009955: adaxial/abaxial pattern specification | 3.06E-03 |
| 57 | GO:0042026: protein refolding | 3.06E-03 |
| 58 | GO:0080186: developmental vegetative growth | 3.61E-03 |
| 59 | GO:0001522: pseudouridine synthesis | 4.19E-03 |
| 60 | GO:0006413: translational initiation | 4.36E-03 |
| 61 | GO:0001558: regulation of cell growth | 4.79E-03 |
| 62 | GO:0001510: RNA methylation | 4.79E-03 |
| 63 | GO:0010311: lateral root formation | 4.87E-03 |
| 64 | GO:0007338: single fertilization | 5.43E-03 |
| 65 | GO:0010449: root meristem growth | 6.09E-03 |
| 66 | GO:0030422: production of siRNA involved in RNA interference | 6.78E-03 |
| 67 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.50E-03 |
| 68 | GO:0006820: anion transport | 8.25E-03 |
| 69 | GO:2000012: regulation of auxin polar transport | 9.02E-03 |
| 70 | GO:0010030: positive regulation of seed germination | 1.06E-02 |
| 71 | GO:0010073: meristem maintenance | 1.32E-02 |
| 72 | GO:0051302: regulation of cell division | 1.32E-02 |
| 73 | GO:0015031: protein transport | 1.34E-02 |
| 74 | GO:0016569: covalent chromatin modification | 1.37E-02 |
| 75 | GO:0006334: nucleosome assembly | 1.42E-02 |
| 76 | GO:0061077: chaperone-mediated protein folding | 1.42E-02 |
| 77 | GO:0040007: growth | 1.61E-02 |
| 78 | GO:0071215: cellular response to abscisic acid stimulus | 1.61E-02 |
| 79 | GO:0009561: megagametogenesis | 1.70E-02 |
| 80 | GO:0008033: tRNA processing | 1.91E-02 |
| 81 | GO:0010501: RNA secondary structure unwinding | 1.91E-02 |
| 82 | GO:0000413: protein peptidyl-prolyl isomerization | 1.91E-02 |
| 83 | GO:0009960: endosperm development | 2.01E-02 |
| 84 | GO:0010305: leaf vascular tissue pattern formation | 2.01E-02 |
| 85 | GO:0080156: mitochondrial mRNA modification | 2.34E-02 |
| 86 | GO:0016032: viral process | 2.45E-02 |
| 87 | GO:0032502: developmental process | 2.45E-02 |
| 88 | GO:0009567: double fertilization forming a zygote and endosperm | 2.68E-02 |
| 89 | GO:0016049: cell growth | 3.54E-02 |
| 90 | GO:0006811: ion transport | 3.93E-02 |
| 91 | GO:0048527: lateral root development | 4.07E-02 |
| 92 | GO:0000724: double-strand break repair via homologous recombination | 4.20E-02 |
| 93 | GO:0006099: tricarboxylic acid cycle | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 2 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 1.06E-79 |
| 4 | GO:0003723: RNA binding | 3.11E-13 |
| 5 | GO:0019843: rRNA binding | 5.39E-10 |
| 6 | GO:0003729: mRNA binding | 8.79E-10 |
| 7 | GO:0030515: snoRNA binding | 2.10E-08 |
| 8 | GO:0000166: nucleotide binding | 2.63E-06 |
| 9 | GO:0044183: protein binding involved in protein folding | 2.04E-05 |
| 10 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.00E-05 |
| 11 | GO:0004407: histone deacetylase activity | 6.57E-05 |
| 12 | GO:0048037: cofactor binding | 2.36E-04 |
| 13 | GO:1990259: histone-glutamine methyltransferase activity | 2.36E-04 |
| 14 | GO:0042134: rRNA primary transcript binding | 2.36E-04 |
| 15 | GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase | 2.36E-04 |
| 16 | GO:0004001: adenosine kinase activity | 2.36E-04 |
| 17 | GO:0008026: ATP-dependent helicase activity | 4.09E-04 |
| 18 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 5.24E-04 |
| 19 | GO:0043021: ribonucleoprotein complex binding | 5.24E-04 |
| 20 | GO:0070034: telomerase RNA binding | 5.24E-04 |
| 21 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 5.24E-04 |
| 22 | GO:0005078: MAP-kinase scaffold activity | 5.24E-04 |
| 23 | GO:0050897: cobalt ion binding | 6.81E-04 |
| 24 | GO:0008649: rRNA methyltransferase activity | 8.52E-04 |
| 25 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 8.52E-04 |
| 26 | GO:0070181: small ribosomal subunit rRNA binding | 8.52E-04 |
| 27 | GO:0008235: metalloexopeptidase activity | 3.61E-03 |
| 28 | GO:0015288: porin activity | 4.19E-03 |
| 29 | GO:0008135: translation factor activity, RNA binding | 4.79E-03 |
| 30 | GO:0008308: voltage-gated anion channel activity | 4.79E-03 |
| 31 | GO:0003746: translation elongation factor activity | 5.87E-03 |
| 32 | GO:0001055: RNA polymerase II activity | 6.09E-03 |
| 33 | GO:0001054: RNA polymerase I activity | 7.50E-03 |
| 34 | GO:0001056: RNA polymerase III activity | 8.25E-03 |
| 35 | GO:0000049: tRNA binding | 8.25E-03 |
| 36 | GO:0009982: pseudouridine synthase activity | 9.02E-03 |
| 37 | GO:0015266: protein channel activity | 9.02E-03 |
| 38 | GO:0051087: chaperone binding | 1.32E-02 |
| 39 | GO:0051082: unfolded protein binding | 1.46E-02 |
| 40 | GO:0005507: copper ion binding | 1.71E-02 |
| 41 | GO:0003924: GTPase activity | 1.79E-02 |
| 42 | GO:0003743: translation initiation factor activity | 2.95E-02 |
| 43 | GO:0004004: ATP-dependent RNA helicase activity | 3.41E-02 |
| 44 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 4.48E-02 |
| 45 | GO:0042393: histone binding | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 4 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 1.58E-50 |
| 6 | GO:0005840: ribosome | 3.95E-47 |
| 7 | GO:0022626: cytosolic ribosome | 1.30E-43 |
| 8 | GO:0005730: nucleolus | 5.90E-43 |
| 9 | GO:0022627: cytosolic small ribosomal subunit | 1.86E-34 |
| 10 | GO:0009506: plasmodesma | 3.10E-14 |
| 11 | GO:0005829: cytosol | 1.51E-13 |
| 12 | GO:0005737: cytoplasm | 2.76E-11 |
| 13 | GO:0032040: small-subunit processome | 4.72E-11 |
| 14 | GO:0015934: large ribosomal subunit | 7.90E-11 |
| 15 | GO:0015935: small ribosomal subunit | 5.55E-08 |
| 16 | GO:0005774: vacuolar membrane | 7.89E-06 |
| 17 | GO:0015030: Cajal body | 1.20E-05 |
| 18 | GO:0031429: box H/ACA snoRNP complex | 2.15E-05 |
| 19 | GO:0005834: heterotrimeric G-protein complex | 3.10E-05 |
| 20 | GO:0005773: vacuole | 5.87E-05 |
| 21 | GO:0005758: mitochondrial intermembrane space | 6.57E-05 |
| 22 | GO:0031428: box C/D snoRNP complex | 9.17E-05 |
| 23 | GO:0016020: membrane | 1.55E-04 |
| 24 | GO:0030687: preribosome, large subunit precursor | 1.67E-04 |
| 25 | GO:0030686: 90S preribosome | 2.36E-04 |
| 26 | GO:0005742: mitochondrial outer membrane translocase complex | 2.63E-04 |
| 27 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.80E-04 |
| 28 | GO:0070545: PeBoW complex | 5.24E-04 |
| 29 | GO:0005618: cell wall | 7.26E-04 |
| 30 | GO:0005743: mitochondrial inner membrane | 8.34E-04 |
| 31 | GO:0005747: mitochondrial respiratory chain complex I | 1.96E-03 |
| 32 | GO:0016272: prefoldin complex | 3.06E-03 |
| 33 | GO:0016363: nuclear matrix | 3.06E-03 |
| 34 | GO:0034399: nuclear periphery | 4.19E-03 |
| 35 | GO:0005759: mitochondrial matrix | 4.23E-03 |
| 36 | GO:0046930: pore complex | 4.79E-03 |
| 37 | GO:0005736: DNA-directed RNA polymerase I complex | 5.43E-03 |
| 38 | GO:0005666: DNA-directed RNA polymerase III complex | 6.09E-03 |
| 39 | GO:0000418: DNA-directed RNA polymerase IV complex | 6.78E-03 |
| 40 | GO:0005622: intracellular | 7.06E-03 |
| 41 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.50E-03 |
| 42 | GO:0009507: chloroplast | 7.63E-03 |
| 43 | GO:0005665: DNA-directed RNA polymerase II, core complex | 8.25E-03 |
| 44 | GO:0019013: viral nucleocapsid | 9.02E-03 |
| 45 | GO:0000419: DNA-directed RNA polymerase V complex | 1.15E-02 |
| 46 | GO:0005741: mitochondrial outer membrane | 1.42E-02 |
| 47 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.70E-02 |
| 48 | GO:0016592: mediator complex | 2.45E-02 |
| 49 | GO:0030529: intracellular ribonucleoprotein complex | 3.04E-02 |