co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G05670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
2	GO:0010046: response to mycotoxin	0.00E+00
3	GO:0009560: embryo sac egg cell differentiation	0.00E+00
4	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
5	GO:0010245: radial microtubular system formation	0.00E+00
6	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
7	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
8	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
9	GO:2000070: regulation of response to water deprivation	2.95E-05
10	GO:0009609: response to symbiotic bacterium	6.58E-05
11	GO:0051446: positive regulation of meiotic cell cycle	6.58E-05
12	GO:2000030: regulation of response to red or far red light	1.59E-04
13	GO:0080168: abscisic acid transport	2.69E-04
14	GO:0006081: cellular aldehyde metabolic process	2.69E-04
15	GO:0006011: UDP-glucose metabolic process	2.69E-04
16	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.69E-04
17	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	2.69E-04
18	GO:1902448: positive regulation of shade avoidance	2.69E-04
19	GO:0009742: brassinosteroid mediated signaling pathway	2.80E-04
20	GO:0009737: response to abscisic acid	3.34E-04
21	GO:0000271: polysaccharide biosynthetic process	3.43E-04
22	GO:0033014: tetrapyrrole biosynthetic process	3.90E-04
23	GO:0009226: nucleotide-sugar biosynthetic process	3.90E-04
24	GO:0009558: embryo sac cellularization	3.90E-04
25	GO:0006986: response to unfolded protein	3.90E-04
26	GO:0009399: nitrogen fixation	3.90E-04
27	GO:0001709: cell fate determination	5.20E-04
28	GO:1902347: response to strigolactone	5.20E-04
29	GO:0009694: jasmonic acid metabolic process	5.20E-04
30	GO:0006536: glutamate metabolic process	5.20E-04
31	GO:0033356: UDP-L-arabinose metabolic process	5.20E-04
32	GO:0007112: male meiosis cytokinesis	5.20E-04
33	GO:0009816: defense response to bacterium, incompatible interaction	6.87E-04
34	GO:0009611: response to wounding	7.13E-04
35	GO:0047484: regulation of response to osmotic stress	8.06E-04
36	GO:1900425: negative regulation of defense response to bacterium	8.06E-04
37	GO:0006811: ion transport	9.21E-04
38	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	9.59E-04
39	GO:0010555: response to mannitol	9.59E-04
40	GO:1901001: negative regulation of response to salt stress	9.59E-04
41	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.12E-03
42	GO:1902074: response to salt	1.12E-03
43	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.12E-03
44	GO:0006401: RNA catabolic process	1.12E-03
45	GO:0006955: immune response	1.12E-03
46	GO:0071669: plant-type cell wall organization or biogenesis	1.12E-03
47	GO:1900150: regulation of defense response to fungus	1.29E-03
48	GO:0006997: nucleus organization	1.47E-03
49	GO:0030968: endoplasmic reticulum unfolded protein response	1.47E-03
50	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.65E-03
51	GO:0006783: heme biosynthetic process	1.65E-03
52	GO:0006364: rRNA processing	1.79E-03
53	GO:0009585: red, far-red light phototransduction	1.79E-03
54	GO:2000280: regulation of root development	1.85E-03
55	GO:0006779: porphyrin-containing compound biosynthetic process	1.85E-03
56	GO:0010018: far-red light signaling pathway	1.85E-03
57	GO:0009751: response to salicylic acid	1.88E-03
58	GO:0048829: root cap development	2.05E-03
59	GO:0006782: protoporphyrinogen IX biosynthetic process	2.05E-03
60	GO:0019538: protein metabolic process	2.05E-03
61	GO:0009753: response to jasmonic acid	2.09E-03
62	GO:0048229: gametophyte development	2.26E-03
63	GO:0010015: root morphogenesis	2.26E-03
64	GO:0071365: cellular response to auxin stimulus	2.48E-03
65	GO:0006820: anion transport	2.48E-03
66	GO:0009873: ethylene-activated signaling pathway	2.64E-03
67	GO:0006351: transcription, DNA-templated	2.82E-03
68	GO:0000398: mRNA splicing, via spliceosome	2.91E-03
69	GO:0048467: gynoecium development	2.93E-03
70	GO:0009409: response to cold	3.15E-03
71	GO:0080188: RNA-directed DNA methylation	3.16E-03
72	GO:0042753: positive regulation of circadian rhythm	3.40E-03
73	GO:2000377: regulation of reactive oxygen species metabolic process	3.65E-03
74	GO:0051302: regulation of cell division	3.90E-03
75	GO:0006355: regulation of transcription, DNA-templated	3.95E-03
76	GO:0009269: response to desiccation	4.17E-03
77	GO:0007623: circadian rhythm	4.34E-03
78	GO:0030433: ubiquitin-dependent ERAD pathway	4.43E-03
79	GO:0031348: negative regulation of defense response	4.43E-03
80	GO:0008284: positive regulation of cell proliferation	5.26E-03
81	GO:0010501: RNA secondary structure unwinding	5.55E-03
82	GO:0045489: pectin biosynthetic process	5.85E-03
83	GO:0007018: microtubule-based movement	6.15E-03
84	GO:0006814: sodium ion transport	6.15E-03
85	GO:0009749: response to glucose	6.45E-03
86	GO:0000302: response to reactive oxygen species	6.76E-03
87	GO:0010193: response to ozone	6.76E-03
88	GO:0006970: response to osmotic stress	7.21E-03
89	GO:0010090: trichome morphogenesis	7.40E-03
90	GO:0007049: cell cycle	7.47E-03
91	GO:0009639: response to red or far red light	7.73E-03
92	GO:0006914: autophagy	7.73E-03
93	GO:0007267: cell-cell signaling	8.06E-03
94	GO:0000910: cytokinesis	8.40E-03
95	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.08E-03
96	GO:0009627: systemic acquired resistance	9.44E-03
97	GO:0071555: cell wall organization	9.67E-03
98	GO:0015995: chlorophyll biosynthetic process	9.79E-03
99	GO:0048481: plant ovule development	1.05E-02
100	GO:0030244: cellulose biosynthetic process	1.05E-02
101	GO:0009832: plant-type cell wall biogenesis	1.09E-02
102	GO:0010311: lateral root formation	1.09E-02
103	GO:0010119: regulation of stomatal movement	1.17E-02
104	GO:0045087: innate immune response	1.24E-02
105	GO:0016051: carbohydrate biosynthetic process	1.24E-02
106	GO:0009640: photomorphogenesis	1.49E-02
107	GO:0006855: drug transmembrane transport	1.66E-02
108	GO:0006812: cation transport	1.75E-02
109	GO:0009846: pollen germination	1.75E-02
110	GO:0042538: hyperosmotic salinity response	1.75E-02
111	GO:0006813: potassium ion transport	1.84E-02
112	GO:0010224: response to UV-B	1.88E-02
113	GO:0009555: pollen development	2.18E-02
114	GO:0035556: intracellular signal transduction	2.31E-02
115	GO:0009553: embryo sac development	2.31E-02
116	GO:0045893: positive regulation of transcription, DNA-templated	2.51E-02
117	GO:0006952: defense response	2.63E-02
118	GO:0006457: protein folding	2.83E-02
119	GO:0009845: seed germination	2.93E-02
120	GO:0009790: embryo development	3.09E-02
121	GO:0006633: fatty acid biosynthetic process	3.26E-02
122	GO:0010150: leaf senescence	3.49E-02
123	GO:0006470: protein dephosphorylation	3.83E-02
124	GO:0007166: cell surface receptor signaling pathway	3.83E-02
125	GO:0008380: RNA splicing	3.95E-02
126	GO:0009617: response to bacterium	3.95E-02
127	GO:0010468: regulation of gene expression	3.95E-02
128	GO:0006468: protein phosphorylation	4.27E-02
129	GO:0009414: response to water deprivation	4.30E-02
130	GO:0006979: response to oxidative stress	4.44E-02
131	GO:0009733: response to auxin	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
2	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
3	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
4	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
5	GO:0030621: U4 snRNA binding	0.00E+00
6	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
7	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
8	GO:0070566: adenylyltransferase activity	0.00E+00
9	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
10	GO:0090440: abscisic acid transporter activity	6.58E-05
11	GO:0008883: glutamyl-tRNA reductase activity	1.59E-04
12	GO:0004540: ribonuclease activity	2.23E-04
13	GO:0004383: guanylate cyclase activity	2.69E-04
14	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	2.69E-04
15	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	2.69E-04
16	GO:0004351: glutamate decarboxylase activity	3.90E-04
17	GO:0001653: peptide receptor activity	3.90E-04
18	GO:0005432: calcium:sodium antiporter activity	3.90E-04
19	GO:0008526: phosphatidylinositol transporter activity	5.20E-04
20	GO:0004659: prenyltransferase activity	5.20E-04
21	GO:0043015: gamma-tubulin binding	5.20E-04
22	GO:0004356: glutamate-ammonia ligase activity	6.60E-04
23	GO:0017070: U6 snRNA binding	6.60E-04
24	GO:0008381: mechanically-gated ion channel activity	6.60E-04
25	GO:0009922: fatty acid elongase activity	6.60E-04
26	GO:0004029: aldehyde dehydrogenase (NAD) activity	8.06E-04
27	GO:0051753: mannan synthase activity	9.59E-04
28	GO:0019899: enzyme binding	1.12E-03
29	GO:0004143: diacylglycerol kinase activity	1.12E-03
30	GO:0015491: cation:cation antiporter activity	1.29E-03
31	GO:0003951: NAD+ kinase activity	1.47E-03
32	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.85E-03
33	GO:0004521: endoribonuclease activity	2.48E-03
34	GO:0019888: protein phosphatase regulator activity	2.70E-03
35	GO:0000175: 3'-5'-exoribonuclease activity	2.70E-03
36	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.40E-03
37	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.40E-03
38	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.40E-03
39	GO:0015297: antiporter activity	4.14E-03
40	GO:0004707: MAP kinase activity	4.17E-03
41	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.43E-03
42	GO:0008017: microtubule binding	4.54E-03
43	GO:0016760: cellulose synthase (UDP-forming) activity	4.70E-03
44	GO:0018024: histone-lysine N-methyltransferase activity	5.26E-03
45	GO:0016759: cellulose synthase activity	7.73E-03
46	GO:0004004: ATP-dependent RNA helicase activity	9.79E-03
47	GO:0004806: triglyceride lipase activity	9.79E-03
48	GO:0015238: drug transmembrane transporter activity	1.09E-02
49	GO:0050661: NADP binding	1.36E-02
50	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.56E-02
51	GO:0043621: protein self-association	1.57E-02
52	GO:0016887: ATPase activity	1.91E-02
53	GO:0003777: microtubule motor activity	1.98E-02
54	GO:0031625: ubiquitin protein ligase binding	1.98E-02
55	GO:0004674: protein serine/threonine kinase activity	2.21E-02
56	GO:0003677: DNA binding	2.26E-02
57	GO:0003779: actin binding	2.31E-02
58	GO:0016746: transferase activity, transferring acyl groups	2.41E-02
59	GO:0016758: transferase activity, transferring hexosyl groups	2.72E-02
60	GO:0030170: pyridoxal phosphate binding	2.99E-02
61	GO:0005516: calmodulin binding	3.29E-02
62	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.32E-02
63	GO:0046872: metal ion binding	3.51E-02
64	GO:0005509: calcium ion binding	4.07E-02
65	GO:0044212: transcription regulatory region DNA binding	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0017053: transcriptional repressor complex	2.69E-04
2	GO:0000178: exosome (RNase complex)	6.60E-04
3	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.47E-03
4	GO:0015030: Cajal body	1.85E-03
5	GO:0005681: spliceosomal complex	2.11E-03
6	GO:0000159: protein phosphatase type 2A complex	2.26E-03
7	GO:0005634: nucleus	2.50E-03
8	GO:0005871: kinesin complex	5.26E-03
9	GO:0005770: late endosome	5.85E-03
10	GO:0005694: chromosome	7.08E-03
11	GO:0000932: P-body	8.74E-03
12	GO:0005667: transcription factor complex	9.44E-03
13	GO:0031902: late endosome membrane	1.40E-02
14	GO:0000139: Golgi membrane	1.42E-02
15	GO:0090406: pollen tube	1.49E-02
16	GO:0005886: plasma membrane	1.89E-02
17	GO:0005635: nuclear envelope	1.93E-02
18	GO:0016607: nuclear speck	2.12E-02
19	GO:0005737: cytoplasm	2.36E-02
20	GO:0009524: phragmoplast	2.88E-02
21	GO:0009506: plasmodesma	3.47E-02
22	GO:0016021: integral component of membrane	3.51E-02
23	GO:0046658: anchored component of plasma membrane	4.26E-02
24	GO:0005774: vacuolar membrane	4.58E-02