co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G08740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070125: mitochondrial translational elongation	0.00E+00
2	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
3	GO:0090391: granum assembly	5.28E-08
4	GO:0015979: photosynthesis	2.59E-06
5	GO:1904966: positive regulation of vitamin E biosynthetic process	1.21E-05
6	GO:1904964: positive regulation of phytol biosynthetic process	1.21E-05
7	GO:0071277: cellular response to calcium ion	1.21E-05
8	GO:1902326: positive regulation of chlorophyll biosynthetic process	3.21E-05
9	GO:0071492: cellular response to UV-A	5.78E-05
10	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	8.79E-05
11	GO:0071486: cellular response to high light intensity	1.22E-04
12	GO:0009643: photosynthetic acclimation	1.98E-04
13	GO:0042549: photosystem II stabilization	1.98E-04
14	GO:0009735: response to cytokinin	2.32E-04
15	GO:1901259: chloroplast rRNA processing	2.39E-04
16	GO:0010196: nonphotochemical quenching	2.82E-04
17	GO:0009704: de-etiolation	3.27E-04
18	GO:0048564: photosystem I assembly	3.27E-04
19	GO:0032544: plastid translation	3.73E-04
20	GO:0090333: regulation of stomatal closure	4.21E-04
21	GO:0009245: lipid A biosynthetic process	4.21E-04
22	GO:0031425: chloroplast RNA processing	4.69E-04
23	GO:0006006: glucose metabolic process	6.76E-04
24	GO:0009767: photosynthetic electron transport chain	6.76E-04
25	GO:0010207: photosystem II assembly	7.31E-04
26	GO:0019253: reductive pentose-phosphate cycle	7.31E-04
27	GO:0080167: response to karrikin	1.02E-03
28	GO:0042335: cuticle development	1.34E-03
29	GO:0010027: thylakoid membrane organization	2.06E-03
30	GO:0009627: systemic acquired resistance	2.22E-03
31	GO:0042128: nitrate assimilation	2.22E-03
32	GO:0015995: chlorophyll biosynthetic process	2.30E-03
33	GO:0018298: protein-chromophore linkage	2.46E-03
34	GO:0009416: response to light stimulus	2.60E-03
35	GO:0009853: photorespiration	2.89E-03
36	GO:0055085: transmembrane transport	3.29E-03
37	GO:0009644: response to high light intensity	3.61E-03
38	GO:0006096: glycolytic process	4.70E-03
39	GO:0006633: fatty acid biosynthetic process	7.30E-03
40	GO:0006413: translational initiation	7.42E-03
41	GO:0009658: chloroplast organization	1.06E-02
42	GO:0042254: ribosome biogenesis	1.07E-02
43	GO:0006397: mRNA processing	1.67E-02
44	GO:0009611: response to wounding	2.48E-02
45	GO:0045893: positive regulation of transcription, DNA-templated	2.69E-02
46	GO:0006412: translation	2.73E-02
47	GO:0006414: translational elongation	3.25E-02
48	GO:0006979: response to oxidative stress	4.06E-02
49	GO:0055114: oxidation-reduction process	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
2	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
3	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
4	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
5	GO:0022891: substrate-specific transmembrane transporter activity	2.47E-05
6	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	3.21E-05
7	GO:0030267: glyoxylate reductase (NADP) activity	5.78E-05
8	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.78E-05
9	GO:0016168: chlorophyll binding	7.63E-05
10	GO:0016851: magnesium chelatase activity	8.79E-05
11	GO:0008453: alanine-glyoxylate transaminase activity	1.22E-04
12	GO:0043495: protein anchor	1.22E-04
13	GO:0051537: 2 iron, 2 sulfur cluster binding	1.79E-04
14	GO:0031177: phosphopantetheine binding	1.98E-04
15	GO:0051287: NAD binding	2.02E-04
16	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.39E-04
17	GO:0000035: acyl binding	2.39E-04
18	GO:0019899: enzyme binding	2.82E-04
19	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.27E-04
20	GO:0003746: translation elongation factor activity	2.89E-03
21	GO:0050661: NADP binding	3.15E-03
22	GO:0019843: rRNA binding	6.23E-03
23	GO:0003729: mRNA binding	7.75E-03
24	GO:0003743: translation initiation factor activity	8.69E-03
25	GO:0042802: identical protein binding	9.21E-03
26	GO:0003735: structural constituent of ribosome	1.04E-02
27	GO:0009055: electron carrier activity	1.71E-02
28	GO:0016887: ATPase activity	2.22E-02
29	GO:0005509: calcium ion binding	3.81E-02
30	GO:0005506: iron ion binding	3.99E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	7.70E-16
2	GO:0009535: chloroplast thylakoid membrane	1.08E-14
3	GO:0009570: chloroplast stroma	9.46E-14
4	GO:0009579: thylakoid	4.98E-12
5	GO:0009941: chloroplast envelope	2.21E-08
6	GO:0009523: photosystem II	3.73E-07
7	GO:0009515: granal stacked thylakoid	1.21E-05
8	GO:0009654: photosystem II oxygen evolving complex	1.76E-05
9	GO:0009534: chloroplast thylakoid	2.18E-05
10	GO:0010007: magnesium chelatase complex	5.78E-05
11	GO:0009539: photosystem II reaction center	3.73E-04
12	GO:0005840: ribosome	6.84E-04
13	GO:0030095: chloroplast photosystem II	7.31E-04
14	GO:0042651: thylakoid membrane	9.61E-04
15	GO:0019898: extrinsic component of membrane	1.54E-03
16	GO:0030529: intracellular ribonucleoprotein complex	2.06E-03
17	GO:0015934: large ribosomal subunit	2.71E-03
18	GO:0031977: thylakoid lumen	3.24E-03
19	GO:0009543: chloroplast thylakoid lumen	6.23E-03
20	GO:0005759: mitochondrial matrix	7.30E-03
21	GO:0048046: apoplast	1.90E-02
22	GO:0022626: cytosolic ribosome	2.37E-02
23	GO:0005777: peroxisome	2.69E-02
24	GO:0016020: membrane	2.97E-02