GO Enrichment Analysis of Co-expressed Genes with
AT3G09050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 2 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 3 | GO:0042493: response to drug | 0.00E+00 |
| 4 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.39E-06 |
| 6 | GO:0042371: vitamin K biosynthetic process | 1.48E-04 |
| 7 | GO:0071454: cellular response to anoxia | 1.48E-04 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 2.65E-04 |
| 9 | GO:0009451: RNA modification | 3.22E-04 |
| 10 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 3.38E-04 |
| 11 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.38E-04 |
| 12 | GO:0009650: UV protection | 7.93E-04 |
| 13 | GO:0090307: mitotic spindle assembly | 7.93E-04 |
| 14 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 7.93E-04 |
| 15 | GO:0031122: cytoplasmic microtubule organization | 1.05E-03 |
| 16 | GO:0071483: cellular response to blue light | 1.05E-03 |
| 17 | GO:0042274: ribosomal small subunit biogenesis | 1.05E-03 |
| 18 | GO:0009793: embryo development ending in seed dormancy | 1.06E-03 |
| 19 | GO:0016123: xanthophyll biosynthetic process | 1.33E-03 |
| 20 | GO:0006810: transport | 1.47E-03 |
| 21 | GO:0005975: carbohydrate metabolic process | 1.57E-03 |
| 22 | GO:0010190: cytochrome b6f complex assembly | 1.63E-03 |
| 23 | GO:0032973: amino acid export | 1.63E-03 |
| 24 | GO:0017148: negative regulation of translation | 1.96E-03 |
| 25 | GO:0010189: vitamin E biosynthetic process | 1.96E-03 |
| 26 | GO:0010044: response to aluminum ion | 2.30E-03 |
| 27 | GO:0009772: photosynthetic electron transport in photosystem II | 2.30E-03 |
| 28 | GO:0043090: amino acid import | 2.30E-03 |
| 29 | GO:0006605: protein targeting | 2.66E-03 |
| 30 | GO:0048564: photosystem I assembly | 2.66E-03 |
| 31 | GO:0042255: ribosome assembly | 2.66E-03 |
| 32 | GO:0006353: DNA-templated transcription, termination | 2.66E-03 |
| 33 | GO:0071482: cellular response to light stimulus | 3.04E-03 |
| 34 | GO:0080144: amino acid homeostasis | 3.44E-03 |
| 35 | GO:0000373: Group II intron splicing | 3.44E-03 |
| 36 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.44E-03 |
| 37 | GO:0006098: pentose-phosphate shunt | 3.44E-03 |
| 38 | GO:0009098: leucine biosynthetic process | 3.86E-03 |
| 39 | GO:0009744: response to sucrose | 3.90E-03 |
| 40 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 4.29E-03 |
| 41 | GO:0006949: syncytium formation | 4.29E-03 |
| 42 | GO:0080167: response to karrikin | 4.68E-03 |
| 43 | GO:0006352: DNA-templated transcription, initiation | 4.73E-03 |
| 44 | GO:0045037: protein import into chloroplast stroma | 5.20E-03 |
| 45 | GO:0010628: positive regulation of gene expression | 5.68E-03 |
| 46 | GO:0006006: glucose metabolic process | 5.68E-03 |
| 47 | GO:0009725: response to hormone | 5.68E-03 |
| 48 | GO:0006094: gluconeogenesis | 5.68E-03 |
| 49 | GO:0009767: photosynthetic electron transport chain | 5.68E-03 |
| 50 | GO:0055114: oxidation-reduction process | 5.99E-03 |
| 51 | GO:0010207: photosystem II assembly | 6.17E-03 |
| 52 | GO:0034605: cellular response to heat | 6.17E-03 |
| 53 | GO:0019253: reductive pentose-phosphate cycle | 6.17E-03 |
| 54 | GO:0090351: seedling development | 6.67E-03 |
| 55 | GO:0006863: purine nucleobase transport | 7.20E-03 |
| 56 | GO:0007017: microtubule-based process | 8.29E-03 |
| 57 | GO:0080092: regulation of pollen tube growth | 9.43E-03 |
| 58 | GO:0009411: response to UV | 1.00E-02 |
| 59 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.00E-02 |
| 60 | GO:0009306: protein secretion | 1.06E-02 |
| 61 | GO:0070417: cellular response to cold | 1.13E-02 |
| 62 | GO:0008033: tRNA processing | 1.19E-02 |
| 63 | GO:0048868: pollen tube development | 1.25E-02 |
| 64 | GO:0015986: ATP synthesis coupled proton transport | 1.32E-02 |
| 65 | GO:0007018: microtubule-based movement | 1.32E-02 |
| 66 | GO:0006814: sodium ion transport | 1.32E-02 |
| 67 | GO:0008654: phospholipid biosynthetic process | 1.39E-02 |
| 68 | GO:0010193: response to ozone | 1.45E-02 |
| 69 | GO:0016032: viral process | 1.52E-02 |
| 70 | GO:0032502: developmental process | 1.52E-02 |
| 71 | GO:0009828: plant-type cell wall loosening | 1.67E-02 |
| 72 | GO:0001666: response to hypoxia | 1.89E-02 |
| 73 | GO:0010027: thylakoid membrane organization | 1.89E-02 |
| 74 | GO:0009658: chloroplast organization | 2.01E-02 |
| 75 | GO:0009817: defense response to fungus, incompatible interaction | 2.28E-02 |
| 76 | GO:0009664: plant-type cell wall organization | 3.80E-02 |
| 77 | GO:0010224: response to UV-B | 4.10E-02 |
| 78 | GO:0006096: glycolytic process | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.75E-05 |
| 4 | GO:0016491: oxidoreductase activity | 5.92E-05 |
| 5 | GO:0048038: quinone binding | 9.67E-05 |
| 6 | GO:0015075: ion transmembrane transporter activity | 1.48E-04 |
| 7 | GO:0047911: galacturan 1,4-alpha-galacturonidase activity | 1.48E-04 |
| 8 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 3.38E-04 |
| 9 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.92E-04 |
| 10 | GO:0043023: ribosomal large subunit binding | 7.93E-04 |
| 11 | GO:0008508: bile acid:sodium symporter activity | 7.93E-04 |
| 12 | GO:0001053: plastid sigma factor activity | 1.05E-03 |
| 13 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.05E-03 |
| 14 | GO:0016987: sigma factor activity | 1.05E-03 |
| 15 | GO:0043015: gamma-tubulin binding | 1.05E-03 |
| 16 | GO:0051011: microtubule minus-end binding | 1.33E-03 |
| 17 | GO:0004462: lactoylglutathione lyase activity | 1.63E-03 |
| 18 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.63E-03 |
| 19 | GO:0004332: fructose-bisphosphate aldolase activity | 1.63E-03 |
| 20 | GO:0042578: phosphoric ester hydrolase activity | 1.63E-03 |
| 21 | GO:0004519: endonuclease activity | 1.72E-03 |
| 22 | GO:0008195: phosphatidate phosphatase activity | 1.96E-03 |
| 23 | GO:0015631: tubulin binding | 1.96E-03 |
| 24 | GO:0019899: enzyme binding | 2.30E-03 |
| 25 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.73E-03 |
| 26 | GO:0008327: methyl-CpG binding | 4.73E-03 |
| 27 | GO:0003690: double-stranded DNA binding | 5.43E-03 |
| 28 | GO:0003777: microtubule motor activity | 5.81E-03 |
| 29 | GO:0008146: sulfotransferase activity | 6.67E-03 |
| 30 | GO:0005345: purine nucleobase transmembrane transporter activity | 8.29E-03 |
| 31 | GO:0019843: rRNA binding | 9.35E-03 |
| 32 | GO:0003727: single-stranded RNA binding | 1.06E-02 |
| 33 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.25E-02 |
| 34 | GO:0010181: FMN binding | 1.32E-02 |
| 35 | GO:0004872: receptor activity | 1.39E-02 |
| 36 | GO:0003723: RNA binding | 1.47E-02 |
| 37 | GO:0005200: structural constituent of cytoskeleton | 1.74E-02 |
| 38 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.28E-02 |
| 39 | GO:0003993: acid phosphatase activity | 2.79E-02 |
| 40 | GO:0050661: NADP binding | 2.96E-02 |
| 41 | GO:0043621: protein self-association | 3.42E-02 |
| 42 | GO:0051287: NAD binding | 3.71E-02 |
| 43 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.00E-02 |
| 44 | GO:0015171: amino acid transmembrane transporter activity | 4.30E-02 |
| 45 | GO:0031625: ubiquitin protein ligase binding | 4.30E-02 |
| 46 | GO:0004650: polygalacturonase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.62E-17 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.30E-10 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.27E-08 |
| 4 | GO:0010370: perinucleolar chromocenter | 1.48E-04 |
| 5 | GO:0008274: gamma-tubulin ring complex | 3.38E-04 |
| 6 | GO:0030095: chloroplast photosystem II | 3.92E-04 |
| 7 | GO:0009570: chloroplast stroma | 4.35E-04 |
| 8 | GO:0000923: equatorial microtubule organizing center | 7.93E-04 |
| 9 | GO:0009706: chloroplast inner membrane | 1.03E-03 |
| 10 | GO:0030286: dynein complex | 1.05E-03 |
| 11 | GO:0009579: thylakoid | 1.09E-03 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 1.36E-03 |
| 13 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.63E-03 |
| 14 | GO:0009941: chloroplast envelope | 1.66E-03 |
| 15 | GO:0000922: spindle pole | 3.44E-03 |
| 16 | GO:0005720: nuclear heterochromatin | 3.44E-03 |
| 17 | GO:0031977: thylakoid lumen | 3.60E-03 |
| 18 | GO:0016324: apical plasma membrane | 4.29E-03 |
| 19 | GO:0009508: plastid chromosome | 5.68E-03 |
| 20 | GO:0031225: anchored component of membrane | 7.12E-03 |
| 21 | GO:0005875: microtubule associated complex | 7.20E-03 |
| 22 | GO:0043234: protein complex | 7.20E-03 |
| 23 | GO:0042651: thylakoid membrane | 8.29E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 8.29E-03 |
| 25 | GO:0043231: intracellular membrane-bounded organelle | 8.68E-03 |
| 26 | GO:0005871: kinesin complex | 1.13E-02 |
| 27 | GO:0019898: extrinsic component of membrane | 1.39E-02 |
| 28 | GO:0009505: plant-type cell wall | 1.49E-02 |
| 29 | GO:0046658: anchored component of plasma membrane | 1.72E-02 |
| 30 | GO:0010319: stromule | 1.74E-02 |
| 31 | GO:0009295: nucleoid | 1.74E-02 |
| 32 | GO:0005874: microtubule | 2.41E-02 |
| 33 | GO:0031966: mitochondrial membrane | 3.80E-02 |
| 34 | GO:0009536: plastid | 4.92E-02 |
| 35 | GO:0005887: integral component of plasma membrane | 4.96E-02 |