GO Enrichment Analysis of Co-expressed Genes with
AT3G07480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046487: glyoxylate metabolic process | 0.00E+00 |
| 2 | GO:0007530: sex determination | 0.00E+00 |
| 3 | GO:0006412: translation | 4.47E-29 |
| 4 | GO:0042254: ribosome biogenesis | 6.70E-14 |
| 5 | GO:0006511: ubiquitin-dependent protein catabolic process | 9.31E-07 |
| 6 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.08E-06 |
| 7 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.00E-06 |
| 8 | GO:0009735: response to cytokinin | 2.27E-05 |
| 9 | GO:0043248: proteasome assembly | 4.89E-05 |
| 10 | GO:0000028: ribosomal small subunit assembly | 1.18E-04 |
| 11 | GO:0032365: intracellular lipid transport | 1.60E-04 |
| 12 | GO:0098656: anion transmembrane transport | 1.80E-04 |
| 13 | GO:0006820: anion transport | 3.42E-04 |
| 14 | GO:0051788: response to misfolded protein | 3.65E-04 |
| 15 | GO:0046686: response to cadmium ion | 5.75E-04 |
| 16 | GO:0009150: purine ribonucleotide metabolic process | 5.97E-04 |
| 17 | GO:0045793: positive regulation of cell size | 5.97E-04 |
| 18 | GO:0006241: CTP biosynthetic process | 8.53E-04 |
| 19 | GO:0006165: nucleoside diphosphate phosphorylation | 8.53E-04 |
| 20 | GO:0006228: UTP biosynthetic process | 8.53E-04 |
| 21 | GO:0009647: skotomorphogenesis | 8.53E-04 |
| 22 | GO:0032877: positive regulation of DNA endoreduplication | 8.53E-04 |
| 23 | GO:0070301: cellular response to hydrogen peroxide | 8.53E-04 |
| 24 | GO:0000413: protein peptidyl-prolyl isomerization | 1.09E-03 |
| 25 | GO:0006183: GTP biosynthetic process | 1.13E-03 |
| 26 | GO:0010363: regulation of plant-type hypersensitive response | 1.13E-03 |
| 27 | GO:0032366: intracellular sterol transport | 1.13E-03 |
| 28 | GO:0051781: positive regulation of cell division | 1.13E-03 |
| 29 | GO:0010483: pollen tube reception | 1.13E-03 |
| 30 | GO:0036065: fucosylation | 1.43E-03 |
| 31 | GO:0018279: protein N-linked glycosylation via asparagine | 1.43E-03 |
| 32 | GO:1901001: negative regulation of response to salt stress | 2.11E-03 |
| 33 | GO:0009612: response to mechanical stimulus | 2.11E-03 |
| 34 | GO:0009554: megasporogenesis | 2.11E-03 |
| 35 | GO:0032880: regulation of protein localization | 2.48E-03 |
| 36 | GO:0048528: post-embryonic root development | 2.48E-03 |
| 37 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.88E-03 |
| 38 | GO:0009617: response to bacterium | 2.96E-03 |
| 39 | GO:0009651: response to salt stress | 3.08E-03 |
| 40 | GO:0022900: electron transport chain | 3.29E-03 |
| 41 | GO:0009853: photorespiration | 3.40E-03 |
| 42 | GO:0009245: lipid A biosynthetic process | 3.72E-03 |
| 43 | GO:0006098: pentose-phosphate shunt | 3.72E-03 |
| 44 | GO:0009060: aerobic respiration | 3.72E-03 |
| 45 | GO:0010449: root meristem growth | 4.17E-03 |
| 46 | GO:0009926: auxin polar transport | 4.37E-03 |
| 47 | GO:0009793: embryo development ending in seed dormancy | 4.53E-03 |
| 48 | GO:0048229: gametophyte development | 5.12E-03 |
| 49 | GO:0006790: sulfur compound metabolic process | 5.62E-03 |
| 50 | GO:0010628: positive regulation of gene expression | 6.14E-03 |
| 51 | GO:0006626: protein targeting to mitochondrion | 6.14E-03 |
| 52 | GO:0006094: gluconeogenesis | 6.14E-03 |
| 53 | GO:0045454: cell redox homeostasis | 6.79E-03 |
| 54 | GO:0009969: xyloglucan biosynthetic process | 7.22E-03 |
| 55 | GO:0009626: plant-type hypersensitive response | 7.40E-03 |
| 56 | GO:0000027: ribosomal large subunit assembly | 8.38E-03 |
| 57 | GO:0006406: mRNA export from nucleus | 8.38E-03 |
| 58 | GO:0006289: nucleotide-excision repair | 8.38E-03 |
| 59 | GO:0006487: protein N-linked glycosylation | 8.38E-03 |
| 60 | GO:0000398: mRNA splicing, via spliceosome | 9.66E-03 |
| 61 | GO:0007005: mitochondrion organization | 1.02E-02 |
| 62 | GO:0010183: pollen tube guidance | 1.50E-02 |
| 63 | GO:0048825: cotyledon development | 1.50E-02 |
| 64 | GO:0009556: microsporogenesis | 1.50E-02 |
| 65 | GO:0010193: response to ozone | 1.58E-02 |
| 66 | GO:0000302: response to reactive oxygen species | 1.58E-02 |
| 67 | GO:0006635: fatty acid beta-oxidation | 1.58E-02 |
| 68 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.62E-02 |
| 69 | GO:0009630: gravitropism | 1.65E-02 |
| 70 | GO:0030163: protein catabolic process | 1.73E-02 |
| 71 | GO:0008380: RNA splicing | 1.73E-02 |
| 72 | GO:0006914: autophagy | 1.81E-02 |
| 73 | GO:0000910: cytokinesis | 1.97E-02 |
| 74 | GO:0009409: response to cold | 1.98E-02 |
| 75 | GO:0010029: regulation of seed germination | 2.13E-02 |
| 76 | GO:0016049: cell growth | 2.39E-02 |
| 77 | GO:0009817: defense response to fungus, incompatible interaction | 2.47E-02 |
| 78 | GO:0009832: plant-type cell wall biogenesis | 2.56E-02 |
| 79 | GO:0010043: response to zinc ion | 2.74E-02 |
| 80 | GO:0000724: double-strand break repair via homologous recombination | 2.84E-02 |
| 81 | GO:0006099: tricarboxylic acid cycle | 3.02E-02 |
| 82 | GO:0008283: cell proliferation | 3.51E-02 |
| 83 | GO:0051707: response to other organism | 3.51E-02 |
| 84 | GO:0009644: response to high light intensity | 3.71E-02 |
| 85 | GO:0048364: root development | 4.28E-02 |
| 86 | GO:0006486: protein glycosylation | 4.34E-02 |
| 87 | GO:0009736: cytokinin-activated signaling pathway | 4.34E-02 |
| 88 | GO:0009909: regulation of flower development | 4.66E-02 |
| 89 | GO:0006096: glycolytic process | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 2 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 9.15E-36 |
| 4 | GO:0004298: threonine-type endopeptidase activity | 1.18E-12 |
| 5 | GO:0008233: peptidase activity | 7.14E-08 |
| 6 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.08E-06 |
| 7 | GO:0003729: mRNA binding | 2.89E-06 |
| 8 | GO:0015288: porin activity | 1.18E-04 |
| 9 | GO:0008308: voltage-gated anion channel activity | 1.47E-04 |
| 10 | GO:0019786: Atg8-specific protease activity | 1.60E-04 |
| 11 | GO:0015157: oligosaccharide transmembrane transporter activity | 1.60E-04 |
| 12 | GO:0005080: protein kinase C binding | 1.60E-04 |
| 13 | GO:0035614: snRNA stem-loop binding | 1.60E-04 |
| 14 | GO:0019843: rRNA binding | 2.20E-04 |
| 15 | GO:0032934: sterol binding | 3.65E-04 |
| 16 | GO:0019779: Atg8 activating enzyme activity | 3.65E-04 |
| 17 | GO:0030619: U1 snRNA binding | 3.65E-04 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.43E-04 |
| 19 | GO:0004550: nucleoside diphosphate kinase activity | 8.53E-04 |
| 20 | GO:0047627: adenylylsulfatase activity | 8.53E-04 |
| 21 | GO:0070628: proteasome binding | 1.13E-03 |
| 22 | GO:0019776: Atg8 ligase activity | 1.13E-03 |
| 23 | GO:0010011: auxin binding | 1.13E-03 |
| 24 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.43E-03 |
| 25 | GO:0004332: fructose-bisphosphate aldolase activity | 1.76E-03 |
| 26 | GO:0031593: polyubiquitin binding | 1.76E-03 |
| 27 | GO:0031177: phosphopantetheine binding | 1.76E-03 |
| 28 | GO:0000035: acyl binding | 2.11E-03 |
| 29 | GO:0051920: peroxiredoxin activity | 2.11E-03 |
| 30 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 2.48E-03 |
| 31 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.88E-03 |
| 32 | GO:0016209: antioxidant activity | 2.88E-03 |
| 33 | GO:0008417: fucosyltransferase activity | 3.72E-03 |
| 34 | GO:0001055: RNA polymerase II activity | 4.17E-03 |
| 35 | GO:0004129: cytochrome-c oxidase activity | 5.12E-03 |
| 36 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.12E-03 |
| 37 | GO:0001054: RNA polymerase I activity | 5.12E-03 |
| 38 | GO:0001056: RNA polymerase III activity | 5.62E-03 |
| 39 | GO:0004089: carbonate dehydratase activity | 6.14E-03 |
| 40 | GO:0043130: ubiquitin binding | 8.38E-03 |
| 41 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.36E-02 |
| 42 | GO:0004872: receptor activity | 1.50E-02 |
| 43 | GO:0003684: damaged DNA binding | 1.81E-02 |
| 44 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.47E-02 |
| 45 | GO:0050897: cobalt ion binding | 2.74E-02 |
| 46 | GO:0003993: acid phosphatase activity | 3.02E-02 |
| 47 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005840: ribosome | 1.11E-30 |
| 2 | GO:0022626: cytosolic ribosome | 2.36E-22 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 4.68E-21 |
| 4 | GO:0000502: proteasome complex | 9.21E-16 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 2.31E-14 |
| 6 | GO:0005839: proteasome core complex | 1.18E-12 |
| 7 | GO:0005774: vacuolar membrane | 5.61E-11 |
| 8 | GO:0005829: cytosol | 4.11E-09 |
| 9 | GO:0005737: cytoplasm | 1.30E-07 |
| 10 | GO:0009506: plasmodesma | 1.50E-07 |
| 11 | GO:0005750: mitochondrial respiratory chain complex III | 2.50E-07 |
| 12 | GO:0005730: nucleolus | 6.10E-07 |
| 13 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 1.95E-05 |
| 14 | GO:0005773: vacuole | 2.05E-05 |
| 15 | GO:0015934: large ribosomal subunit | 2.28E-05 |
| 16 | GO:0005618: cell wall | 2.91E-05 |
| 17 | GO:0015935: small ribosomal subunit | 3.83E-05 |
| 18 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.47E-04 |
| 19 | GO:0046930: pore complex | 1.47E-04 |
| 20 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.97E-04 |
| 21 | GO:0009536: plastid | 3.33E-04 |
| 22 | GO:0035145: exon-exon junction complex | 3.65E-04 |
| 23 | GO:0045271: respiratory chain complex I | 6.66E-04 |
| 24 | GO:0005741: mitochondrial outer membrane | 7.30E-04 |
| 25 | GO:0005775: vacuolar lumen | 8.53E-04 |
| 26 | GO:0005776: autophagosome | 1.13E-03 |
| 27 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 1.13E-03 |
| 28 | GO:0005777: peroxisome | 1.24E-03 |
| 29 | GO:0008250: oligosaccharyltransferase complex | 1.43E-03 |
| 30 | GO:0005746: mitochondrial respiratory chain | 1.43E-03 |
| 31 | GO:0005783: endoplasmic reticulum | 2.04E-03 |
| 32 | GO:0009507: chloroplast | 2.31E-03 |
| 33 | GO:0000421: autophagosome membrane | 2.88E-03 |
| 34 | GO:0045273: respiratory chain complex II | 2.88E-03 |
| 35 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 2.88E-03 |
| 36 | GO:0005736: DNA-directed RNA polymerase I complex | 3.72E-03 |
| 37 | GO:0005685: U1 snRNP | 3.72E-03 |
| 38 | GO:0005666: DNA-directed RNA polymerase III complex | 4.17E-03 |
| 39 | GO:0015030: Cajal body | 4.17E-03 |
| 40 | GO:0005740: mitochondrial envelope | 4.64E-03 |
| 41 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.64E-03 |
| 42 | GO:0031966: mitochondrial membrane | 5.48E-03 |
| 43 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.62E-03 |
| 44 | GO:0005681: spliceosomal complex | 6.95E-03 |
| 45 | GO:0005747: mitochondrial respiratory chain complex I | 7.18E-03 |
| 46 | GO:0005739: mitochondrion | 7.72E-03 |
| 47 | GO:0000419: DNA-directed RNA polymerase V complex | 7.79E-03 |
| 48 | GO:0005769: early endosome | 7.79E-03 |
| 49 | GO:0005758: mitochondrial intermembrane space | 8.38E-03 |
| 50 | GO:0070469: respiratory chain | 8.97E-03 |
| 51 | GO:0031410: cytoplasmic vesicle | 1.02E-02 |
| 52 | GO:0005654: nucleoplasm | 1.02E-02 |
| 53 | GO:0005886: plasma membrane | 1.40E-02 |
| 54 | GO:0032580: Golgi cisterna membrane | 1.81E-02 |
| 55 | GO:0030529: intracellular ribonucleoprotein complex | 2.05E-02 |
| 56 | GO:0005788: endoplasmic reticulum lumen | 2.13E-02 |
| 57 | GO:0000786: nucleosome | 2.84E-02 |
| 58 | GO:0005819: spindle | 3.12E-02 |
| 59 | GO:0016020: membrane | 4.13E-02 |
| 60 | GO:0016607: nuclear speck | 4.99E-02 |