co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G05580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046967: cytosol to ER transport	0.00E+00
2	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
3	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
4	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
5	GO:0010200: response to chitin	1.21E-08
6	GO:0009611: response to wounding	7.46E-07
7	GO:0009737: response to abscisic acid	5.46E-06
8	GO:0006970: response to osmotic stress	2.30E-05
9	GO:0009695: jasmonic acid biosynthetic process	4.69E-05
10	GO:0006470: protein dephosphorylation	9.09E-05
11	GO:0006955: immune response	1.18E-04
12	GO:2000070: regulation of response to water deprivation	1.51E-04
13	GO:0009415: response to water	1.51E-04
14	GO:0006680: glucosylceramide catabolic process	1.88E-04
15	GO:0051180: vitamin transport	1.88E-04
16	GO:0030974: thiamine pyrophosphate transport	1.88E-04
17	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	1.88E-04
18	GO:0050691: regulation of defense response to virus by host	1.88E-04
19	GO:0009620: response to fungus	1.89E-04
20	GO:0030148: sphingolipid biosynthetic process	3.73E-04
21	GO:0010507: negative regulation of autophagy	4.24E-04
22	GO:0015893: drug transport	4.24E-04
23	GO:0070588: calcium ion transmembrane transport	6.12E-04
24	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	6.92E-04
25	GO:0006011: UDP-glucose metabolic process	6.92E-04
26	GO:0006598: polyamine catabolic process	6.92E-04
27	GO:0080168: abscisic acid transport	6.92E-04
28	GO:0031145: anaphase-promoting complex-dependent catabolic process	6.92E-04
29	GO:0009269: response to desiccation	9.07E-04
30	GO:0031408: oxylipin biosynthetic process	9.07E-04
31	GO:0030071: regulation of mitotic metaphase/anaphase transition	9.86E-04
32	GO:0030100: regulation of endocytosis	9.86E-04
33	GO:0033014: tetrapyrrole biosynthetic process	9.86E-04
34	GO:0009226: nucleotide-sugar biosynthetic process	9.86E-04
35	GO:0015696: ammonium transport	9.86E-04
36	GO:0048530: fruit morphogenesis	9.86E-04
37	GO:1902347: response to strigolactone	1.31E-03
38	GO:0045727: positive regulation of translation	1.31E-03
39	GO:0072488: ammonium transmembrane transport	1.31E-03
40	GO:0033356: UDP-L-arabinose metabolic process	1.31E-03
41	GO:0034440: lipid oxidation	1.31E-03
42	GO:0010107: potassium ion import	1.31E-03
43	GO:0045324: late endosome to vacuole transport	1.31E-03
44	GO:0009555: pollen development	1.45E-03
45	GO:0009164: nucleoside catabolic process	1.66E-03
46	GO:0045487: gibberellin catabolic process	1.66E-03
47	GO:0009651: response to salt stress	1.71E-03
48	GO:0010193: response to ozone	1.80E-03
49	GO:0006751: glutathione catabolic process	2.05E-03
50	GO:0006796: phosphate-containing compound metabolic process	2.05E-03
51	GO:0047484: regulation of response to osmotic stress	2.05E-03
52	GO:0010337: regulation of salicylic acid metabolic process	2.05E-03
53	GO:0080086: stamen filament development	2.46E-03
54	GO:1901001: negative regulation of response to salt stress	2.46E-03
55	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.90E-03
56	GO:0010161: red light signaling pathway	2.90E-03
57	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.90E-03
58	GO:1900057: positive regulation of leaf senescence	2.90E-03
59	GO:1900150: regulation of defense response to fungus	3.36E-03
60	GO:0006811: ion transport	3.71E-03
61	GO:0048193: Golgi vesicle transport	3.84E-03
62	GO:0009631: cold acclimation	3.88E-03
63	GO:0006783: heme biosynthetic process	4.35E-03
64	GO:0051865: protein autoubiquitination	4.35E-03
65	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.35E-03
66	GO:0009414: response to water deprivation	4.81E-03
67	GO:0008202: steroid metabolic process	4.87E-03
68	GO:0006779: porphyrin-containing compound biosynthetic process	4.87E-03
69	GO:0007346: regulation of mitotic cell cycle	4.87E-03
70	GO:0006979: response to oxidative stress	5.09E-03
71	GO:0006896: Golgi to vacuole transport	5.42E-03
72	GO:0006782: protoporphyrinogen IX biosynthetic process	5.42E-03
73	GO:0019538: protein metabolic process	5.42E-03
74	GO:0051707: response to other organism	5.48E-03
75	GO:0006952: defense response	5.63E-03
76	GO:0000209: protein polyubiquitination	5.70E-03
77	GO:0009738: abscisic acid-activated signaling pathway	5.81E-03
78	GO:0010015: root morphogenesis	5.99E-03
79	GO:0072593: reactive oxygen species metabolic process	5.99E-03
80	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.58E-03
81	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.58E-03
82	GO:0035556: intracellular signal transduction	6.63E-03
83	GO:0055046: microgametogenesis	7.19E-03
84	GO:0010102: lateral root morphogenesis	7.19E-03
85	GO:0048467: gynoecium development	7.82E-03
86	GO:0002237: response to molecule of bacterial origin	7.82E-03
87	GO:0009901: anther dehiscence	8.47E-03
88	GO:0071732: cellular response to nitric oxide	8.47E-03
89	GO:0009409: response to cold	8.51E-03
90	GO:0009863: salicylic acid mediated signaling pathway	9.83E-03
91	GO:0016998: cell wall macromolecule catabolic process	1.13E-02
92	GO:0048278: vesicle docking	1.13E-02
93	GO:0051321: meiotic cell cycle	1.13E-02
94	GO:0050832: defense response to fungus	1.16E-02
95	GO:0030245: cellulose catabolic process	1.20E-02
96	GO:0016226: iron-sulfur cluster assembly	1.20E-02
97	GO:0006468: protein phosphorylation	1.22E-02
98	GO:0071369: cellular response to ethylene stimulus	1.28E-02
99	GO:0040007: growth	1.28E-02
100	GO:0009686: gibberellin biosynthetic process	1.28E-02
101	GO:0010584: pollen exine formation	1.35E-02
102	GO:0048443: stamen development	1.35E-02
103	GO:0019722: calcium-mediated signaling	1.35E-02
104	GO:0042147: retrograde transport, endosome to Golgi	1.43E-02
105	GO:0010118: stomatal movement	1.51E-02
106	GO:0048653: anther development	1.51E-02
107	GO:0009790: embryo development	1.54E-02
108	GO:0009958: positive gravitropism	1.60E-02
109	GO:0009873: ethylene-activated signaling pathway	1.64E-02
110	GO:0061025: membrane fusion	1.68E-02
111	GO:0006814: sodium ion transport	1.68E-02
112	GO:0048544: recognition of pollen	1.68E-02
113	GO:0006623: protein targeting to vacuole	1.77E-02
114	GO:0009749: response to glucose	1.77E-02
115	GO:0006891: intra-Golgi vesicle-mediated transport	1.85E-02
116	GO:1901657: glycosyl compound metabolic process	2.03E-02
117	GO:0071281: cellular response to iron ion	2.03E-02
118	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.04E-02
119	GO:0009639: response to red or far red light	2.13E-02
120	GO:0010468: regulation of gene expression	2.18E-02
121	GO:0009617: response to bacterium	2.18E-02
122	GO:0010286: heat acclimation	2.22E-02
123	GO:0051607: defense response to virus	2.31E-02
124	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.51E-02
125	GO:0006906: vesicle fusion	2.61E-02
126	GO:0048573: photoperiodism, flowering	2.71E-02
127	GO:0006950: response to stress	2.71E-02
128	GO:0015995: chlorophyll biosynthetic process	2.71E-02
129	GO:0008219: cell death	2.91E-02
130	GO:0048481: plant ovule development	2.91E-02
131	GO:0048527: lateral root development	3.23E-02
132	GO:0045087: innate immune response	3.45E-02
133	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.62E-02
134	GO:0016192: vesicle-mediated transport	3.68E-02
135	GO:0006839: mitochondrial transport	3.78E-02
136	GO:0006897: endocytosis	3.89E-02
137	GO:0006631: fatty acid metabolic process	3.89E-02
138	GO:0009640: photomorphogenesis	4.13E-02
139	GO:0008283: cell proliferation	4.13E-02
140	GO:0042546: cell wall biogenesis	4.24E-02
141	GO:0045892: negative regulation of transcription, DNA-templated	4.25E-02
142	GO:0009644: response to high light intensity	4.36E-02
143	GO:0006855: drug transmembrane transport	4.60E-02
144	GO:0000165: MAPK cascade	4.73E-02
145	GO:0031347: regulation of defense response	4.73E-02
146	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.73E-02
147	GO:0006812: cation transport	4.85E-02
148	GO:0042538: hyperosmotic salinity response	4.85E-02
149	GO:0006351: transcription, DNA-templated	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
2	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
3	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
4	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
5	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
6	GO:0003950: NAD+ ADP-ribosyltransferase activity	8.84E-05
7	GO:0052894: norspermine:oxygen oxidoreductase activity	1.88E-04
8	GO:0090422: thiamine pyrophosphate transporter activity	1.88E-04
9	GO:0015085: calcium ion transmembrane transporter activity	1.88E-04
10	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	1.88E-04
11	GO:0090440: abscisic acid transporter activity	1.88E-04
12	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.88E-04
13	GO:0004348: glucosylceramidase activity	1.88E-04
14	GO:0016629: 12-oxophytodienoate reductase activity	4.24E-04
15	GO:0004103: choline kinase activity	4.24E-04
16	GO:0008883: glutamyl-tRNA reductase activity	4.24E-04
17	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	4.24E-04
18	GO:0045140: inositol phosphoceramide synthase activity	4.24E-04
19	GO:0004722: protein serine/threonine phosphatase activity	4.32E-04
20	GO:0004383: guanylate cyclase activity	6.92E-04
21	GO:0016165: linoleate 13S-lipoxygenase activity	6.92E-04
22	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	6.92E-04
23	GO:0046592: polyamine oxidase activity	6.92E-04
24	GO:0003840: gamma-glutamyltransferase activity	6.92E-04
25	GO:0004758: serine C-palmitoyltransferase activity	6.92E-04
26	GO:0036374: glutathione hydrolase activity	6.92E-04
27	GO:0046423: allene-oxide cyclase activity	6.92E-04
28	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	9.86E-04
29	GO:0001653: peptide receptor activity	9.86E-04
30	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	9.86E-04
31	GO:0005432: calcium:sodium antiporter activity	9.86E-04
32	GO:0004715: non-membrane spanning protein tyrosine kinase activity	9.86E-04
33	GO:0004659: prenyltransferase activity	1.31E-03
34	GO:0047631: ADP-ribose diphosphatase activity	1.66E-03
35	GO:0018685: alkane 1-monooxygenase activity	1.66E-03
36	GO:0008519: ammonium transmembrane transporter activity	2.05E-03
37	GO:0000210: NAD+ diphosphatase activity	2.05E-03
38	GO:0019900: kinase binding	2.46E-03
39	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.46E-03
40	GO:0004143: diacylglycerol kinase activity	2.90E-03
41	GO:0004427: inorganic diphosphatase activity	2.90E-03
42	GO:0008143: poly(A) binding	2.90E-03
43	GO:0004672: protein kinase activity	2.91E-03
44	GO:0015491: cation:cation antiporter activity	3.36E-03
45	GO:0008142: oxysterol binding	3.84E-03
46	GO:0003951: NAD+ kinase activity	3.84E-03
47	GO:0004864: protein phosphatase inhibitor activity	5.42E-03
48	GO:0004713: protein tyrosine kinase activity	5.42E-03
49	GO:0005262: calcium channel activity	7.19E-03
50	GO:0019888: protein phosphatase regulator activity	7.19E-03
51	GO:0005388: calcium-transporting ATPase activity	7.19E-03
52	GO:0061630: ubiquitin protein ligase activity	7.71E-03
53	GO:0008131: primary amine oxidase activity	7.82E-03
54	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.13E-02
55	GO:0008408: 3'-5' exonuclease activity	1.13E-02
56	GO:0004707: MAP kinase activity	1.13E-02
57	GO:0043565: sequence-specific DNA binding	1.25E-02
58	GO:0046872: metal ion binding	1.42E-02
59	GO:0005509: calcium ion binding	1.57E-02
60	GO:0010181: FMN binding	1.68E-02
61	GO:0015297: antiporter activity	1.74E-02
62	GO:0019901: protein kinase binding	1.77E-02
63	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.22E-02
64	GO:0102483: scopolin beta-glucosidase activity	2.71E-02
65	GO:0004806: triglyceride lipase activity	2.71E-02
66	GO:0004721: phosphoprotein phosphatase activity	2.71E-02
67	GO:0004004: ATP-dependent RNA helicase activity	2.71E-02
68	GO:0005524: ATP binding	2.88E-02
69	GO:0005096: GTPase activator activity	3.02E-02
70	GO:0015238: drug transmembrane transporter activity	3.02E-02
71	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.12E-02
72	GO:0016301: kinase activity	3.20E-02
73	GO:0000149: SNARE binding	3.67E-02
74	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.67E-02
75	GO:0008422: beta-glucosidase activity	3.67E-02
76	GO:0050661: NADP binding	3.78E-02
77	GO:0005516: calmodulin binding	4.06E-02
78	GO:0005484: SNAP receptor activity	4.13E-02
79	GO:0051537: 2 iron, 2 sulfur cluster binding	4.36E-02
80	GO:0035091: phosphatidylinositol binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0016363: nuclear matrix	8.84E-05
2	GO:0005770: late endosome	1.46E-03
3	GO:0030140: trans-Golgi network transport vesicle	2.05E-03
4	GO:0010494: cytoplasmic stress granule	4.35E-03
5	GO:0016604: nuclear body	4.87E-03
6	GO:0031902: late endosome membrane	5.05E-03
7	GO:0005886: plasma membrane	5.26E-03
8	GO:0090406: pollen tube	5.48E-03
9	GO:0000159: protein phosphatase type 2A complex	5.99E-03
10	GO:0005829: cytosol	8.70E-03
11	GO:0005758: mitochondrial intermembrane space	9.83E-03
12	GO:0005737: cytoplasm	1.15E-02
13	GO:0005634: nucleus	1.90E-02
14	GO:0016021: integral component of membrane	1.95E-02
15	GO:0009707: chloroplast outer membrane	2.91E-02
16	GO:0005789: endoplasmic reticulum membrane	3.32E-02
17	GO:0031201: SNARE complex	3.89E-02
18	GO:0031225: anchored component of membrane	4.25E-02
19	GO:0005743: mitochondrial inner membrane	4.79E-02