co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G05800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:1905177: tracheary element differentiation	0.00E+00
3	GO:0071712: ER-associated misfolded protein catabolic process	1.97E-04
4	GO:0032527: protein exit from endoplasmic reticulum	1.97E-04
5	GO:0032940: secretion by cell	3.29E-04
6	GO:0010623: programmed cell death involved in cell development	3.29E-04
7	GO:1901000: regulation of response to salt stress	4.75E-04
8	GO:0030100: regulation of endocytosis	4.75E-04
9	GO:0009058: biosynthetic process	5.47E-04
10	GO:0006808: regulation of nitrogen utilization	6.32E-04
11	GO:0015689: molybdate ion transport	6.32E-04
12	GO:0022622: root system development	6.32E-04
13	GO:0010508: positive regulation of autophagy	6.32E-04
14	GO:0071585: detoxification of cadmium ion	6.32E-04
15	GO:0006461: protein complex assembly	8.00E-04
16	GO:0006656: phosphatidylcholine biosynthetic process	8.00E-04
17	GO:0000470: maturation of LSU-rRNA	9.77E-04
18	GO:0009913: epidermal cell differentiation	9.77E-04
19	GO:0047484: regulation of response to osmotic stress	9.77E-04
20	GO:0009955: adaxial/abaxial pattern specification	1.16E-03
21	GO:0071470: cellular response to osmotic stress	1.16E-03
22	GO:0009631: cold acclimation	1.28E-03
23	GO:0032880: regulation of protein localization	1.36E-03
24	GO:0016051: carbohydrate biosynthetic process	1.40E-03
25	GO:0008610: lipid biosynthetic process	1.57E-03
26	GO:0035265: organ growth	1.57E-03
27	GO:0030091: protein repair	1.57E-03
28	GO:0042761: very long-chain fatty acid biosynthetic process	2.26E-03
29	GO:0006949: syncytium formation	2.51E-03
30	GO:0043086: negative regulation of catalytic activity	2.83E-03
31	GO:0045037: protein import into chloroplast stroma	3.03E-03
32	GO:0006979: response to oxidative stress	3.19E-03
33	GO:2000012: regulation of auxin polar transport	3.31E-03
34	GO:0010102: lateral root morphogenesis	3.31E-03
35	GO:0010025: wax biosynthetic process	4.18E-03
36	GO:0030150: protein import into mitochondrial matrix	4.48E-03
37	GO:0006289: nucleotide-excision repair	4.48E-03
38	GO:0009409: response to cold	4.99E-03
39	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.78E-03
40	GO:0010089: xylem development	6.13E-03
41	GO:0006284: base-excision repair	6.13E-03
42	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.48E-03
43	GO:0070417: cellular response to cold	6.48E-03
44	GO:0008284: positive regulation of cell proliferation	6.48E-03
45	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	6.54E-03
46	GO:0009739: response to gibberellin	6.54E-03
47	GO:0009958: positive gravitropism	7.20E-03
48	GO:0006885: regulation of pH	7.20E-03
49	GO:0048825: cotyledon development	7.95E-03
50	GO:0009749: response to glucose	7.95E-03
51	GO:0009828: plant-type cell wall loosening	9.53E-03
52	GO:0006310: DNA recombination	9.53E-03
53	GO:0019760: glucosinolate metabolic process	9.53E-03
54	GO:0080167: response to karrikin	1.12E-02
55	GO:0007568: aging	1.44E-02
56	GO:0048527: lateral root development	1.44E-02
57	GO:0009733: response to auxin	1.64E-02
58	GO:0006281: DNA repair	1.66E-02
59	GO:0006631: fatty acid metabolic process	1.74E-02
60	GO:0009753: response to jasmonic acid	1.78E-02
61	GO:0010114: response to red light	1.84E-02
62	GO:0009744: response to sucrose	1.84E-02
63	GO:0009640: photomorphogenesis	1.84E-02
64	GO:0008283: cell proliferation	1.84E-02
65	GO:0015031: protein transport	1.92E-02
66	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.11E-02
67	GO:0009664: plant-type cell wall organization	2.16E-02
68	GO:0006812: cation transport	2.16E-02
69	GO:0006813: potassium ion transport	2.28E-02
70	GO:0009845: seed germination	3.63E-02
71	GO:0045490: pectin catabolic process	4.32E-02
72	GO:0007166: cell surface receptor signaling pathway	4.75E-02
73	GO:0006470: protein dephosphorylation	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
2	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	8.25E-05
3	GO:0004105: choline-phosphate cytidylyltransferase activity	8.25E-05
4	GO:0044390: ubiquitin-like protein conjugating enzyme binding	1.97E-04
5	GO:0047216: inositol 3-alpha-galactosyltransferase activity	1.97E-04
6	GO:0017150: tRNA dihydrouridine synthase activity	3.29E-04
7	GO:0017108: 5'-flap endonuclease activity	3.29E-04
8	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	6.32E-04
9	GO:0019104: DNA N-glycosylase activity	6.32E-04
10	GO:0015098: molybdate ion transmembrane transporter activity	6.32E-04
11	GO:0008375: acetylglucosaminyltransferase activity	9.62E-04
12	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.16E-03
13	GO:0004620: phospholipase activity	1.36E-03
14	GO:0015288: porin activity	1.57E-03
15	GO:0016209: antioxidant activity	1.57E-03
16	GO:0015020: glucuronosyltransferase activity	2.51E-03
17	GO:0047372: acylglycerol lipase activity	2.77E-03
18	GO:0015266: protein channel activity	3.31E-03
19	GO:0008083: growth factor activity	3.59E-03
20	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.59E-03
21	GO:0046910: pectinesterase inhibitor activity	5.45E-03
22	GO:0016757: transferase activity, transferring glycosyl groups	5.75E-03
23	GO:0030570: pectate lyase activity	5.78E-03
24	GO:0005451: monovalent cation:proton antiporter activity	6.83E-03
25	GO:0003713: transcription coactivator activity	7.20E-03
26	GO:0015299: solute:proton antiporter activity	7.57E-03
27	GO:0048038: quinone binding	8.33E-03
28	GO:0004518: nuclease activity	8.73E-03
29	GO:0015385: sodium:proton antiporter activity	9.12E-03
30	GO:0003684: damaged DNA binding	9.53E-03
31	GO:0061630: ubiquitin protein ligase activity	1.18E-02
32	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.30E-02
33	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.54E-02
34	GO:0003993: acid phosphatase activity	1.59E-02
35	GO:0003924: GTPase activity	1.66E-02
36	GO:0016491: oxidoreductase activity	2.01E-02
37	GO:0015171: amino acid transmembrane transporter activity	2.45E-02
38	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.62E-02
39	GO:0016874: ligase activity	2.80E-02
40	GO:0016758: transferase activity, transferring hexosyl groups	3.37E-02
41	GO:0019843: rRNA binding	3.43E-02
42	GO:0016829: lyase activity	3.63E-02
43	GO:0043565: sequence-specific DNA binding	3.65E-02
44	GO:0015144: carbohydrate transmembrane transporter activity	3.90E-02
45	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.11E-02
46	GO:0005351: sugar:proton symporter activity	4.25E-02
47	GO:0005525: GTP binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0033557: Slx1-Slx4 complex	0.00E+00
3	GO:0031357: integral component of chloroplast inner membrane	1.97E-04
4	GO:0036513: Derlin-1 retrotranslocation complex	4.75E-04
5	GO:0009527: plastid outer membrane	6.32E-04
6	GO:0005798: Golgi-associated vesicle	9.77E-04
7	GO:0031305: integral component of mitochondrial inner membrane	1.57E-03
8	GO:0046930: pore complex	1.79E-03
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.02E-03
10	GO:0005875: microtubule associated complex	4.18E-03
11	GO:0005769: early endosome	4.18E-03
12	GO:0005744: mitochondrial inner membrane presequence translocase complex	6.13E-03
13	GO:0009707: chloroplast outer membrane	1.30E-02
14	GO:0012505: endomembrane system	2.86E-02
15	GO:0016020: membrane	3.11E-02
16	GO:0009535: chloroplast thylakoid membrane	3.89E-02
17	GO:0005615: extracellular space	4.67E-02
18	GO:0005802: trans-Golgi network	4.71E-02