GO Enrichment Analysis of Co-expressed Genes with
AT3G07660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0006413: translational initiation | 1.50E-07 |
| 3 | GO:0046686: response to cadmium ion | 7.30E-07 |
| 4 | GO:0030150: protein import into mitochondrial matrix | 6.53E-06 |
| 5 | GO:0001731: formation of translation preinitiation complex | 1.70E-05 |
| 6 | GO:0009735: response to cytokinin | 1.75E-05 |
| 7 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 8.43E-05 |
| 8 | GO:0006434: seryl-tRNA aminoacylation | 8.43E-05 |
| 9 | GO:0006336: DNA replication-independent nucleosome assembly | 8.43E-05 |
| 10 | GO:0006626: protein targeting to mitochondrion | 1.58E-04 |
| 11 | GO:0006446: regulation of translational initiation | 1.80E-04 |
| 12 | GO:0015786: UDP-glucose transport | 2.00E-04 |
| 13 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.00E-04 |
| 14 | GO:0045859: regulation of protein kinase activity | 2.00E-04 |
| 15 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 2.00E-04 |
| 16 | GO:0006435: threonyl-tRNA aminoacylation | 2.00E-04 |
| 17 | GO:0006096: glycolytic process | 3.12E-04 |
| 18 | GO:0006421: asparaginyl-tRNA aminoacylation | 3.35E-04 |
| 19 | GO:0010253: UDP-rhamnose biosynthetic process | 3.35E-04 |
| 20 | GO:0015783: GDP-fucose transport | 3.35E-04 |
| 21 | GO:0045039: protein import into mitochondrial inner membrane | 3.35E-04 |
| 22 | GO:0032981: mitochondrial respiratory chain complex I assembly | 4.84E-04 |
| 23 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 4.84E-04 |
| 24 | GO:0072334: UDP-galactose transmembrane transport | 4.84E-04 |
| 25 | GO:0010183: pollen tube guidance | 5.85E-04 |
| 26 | GO:0031935: regulation of chromatin silencing | 6.44E-04 |
| 27 | GO:0051205: protein insertion into membrane | 6.44E-04 |
| 28 | GO:0006461: protein complex assembly | 8.14E-04 |
| 29 | GO:0016579: protein deubiquitination | 8.44E-04 |
| 30 | GO:0048831: regulation of shoot system development | 9.94E-04 |
| 31 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 9.94E-04 |
| 32 | GO:0010315: auxin efflux | 9.94E-04 |
| 33 | GO:0006458: 'de novo' protein folding | 1.18E-03 |
| 34 | GO:0000245: spliceosomal complex assembly | 1.18E-03 |
| 35 | GO:0045814: negative regulation of gene expression, epigenetic | 1.18E-03 |
| 36 | GO:0000338: protein deneddylation | 1.39E-03 |
| 37 | GO:0006099: tricarboxylic acid cycle | 1.50E-03 |
| 38 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.60E-03 |
| 39 | GO:0001558: regulation of cell growth | 1.83E-03 |
| 40 | GO:0043562: cellular response to nitrogen levels | 1.83E-03 |
| 41 | GO:0006002: fructose 6-phosphate metabolic process | 1.83E-03 |
| 42 | GO:0006098: pentose-phosphate shunt | 2.06E-03 |
| 43 | GO:0045454: cell redox homeostasis | 2.23E-03 |
| 44 | GO:0043067: regulation of programmed cell death | 2.30E-03 |
| 45 | GO:0051555: flavonol biosynthetic process | 2.56E-03 |
| 46 | GO:0006820: anion transport | 3.09E-03 |
| 47 | GO:0006108: malate metabolic process | 3.37E-03 |
| 48 | GO:0006094: gluconeogenesis | 3.37E-03 |
| 49 | GO:0002237: response to molecule of bacterial origin | 3.66E-03 |
| 50 | GO:0006412: translation | 3.87E-03 |
| 51 | GO:0090351: seedling development | 3.95E-03 |
| 52 | GO:0009225: nucleotide-sugar metabolic process | 3.95E-03 |
| 53 | GO:0034976: response to endoplasmic reticulum stress | 4.26E-03 |
| 54 | GO:0000027: ribosomal large subunit assembly | 4.57E-03 |
| 55 | GO:0051302: regulation of cell division | 4.89E-03 |
| 56 | GO:0006334: nucleosome assembly | 5.22E-03 |
| 57 | GO:0061077: chaperone-mediated protein folding | 5.22E-03 |
| 58 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.55E-03 |
| 59 | GO:0080092: regulation of pollen tube growth | 5.55E-03 |
| 60 | GO:0042127: regulation of cell proliferation | 6.24E-03 |
| 61 | GO:0042147: retrograde transport, endosome to Golgi | 6.60E-03 |
| 62 | GO:0008033: tRNA processing | 6.97E-03 |
| 63 | GO:0009749: response to glucose | 8.10E-03 |
| 64 | GO:0006511: ubiquitin-dependent protein catabolic process | 8.86E-03 |
| 65 | GO:0030163: protein catabolic process | 9.30E-03 |
| 66 | GO:0006414: translational elongation | 9.98E-03 |
| 67 | GO:0009860: pollen tube growth | 1.00E-02 |
| 68 | GO:0009793: embryo development ending in seed dormancy | 1.17E-02 |
| 69 | GO:0042128: nitrate assimilation | 1.19E-02 |
| 70 | GO:0030244: cellulose biosynthetic process | 1.33E-02 |
| 71 | GO:0048767: root hair elongation | 1.37E-02 |
| 72 | GO:0006811: ion transport | 1.42E-02 |
| 73 | GO:0010043: response to zinc ion | 1.47E-02 |
| 74 | GO:0009631: cold acclimation | 1.47E-02 |
| 75 | GO:0006979: response to oxidative stress | 1.49E-02 |
| 76 | GO:0009640: photomorphogenesis | 1.88E-02 |
| 77 | GO:0009744: response to sucrose | 1.88E-02 |
| 78 | GO:0000154: rRNA modification | 2.04E-02 |
| 79 | GO:0009846: pollen germination | 2.21E-02 |
| 80 | GO:0006364: rRNA processing | 2.32E-02 |
| 81 | GO:0009585: red, far-red light phototransduction | 2.32E-02 |
| 82 | GO:0048316: seed development | 2.68E-02 |
| 83 | GO:0016569: covalent chromatin modification | 2.86E-02 |
| 84 | GO:0009553: embryo sac development | 2.92E-02 |
| 85 | GO:0042744: hydrogen peroxide catabolic process | 3.84E-02 |
| 86 | GO:0009790: embryo development | 3.91E-02 |
| 87 | GO:0006633: fatty acid biosynthetic process | 4.12E-02 |
| 88 | GO:0010150: leaf senescence | 4.40E-02 |
| 89 | GO:0016310: phosphorylation | 4.50E-02 |
| 90 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.55E-02 |
| 91 | GO:0009739: response to gibberellin | 4.77E-02 |
| 92 | GO:0055114: oxidation-reduction process | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015926: glucosidase activity | 0.00E+00 |
| 2 | GO:0033919: glucan 1,3-alpha-glucosidase activity | 0.00E+00 |
| 3 | GO:0003743: translation initiation factor activity | 1.00E-08 |
| 4 | GO:0003746: translation elongation factor activity | 1.01E-07 |
| 5 | GO:0031369: translation initiation factor binding | 1.70E-05 |
| 6 | GO:0008135: translation factor activity, RNA binding | 5.54E-05 |
| 7 | GO:0005525: GTP binding | 8.01E-05 |
| 8 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 8.43E-05 |
| 9 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 8.43E-05 |
| 10 | GO:0008746: NAD(P)+ transhydrogenase activity | 8.43E-05 |
| 11 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 8.43E-05 |
| 12 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 8.43E-05 |
| 13 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 8.43E-05 |
| 14 | GO:0004828: serine-tRNA ligase activity | 8.43E-05 |
| 15 | GO:0004679: AMP-activated protein kinase activity | 8.43E-05 |
| 16 | GO:0003735: structural constituent of ribosome | 1.20E-04 |
| 17 | GO:0004829: threonine-tRNA ligase activity | 2.00E-04 |
| 18 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 2.00E-04 |
| 19 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 2.00E-04 |
| 20 | GO:0004618: phosphoglycerate kinase activity | 2.00E-04 |
| 21 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 2.00E-04 |
| 22 | GO:0010280: UDP-L-rhamnose synthase activity | 2.00E-04 |
| 23 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 2.00E-04 |
| 24 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 2.00E-04 |
| 25 | GO:0003714: transcription corepressor activity | 2.55E-04 |
| 26 | GO:0004816: asparagine-tRNA ligase activity | 3.35E-04 |
| 27 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 3.35E-04 |
| 28 | GO:0005457: GDP-fucose transmembrane transporter activity | 3.35E-04 |
| 29 | GO:0008469: histone-arginine N-methyltransferase activity | 3.35E-04 |
| 30 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 3.35E-04 |
| 31 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.35E-04 |
| 32 | GO:0019003: GDP binding | 3.35E-04 |
| 33 | GO:0003924: GTPase activity | 4.78E-04 |
| 34 | GO:0005460: UDP-glucose transmembrane transporter activity | 4.84E-04 |
| 35 | GO:0019843: rRNA binding | 5.30E-04 |
| 36 | GO:0004576: oligosaccharyl transferase activity | 6.44E-04 |
| 37 | GO:0005459: UDP-galactose transmembrane transporter activity | 8.14E-04 |
| 38 | GO:0005524: ATP binding | 9.60E-04 |
| 39 | GO:0036402: proteasome-activating ATPase activity | 9.94E-04 |
| 40 | GO:0016615: malate dehydrogenase activity | 9.94E-04 |
| 41 | GO:0004332: fructose-bisphosphate aldolase activity | 9.94E-04 |
| 42 | GO:0000166: nucleotide binding | 1.13E-03 |
| 43 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.15E-03 |
| 44 | GO:0031491: nucleosome binding | 1.18E-03 |
| 45 | GO:0019887: protein kinase regulator activity | 1.18E-03 |
| 46 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.18E-03 |
| 47 | GO:0030060: L-malate dehydrogenase activity | 1.18E-03 |
| 48 | GO:0050897: cobalt ion binding | 1.32E-03 |
| 49 | GO:0030515: snoRNA binding | 1.39E-03 |
| 50 | GO:0008235: metalloexopeptidase activity | 1.39E-03 |
| 51 | GO:0003872: 6-phosphofructokinase activity | 1.39E-03 |
| 52 | GO:0003729: mRNA binding | 1.42E-03 |
| 53 | GO:0015288: porin activity | 1.60E-03 |
| 54 | GO:0008308: voltage-gated anion channel activity | 1.83E-03 |
| 55 | GO:0000989: transcription factor activity, transcription factor binding | 2.06E-03 |
| 56 | GO:0005515: protein binding | 2.71E-03 |
| 57 | GO:0044183: protein binding involved in protein folding | 2.82E-03 |
| 58 | GO:0015266: protein channel activity | 3.37E-03 |
| 59 | GO:0017025: TBP-class protein binding | 3.95E-03 |
| 60 | GO:0031418: L-ascorbic acid binding | 4.57E-03 |
| 61 | GO:0051087: chaperone binding | 4.89E-03 |
| 62 | GO:0004298: threonine-type endopeptidase activity | 5.22E-03 |
| 63 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 5.22E-03 |
| 64 | GO:0003756: protein disulfide isomerase activity | 6.24E-03 |
| 65 | GO:0008514: organic anion transmembrane transporter activity | 6.24E-03 |
| 66 | GO:0047134: protein-disulfide reductase activity | 6.60E-03 |
| 67 | GO:0004791: thioredoxin-disulfide reductase activity | 7.72E-03 |
| 68 | GO:0016853: isomerase activity | 7.72E-03 |
| 69 | GO:0010181: FMN binding | 7.72E-03 |
| 70 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 8.50E-03 |
| 71 | GO:0008233: peptidase activity | 1.14E-02 |
| 72 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.57E-02 |
| 73 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.72E-02 |
| 74 | GO:0051082: unfolded protein binding | 2.98E-02 |
| 75 | GO:0016746: transferase activity, transferring acyl groups | 3.05E-02 |
| 76 | GO:0008026: ATP-dependent helicase activity | 3.11E-02 |
| 77 | GO:0016829: lyase activity | 3.70E-02 |
| 78 | GO:0008565: protein transporter activity | 3.98E-02 |
| 79 | GO:0005507: copper ion binding | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 3 | GO:0005829: cytosol | 6.24E-16 |
| 4 | GO:0005730: nucleolus | 1.03E-06 |
| 5 | GO:0005737: cytoplasm | 3.08E-06 |
| 6 | GO:0016282: eukaryotic 43S preinitiation complex | 1.70E-05 |
| 7 | GO:0022626: cytosolic ribosome | 1.98E-05 |
| 8 | GO:0033290: eukaryotic 48S preinitiation complex | 2.44E-05 |
| 9 | GO:0022625: cytosolic large ribosomal subunit | 2.72E-05 |
| 10 | GO:0045252: oxoglutarate dehydrogenase complex | 8.43E-05 |
| 11 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 8.43E-05 |
| 12 | GO:0009506: plasmodesma | 9.04E-05 |
| 13 | GO:0015934: large ribosomal subunit | 1.00E-04 |
| 14 | GO:0005774: vacuolar membrane | 1.03E-04 |
| 15 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.18E-04 |
| 16 | GO:0016020: membrane | 1.69E-04 |
| 17 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.05E-04 |
| 18 | GO:0005840: ribosome | 7.74E-04 |
| 19 | GO:0031428: box C/D snoRNP complex | 9.94E-04 |
| 20 | GO:0005851: eukaryotic translation initiation factor 2B complex | 9.94E-04 |
| 21 | GO:0030904: retromer complex | 9.94E-04 |
| 22 | GO:0031597: cytosolic proteasome complex | 1.18E-03 |
| 23 | GO:0031595: nuclear proteasome complex | 1.39E-03 |
| 24 | GO:0031902: late endosome membrane | 1.70E-03 |
| 25 | GO:0000326: protein storage vacuole | 1.83E-03 |
| 26 | GO:0046930: pore complex | 1.83E-03 |
| 27 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.83E-03 |
| 28 | GO:0005742: mitochondrial outer membrane translocase complex | 1.83E-03 |
| 29 | GO:0008180: COP9 signalosome | 2.06E-03 |
| 30 | GO:0005783: endoplasmic reticulum | 2.15E-03 |
| 31 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.30E-03 |
| 32 | GO:0000502: proteasome complex | 2.47E-03 |
| 33 | GO:0005743: mitochondrial inner membrane | 2.65E-03 |
| 34 | GO:0032040: small-subunit processome | 3.09E-03 |
| 35 | GO:0005773: vacuole | 4.01E-03 |
| 36 | GO:0005741: mitochondrial outer membrane | 5.22E-03 |
| 37 | GO:0005839: proteasome core complex | 5.22E-03 |
| 38 | GO:0009532: plastid stroma | 5.22E-03 |
| 39 | GO:0000790: nuclear chromatin | 6.60E-03 |
| 40 | GO:0005618: cell wall | 7.88E-03 |
| 41 | GO:0010319: stromule | 1.01E-02 |
| 42 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.02E-02 |
| 43 | GO:0030529: intracellular ribonucleoprotein complex | 1.10E-02 |
| 44 | GO:0005788: endoplasmic reticulum lumen | 1.14E-02 |
| 45 | GO:0005794: Golgi apparatus | 1.63E-02 |
| 46 | GO:0090406: pollen tube | 1.88E-02 |
| 47 | GO:0048046: apoplast | 2.31E-02 |
| 48 | GO:0005747: mitochondrial respiratory chain complex I | 2.68E-02 |
| 49 | GO:0005834: heterotrimeric G-protein complex | 2.74E-02 |
| 50 | GO:0005886: plasma membrane | 3.27E-02 |
| 51 | GO:0010287: plastoglobule | 3.37E-02 |
| 52 | GO:0005623: cell | 3.57E-02 |
| 53 | GO:0005759: mitochondrial matrix | 4.12E-02 |