co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G07750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904874: positive regulation of telomerase RNA localization to Cajal body	0.00E+00
2	GO:0006412: translation	8.14E-06
3	GO:0031120: snRNA pseudouridine synthesis	2.08E-05
4	GO:0031118: rRNA pseudouridine synthesis	2.08E-05
5	GO:0006177: GMP biosynthetic process	2.08E-05
6	GO:0010197: polar nucleus fusion	7.84E-05
7	GO:0007004: telomere maintenance via telomerase	1.42E-04
8	GO:1900864: mitochondrial RNA modification	1.95E-04
9	GO:0000741: karyogamy	3.11E-04
10	GO:0000245: spliceosomal complex assembly	3.73E-04
11	GO:0016444: somatic cell DNA recombination	3.73E-04
12	GO:0009396: folic acid-containing compound biosynthetic process	4.37E-04
13	GO:0001522: pseudouridine synthesis	5.05E-04
14	GO:0006261: DNA-dependent DNA replication	5.74E-04
15	GO:0007338: single fertilization	6.45E-04
16	GO:0000387: spliceosomal snRNP assembly	7.18E-04
17	GO:0035999: tetrahydrofolate interconversion	7.18E-04
18	GO:1900865: chloroplast RNA modification	7.18E-04
19	GO:0006334: nucleosome assembly	1.56E-03
20	GO:0006730: one-carbon metabolic process	1.66E-03
21	GO:0010501: RNA secondary structure unwinding	2.07E-03
22	GO:0009409: response to cold	2.17E-03
23	GO:0006635: fatty acid beta-oxidation	2.50E-03
24	GO:0080156: mitochondrial mRNA modification	2.50E-03
25	GO:0009567: double fertilization forming a zygote and endosperm	2.85E-03
26	GO:0010311: lateral root formation	3.97E-03
27	GO:0000724: double-strand break repair via homologous recombination	4.37E-03
28	GO:0009853: photorespiration	4.51E-03
29	GO:0006099: tricarboxylic acid cycle	4.65E-03
30	GO:0008283: cell proliferation	5.37E-03
31	GO:0009553: embryo sac development	8.25E-03
32	GO:0006396: RNA processing	8.59E-03
33	GO:0000398: mRNA splicing, via spliceosome	9.30E-03
34	GO:0009790: embryo development	1.10E-02
35	GO:0042254: ribosome biogenesis	1.71E-02
36	GO:0009555: pollen development	3.90E-02
37	GO:0006457: protein folding	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0034513: box H/ACA snoRNA binding	0.00E+00
2	GO:0003723: RNA binding	1.20E-08
3	GO:0003735: structural constituent of ribosome	3.27E-07
4	GO:0048037: cofactor binding	2.08E-05
5	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.37E-05
6	GO:0003938: IMP dehydrogenase activity	5.37E-05
7	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	5.37E-05
8	GO:0070034: telomerase RNA binding	5.37E-05
9	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	5.37E-05
10	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.37E-05
11	GO:0003689: DNA clamp loader activity	2.51E-04
12	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	3.11E-04
13	GO:0030515: snoRNA binding	4.37E-04
14	GO:0000166: nucleotide binding	6.22E-04
15	GO:0008026: ATP-dependent helicase activity	6.54E-04
16	GO:0019843: rRNA binding	7.66E-04
17	GO:0000175: 3'-5'-exoribonuclease activity	1.03E-03
18	GO:0004527: exonuclease activity	2.17E-03
19	GO:0004004: ATP-dependent RNA helicase activity	3.58E-03
20	GO:0003697: single-stranded DNA binding	4.51E-03
21	GO:0042393: histone binding	4.93E-03
22	GO:0005507: copper ion binding	7.13E-03
23	GO:0003682: chromatin binding	1.75E-02
24	GO:0016887: ATPase activity	3.54E-02

Rank	GO Term	Adjusted P value
1	GO:0090661: box H/ACA telomerase RNP complex	0.00E+00
2	GO:0072589: box H/ACA scaRNP complex	0.00E+00
3	GO:0005840: ribosome	3.45E-08
4	GO:0071010: prespliceosome	5.37E-05
5	GO:0005730: nucleolus	5.40E-05
6	GO:0034715: pICln-Sm protein complex	9.50E-05
7	GO:0034719: SMN-Sm protein complex	9.50E-05
8	GO:0031429: box H/ACA snoRNP complex	1.42E-04
9	GO:0005663: DNA replication factor C complex	1.95E-04
10	GO:0005682: U5 snRNP	1.95E-04
11	GO:0015934: large ribosomal subunit	2.30E-04
12	GO:0000178: exosome (RNase complex)	2.51E-04
13	GO:0005687: U4 snRNP	2.51E-04
14	GO:0097526: spliceosomal tri-snRNP complex	2.51E-04
15	GO:0000243: commitment complex	3.11E-04
16	GO:0005739: mitochondrion	3.45E-04
17	GO:0005689: U12-type spliceosomal complex	3.73E-04
18	GO:0005685: U1 snRNP	6.45E-04
19	GO:0071011: precatalytic spliceosome	7.18E-04
20	GO:0015030: Cajal body	7.18E-04
21	GO:0016604: nuclear body	7.18E-04
22	GO:0005686: U2 snRNP	7.94E-04
23	GO:0071013: catalytic step 2 spliceosome	8.71E-04
24	GO:0022626: cytosolic ribosome	4.80E-03
25	GO:0005747: mitochondrial respiratory chain complex I	7.57E-03
26	GO:0005732: small nucleolar ribonucleoprotein complex	8.94E-03
27	GO:0009543: chloroplast thylakoid lumen	9.85E-03
28	GO:0009536: plastid	1.25E-02
29	GO:0022627: cytosolic small ribosomal subunit	1.51E-02
30	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.80E-02
31	GO:0022625: cytosolic large ribosomal subunit	2.03E-02
32	GO:0009535: chloroplast thylakoid membrane	2.28E-02
33	GO:0009534: chloroplast thylakoid	4.46E-02
34	GO:0009941: chloroplast envelope	4.77E-02