co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G05410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009715: chalcone biosynthetic process	0.00E+00
2	GO:0017009: protein-phycocyanobilin linkage	0.00E+00
3	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
4	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
5	GO:0042821: pyridoxal biosynthetic process	0.00E+00
6	GO:0008298: intracellular mRNA localization	0.00E+00
7	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
8	GO:0042493: response to drug	0.00E+00
9	GO:0042371: vitamin K biosynthetic process	0.00E+00
10	GO:0006399: tRNA metabolic process	0.00E+00
11	GO:0015882: L-ascorbic acid transport	0.00E+00
12	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
13	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
14	GO:0006114: glycerol biosynthetic process	0.00E+00
15	GO:0070125: mitochondrial translational elongation	0.00E+00
16	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
17	GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	0.00E+00
18	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
19	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
20	GO:0098586: cellular response to virus	0.00E+00
21	GO:0042820: vitamin B6 catabolic process	0.00E+00
22	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
23	GO:0015979: photosynthesis	6.85E-16
24	GO:0018298: protein-chromophore linkage	1.61E-08
25	GO:0009765: photosynthesis, light harvesting	3.09E-06
26	GO:0015995: chlorophyll biosynthetic process	4.74E-06
27	GO:0009658: chloroplast organization	8.03E-06
28	GO:0009773: photosynthetic electron transport in photosystem I	8.23E-06
29	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.70E-05
30	GO:0010027: thylakoid membrane organization	4.31E-05
31	GO:0009768: photosynthesis, light harvesting in photosystem I	4.75E-05
32	GO:0090391: granum assembly	5.62E-05
33	GO:0006021: inositol biosynthetic process	2.01E-04
34	GO:0010114: response to red light	2.22E-04
35	GO:0009644: response to high light intensity	2.60E-04
36	GO:0010236: plastoquinone biosynthetic process	3.03E-04
37	GO:0016120: carotene biosynthetic process	3.03E-04
38	GO:0016123: xanthophyll biosynthetic process	3.03E-04
39	GO:0010020: chloroplast fission	3.20E-04
40	GO:0010207: photosystem II assembly	3.20E-04
41	GO:0046855: inositol phosphate dephosphorylation	4.24E-04
42	GO:0042549: photosystem II stabilization	4.24E-04
43	GO:0010189: vitamin E biosynthetic process	5.63E-04
44	GO:0000481: maturation of 5S rRNA	6.28E-04
45	GO:0043953: protein transport by the Tat complex	6.28E-04
46	GO:0065002: intracellular protein transmembrane transport	6.28E-04
47	GO:0043686: co-translational protein modification	6.28E-04
48	GO:0033388: putrescine biosynthetic process from arginine	6.28E-04
49	GO:0006436: tryptophanyl-tRNA aminoacylation	6.28E-04
50	GO:0046167: glycerol-3-phosphate biosynthetic process	6.28E-04
51	GO:0071277: cellular response to calcium ion	6.28E-04
52	GO:0043007: maintenance of rDNA	6.28E-04
53	GO:0010028: xanthophyll cycle	6.28E-04
54	GO:0034337: RNA folding	6.28E-04
55	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	6.28E-04
56	GO:0006419: alanyl-tRNA aminoacylation	6.28E-04
57	GO:0000476: maturation of 4.5S rRNA	6.28E-04
58	GO:0009443: pyridoxal 5'-phosphate salvage	6.28E-04
59	GO:0000967: rRNA 5'-end processing	6.28E-04
60	GO:0031426: polycistronic mRNA processing	6.28E-04
61	GO:0009772: photosynthetic electron transport in photosystem II	7.20E-04
62	GO:0009645: response to low light intensity stimulus	7.20E-04
63	GO:0009637: response to blue light	8.62E-04
64	GO:0048564: photosystem I assembly	8.95E-04
65	GO:0009657: plastid organization	1.09E-03
66	GO:0000373: Group II intron splicing	1.30E-03
67	GO:0000256: allantoin catabolic process	1.35E-03
68	GO:0009446: putrescine biosynthetic process	1.35E-03
69	GO:0034755: iron ion transmembrane transport	1.35E-03
70	GO:0006435: threonyl-tRNA aminoacylation	1.35E-03
71	GO:0006650: glycerophospholipid metabolic process	1.35E-03
72	GO:0006729: tetrahydrobiopterin biosynthetic process	1.35E-03
73	GO:0006568: tryptophan metabolic process	1.35E-03
74	GO:0010024: phytochromobilin biosynthetic process	1.35E-03
75	GO:0080181: lateral root branching	1.35E-03
76	GO:0034470: ncRNA processing	1.35E-03
77	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.35E-03
78	GO:0009629: response to gravity	1.35E-03
79	GO:0080005: photosystem stoichiometry adjustment	1.35E-03
80	GO:0046741: transport of virus in host, tissue to tissue	1.35E-03
81	GO:0030187: melatonin biosynthetic process	1.35E-03
82	GO:0006432: phenylalanyl-tRNA aminoacylation	1.35E-03
83	GO:0018026: peptidyl-lysine monomethylation	1.35E-03
84	GO:0009793: embryo development ending in seed dormancy	1.73E-03
85	GO:0006364: rRNA processing	2.00E-03
86	GO:0046168: glycerol-3-phosphate catabolic process	2.23E-03
87	GO:0009405: pathogenesis	2.23E-03
88	GO:0071492: cellular response to UV-A	2.23E-03
89	GO:0006788: heme oxidation	2.23E-03
90	GO:0006013: mannose metabolic process	2.23E-03
91	GO:0002230: positive regulation of defense response to virus by host	2.23E-03
92	GO:1901672: positive regulation of systemic acquired resistance	2.23E-03
93	GO:0005977: glycogen metabolic process	2.23E-03
94	GO:0006954: inflammatory response	2.23E-03
95	GO:0010136: ureide catabolic process	2.23E-03
96	GO:0006790: sulfur compound metabolic process	2.39E-03
97	GO:0006094: gluconeogenesis	2.72E-03
98	GO:0009767: photosynthetic electron transport chain	2.72E-03
99	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.23E-03
100	GO:0006145: purine nucleobase catabolic process	3.23E-03
101	GO:0051016: barbed-end actin filament capping	3.23E-03
102	GO:0043572: plastid fission	3.23E-03
103	GO:0042989: sequestering of actin monomers	3.23E-03
104	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	3.23E-03
105	GO:2001141: regulation of RNA biosynthetic process	3.23E-03
106	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	3.23E-03
107	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	3.23E-03
108	GO:0006020: inositol metabolic process	3.23E-03
109	GO:0071484: cellular response to light intensity	3.23E-03
110	GO:0009102: biotin biosynthetic process	3.23E-03
111	GO:0009052: pentose-phosphate shunt, non-oxidative branch	3.23E-03
112	GO:0009650: UV protection	3.23E-03
113	GO:0010239: chloroplast mRNA processing	3.23E-03
114	GO:0046739: transport of virus in multicellular host	3.23E-03
115	GO:0006072: glycerol-3-phosphate metabolic process	3.23E-03
116	GO:0090307: mitotic spindle assembly	3.23E-03
117	GO:0016311: dephosphorylation	3.32E-03
118	GO:0046854: phosphatidylinositol phosphorylation	3.44E-03
119	GO:0019853: L-ascorbic acid biosynthetic process	3.44E-03
120	GO:0010218: response to far red light	4.01E-03
121	GO:0006221: pyrimidine nucleotide biosynthetic process	4.36E-03
122	GO:0010021: amylopectin biosynthetic process	4.36E-03
123	GO:0071486: cellular response to high light intensity	4.36E-03
124	GO:0031935: regulation of chromatin silencing	4.36E-03
125	GO:0031122: cytoplasmic microtubule organization	4.36E-03
126	GO:0015994: chlorophyll metabolic process	4.36E-03
127	GO:0007017: microtubule-based process	4.71E-03
128	GO:0006564: L-serine biosynthetic process	5.60E-03
129	GO:0034052: positive regulation of plant-type hypersensitive response	5.60E-03
130	GO:0031365: N-terminal protein amino acid modification	5.60E-03
131	GO:0006656: phosphatidylcholine biosynthetic process	5.60E-03
132	GO:0006282: regulation of DNA repair	5.60E-03
133	GO:0016558: protein import into peroxisome matrix	5.60E-03
134	GO:0030041: actin filament polymerization	5.60E-03
135	GO:0010117: photoprotection	5.60E-03
136	GO:0080167: response to karrikin	6.23E-03
137	GO:0009306: protein secretion	6.76E-03
138	GO:0009643: photosynthetic acclimation	6.95E-03
139	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.95E-03
140	GO:0006655: phosphatidylglycerol biosynthetic process	6.95E-03
141	GO:0042793: transcription from plastid promoter	6.95E-03
142	GO:0010190: cytochrome b6f complex assembly	6.95E-03
143	GO:0009117: nucleotide metabolic process	6.95E-03
144	GO:0008033: tRNA processing	7.93E-03
145	GO:1901259: chloroplast rRNA processing	8.41E-03
146	GO:0042372: phylloquinone biosynthetic process	8.41E-03
147	GO:0071470: cellular response to osmotic stress	8.41E-03
148	GO:0048280: vesicle fusion with Golgi apparatus	8.41E-03
149	GO:0055114: oxidation-reduction process	9.22E-03
150	GO:0009791: post-embryonic development	9.90E-03
151	GO:0008654: phospholipid biosynthetic process	9.90E-03
152	GO:0006400: tRNA modification	9.96E-03
153	GO:0010196: nonphotochemical quenching	9.96E-03
154	GO:0051510: regulation of unidimensional cell growth	9.96E-03
155	GO:0009769: photosynthesis, light harvesting in photosystem II	9.96E-03
156	GO:0006401: RNA catabolic process	9.96E-03
157	GO:0048528: post-embryonic root development	9.96E-03
158	GO:1900056: negative regulation of leaf senescence	9.96E-03
159	GO:0032259: methylation	1.14E-02
160	GO:0009704: de-etiolation	1.16E-02
161	GO:0032508: DNA duplex unwinding	1.16E-02
162	GO:0009642: response to light intensity	1.16E-02
163	GO:0031540: regulation of anthocyanin biosynthetic process	1.16E-02
164	GO:0042255: ribosome assembly	1.16E-02
165	GO:0006353: DNA-templated transcription, termination	1.16E-02
166	GO:0009231: riboflavin biosynthetic process	1.16E-02
167	GO:0016559: peroxisome fission	1.16E-02
168	GO:0006402: mRNA catabolic process	1.16E-02
169	GO:0030091: protein repair	1.16E-02
170	GO:0006605: protein targeting	1.16E-02
171	GO:0006096: glycolytic process	1.21E-02
172	GO:0032544: plastid translation	1.34E-02
173	GO:0017004: cytochrome complex assembly	1.34E-02
174	GO:0071482: cellular response to light stimulus	1.34E-02
175	GO:0006754: ATP biosynthetic process	1.52E-02
176	GO:0048507: meristem development	1.52E-02
177	GO:0098656: anion transmembrane transport	1.52E-02
178	GO:0009821: alkaloid biosynthetic process	1.52E-02
179	GO:0010206: photosystem II repair	1.52E-02
180	GO:0090333: regulation of stomatal closure	1.52E-02
181	GO:0006098: pentose-phosphate shunt	1.52E-02
182	GO:0042254: ribosome biogenesis	1.59E-02
183	GO:0010380: regulation of chlorophyll biosynthetic process	1.71E-02
184	GO:0031425: chloroplast RNA processing	1.71E-02
185	GO:0005982: starch metabolic process	1.71E-02
186	GO:1900426: positive regulation of defense response to bacterium	1.71E-02
187	GO:0010205: photoinhibition	1.71E-02
188	GO:0009638: phototropism	1.71E-02
189	GO:0005975: carbohydrate metabolic process	1.83E-02
190	GO:0055085: transmembrane transport	1.85E-02
191	GO:0006896: Golgi to vacuole transport	1.91E-02
192	GO:0006949: syncytium formation	1.91E-02
193	GO:0006259: DNA metabolic process	1.91E-02
194	GO:0006457: protein folding	1.92E-02
195	GO:0006879: cellular iron ion homeostasis	2.12E-02
196	GO:0006352: DNA-templated transcription, initiation	2.12E-02
197	GO:0018119: peptidyl-cysteine S-nitrosylation	2.12E-02
198	GO:0006415: translational termination	2.12E-02
199	GO:0019684: photosynthesis, light reaction	2.12E-02
200	GO:0006265: DNA topological change	2.12E-02
201	GO:0009089: lysine biosynthetic process via diaminopimelate	2.12E-02
202	GO:0072593: reactive oxygen species metabolic process	2.12E-02
203	GO:0005983: starch catabolic process	2.33E-02
204	GO:0016024: CDP-diacylglycerol biosynthetic process	2.33E-02
205	GO:0006006: glucose metabolic process	2.56E-02
206	GO:0006807: nitrogen compound metabolic process	2.56E-02
207	GO:0009725: response to hormone	2.56E-02
208	GO:0010628: positive regulation of gene expression	2.56E-02
209	GO:0019253: reductive pentose-phosphate cycle	2.79E-02
210	GO:0009735: response to cytokinin	2.81E-02
211	GO:0090351: seedling development	3.02E-02
212	GO:0009451: RNA modification	3.14E-02
213	GO:0006863: purine nucleobase transport	3.27E-02
214	GO:0006833: water transport	3.27E-02
215	GO:0009416: response to light stimulus	3.27E-02
216	GO:0009863: salicylic acid mediated signaling pathway	3.52E-02
217	GO:0007010: cytoskeleton organization	3.52E-02
218	GO:0080147: root hair cell development	3.52E-02
219	GO:0051302: regulation of cell division	3.77E-02
220	GO:0019953: sexual reproduction	3.77E-02
221	GO:0008299: isoprenoid biosynthetic process	3.77E-02
222	GO:0006418: tRNA aminoacylation for protein translation	3.77E-02
223	GO:0006281: DNA repair	3.78E-02
224	GO:0006810: transport	3.94E-02
225	GO:0048511: rhythmic process	4.03E-02
226	GO:0019915: lipid storage	4.03E-02
227	GO:0009269: response to desiccation	4.03E-02
228	GO:0080092: regulation of pollen tube growth	4.30E-02
229	GO:0006730: one-carbon metabolic process	4.30E-02
230	GO:0009411: response to UV	4.57E-02
231	GO:0006012: galactose metabolic process	4.57E-02
232	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.57E-02
233	GO:0010224: response to UV-B	4.59E-02
234	GO:0009561: megagametogenesis	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
2	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
3	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
4	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
5	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
6	GO:0050126: N-carbamoylputrescine amidase activity	0.00E+00
7	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
8	GO:0042623: ATPase activity, coupled	0.00E+00
9	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
10	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
11	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
12	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
13	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
14	GO:0004076: biotin synthase activity	0.00E+00
15	GO:0004059: aralkylamine N-acetyltransferase activity	0.00E+00
16	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
17	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
18	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
19	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
20	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
21	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
22	GO:0010276: phytol kinase activity	0.00E+00
23	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
24	GO:0016168: chlorophyll binding	6.54E-09
25	GO:0008934: inositol monophosphate 1-phosphatase activity	1.70E-05
26	GO:0052833: inositol monophosphate 4-phosphatase activity	1.70E-05
27	GO:0052832: inositol monophosphate 3-phosphatase activity	1.70E-05
28	GO:0031409: pigment binding	3.13E-05
29	GO:0070402: NADPH binding	5.62E-05
30	GO:0022891: substrate-specific transmembrane transporter activity	8.11E-05
31	GO:0043495: protein anchor	2.01E-04
32	GO:0051537: 2 iron, 2 sulfur cluster binding	2.60E-04
33	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.01E-04
34	GO:0004462: lactoylglutathione lyase activity	4.24E-04
35	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.63E-04
36	GO:0050308: sugar-phosphatase activity	6.28E-04
37	GO:0004813: alanine-tRNA ligase activity	6.28E-04
38	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	6.28E-04
39	GO:0004830: tryptophan-tRNA ligase activity	6.28E-04
40	GO:0047911: galacturan 1,4-alpha-galacturonidase activity	6.28E-04
41	GO:0042586: peptide deformylase activity	6.28E-04
42	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	6.28E-04
43	GO:0004654: polyribonucleotide nucleotidyltransferase activity	6.28E-04
44	GO:0010347: L-galactose-1-phosphate phosphatase activity	6.28E-04
45	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	6.28E-04
46	GO:0004347: glucose-6-phosphate isomerase activity	6.28E-04
47	GO:0004425: indole-3-glycerol-phosphate synthase activity	6.28E-04
48	GO:0004451: isocitrate lyase activity	6.28E-04
49	GO:0019203: carbohydrate phosphatase activity	6.28E-04
50	GO:0019899: enzyme binding	7.20E-04
51	GO:0004033: aldo-keto reductase (NADP) activity	8.95E-04
52	GO:0000234: phosphoethanolamine N-methyltransferase activity	1.35E-03
53	GO:0004826: phenylalanine-tRNA ligase activity	1.35E-03
54	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.35E-03
55	GO:0047746: chlorophyllase activity	1.35E-03
56	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.35E-03
57	GO:0004617: phosphoglycerate dehydrogenase activity	1.35E-03
58	GO:0016630: protochlorophyllide reductase activity	1.35E-03
59	GO:0004829: threonine-tRNA ligase activity	1.35E-03
60	GO:0019172: glyoxalase III activity	1.35E-03
61	GO:0019156: isoamylase activity	1.35E-03
62	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.35E-03
63	GO:0016491: oxidoreductase activity	2.07E-03
64	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.08E-03
65	GO:0003913: DNA photolyase activity	2.23E-03
66	GO:0004751: ribose-5-phosphate isomerase activity	2.23E-03
67	GO:0004148: dihydrolipoyl dehydrogenase activity	2.23E-03
68	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	2.23E-03
69	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.23E-03
70	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.23E-03
71	GO:0000049: tRNA binding	2.39E-03
72	GO:0031072: heat shock protein binding	2.72E-03
73	GO:0009041: uridylate kinase activity	3.23E-03
74	GO:0016851: magnesium chelatase activity	3.23E-03
75	GO:0035529: NADH pyrophosphatase activity	3.23E-03
76	GO:0016149: translation release factor activity, codon specific	3.23E-03
77	GO:0048027: mRNA 5'-UTR binding	3.23E-03
78	GO:0005528: FK506 binding	4.27E-03
79	GO:0004392: heme oxygenase (decyclizing) activity	4.36E-03
80	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.36E-03
81	GO:0004659: prenyltransferase activity	4.36E-03
82	GO:0016279: protein-lysine N-methyltransferase activity	4.36E-03
83	GO:0001053: plastid sigma factor activity	4.36E-03
84	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.36E-03
85	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	4.36E-03
86	GO:0008453: alanine-glyoxylate transaminase activity	4.36E-03
87	GO:0004045: aminoacyl-tRNA hydrolase activity	4.36E-03
88	GO:0016987: sigma factor activity	4.36E-03
89	GO:0043015: gamma-tubulin binding	4.36E-03
90	GO:0003746: translation elongation factor activity	4.80E-03
91	GO:0019843: rRNA binding	4.86E-03
92	GO:0003993: acid phosphatase activity	5.08E-03
93	GO:0003785: actin monomer binding	5.60E-03
94	GO:0003959: NADPH dehydrogenase activity	5.60E-03
95	GO:0051011: microtubule minus-end binding	5.60E-03
96	GO:0003727: single-stranded RNA binding	6.76E-03
97	GO:0000293: ferric-chelate reductase activity	6.95E-03
98	GO:0042578: phosphoric ester hydrolase activity	6.95E-03
99	GO:2001070: starch binding	6.95E-03
100	GO:0004605: phosphatidate cytidylyltransferase activity	6.95E-03
101	GO:0004332: fructose-bisphosphate aldolase activity	6.95E-03
102	GO:0004556: alpha-amylase activity	6.95E-03
103	GO:0016462: pyrophosphatase activity	6.95E-03
104	GO:0005198: structural molecule activity	7.72E-03
105	GO:0004559: alpha-mannosidase activity	8.41E-03
106	GO:0008195: phosphatidate phosphatase activity	8.41E-03
107	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	8.41E-03
108	GO:0015631: tubulin binding	8.41E-03
109	GO:0051287: NAD binding	8.49E-03
110	GO:0008080: N-acetyltransferase activity	8.56E-03
111	GO:0003723: RNA binding	9.11E-03
112	GO:0016853: isomerase activity	9.21E-03
113	GO:0009881: photoreceptor activity	9.96E-03
114	GO:0048038: quinone binding	1.06E-02
115	GO:0042802: identical protein binding	1.15E-02
116	GO:0043022: ribosome binding	1.16E-02
117	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.34E-02
118	GO:0008135: translation factor activity, RNA binding	1.34E-02
119	GO:0009055: electron carrier activity	1.39E-02
120	GO:0016597: amino acid binding	1.45E-02
121	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.52E-02
122	GO:0003747: translation release factor activity	1.52E-02
123	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.52E-02
124	GO:0016844: strictosidine synthase activity	1.71E-02
125	GO:0045309: protein phosphorylated amino acid binding	1.71E-02
126	GO:0005381: iron ion transmembrane transporter activity	1.71E-02
127	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.92E-02
128	GO:0019904: protein domain specific binding	2.12E-02
129	GO:0030145: manganese ion binding	2.33E-02
130	GO:0008565: protein transporter activity	2.55E-02
131	GO:0005315: inorganic phosphate transmembrane transporter activity	2.56E-02
132	GO:0004089: carbonate dehydratase activity	2.56E-02
133	GO:0008081: phosphoric diester hydrolase activity	2.56E-02
134	GO:0000175: 3'-5'-exoribonuclease activity	2.56E-02
135	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.79E-02
136	GO:0046872: metal ion binding	3.21E-02
137	GO:0043424: protein histidine kinase binding	3.77E-02
138	GO:0005345: purine nucleobase transmembrane transporter activity	3.77E-02
139	GO:0003924: GTPase activity	3.78E-02
140	GO:0004176: ATP-dependent peptidase activity	4.03E-02
141	GO:0004519: endonuclease activity	4.27E-02
142	GO:0008514: organic anion transmembrane transporter activity	4.85E-02
143	GO:0031625: ubiquitin protein ligase binding	4.91E-02
144	GO:0008168: methyltransferase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0009349: riboflavin synthase complex	0.00E+00
2	GO:0043235: receptor complex	0.00E+00
3	GO:0010368: chloroplast isoamylase complex	0.00E+00
4	GO:0009507: chloroplast	1.46E-86
5	GO:0009535: chloroplast thylakoid membrane	4.13E-48
6	GO:0009534: chloroplast thylakoid	1.45E-25
7	GO:0009570: chloroplast stroma	8.22E-24
8	GO:0009941: chloroplast envelope	6.35E-21
9	GO:0009579: thylakoid	3.43E-16
10	GO:0009543: chloroplast thylakoid lumen	2.23E-13
11	GO:0009523: photosystem II	7.40E-10
12	GO:0031977: thylakoid lumen	4.36E-09
13	GO:0010287: plastoglobule	2.67E-07
14	GO:0042651: thylakoid membrane	2.08E-06
15	GO:0009654: photosystem II oxygen evolving complex	4.75E-05
16	GO:0009538: photosystem I reaction center	4.83E-05
17	GO:0033281: TAT protein transport complex	5.62E-05
18	GO:0042644: chloroplast nucleoid	9.03E-05
19	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.03E-05
20	GO:0030286: dynein complex	2.01E-04
21	GO:0030095: chloroplast photosystem II	3.20E-04
22	GO:0030076: light-harvesting complex	3.73E-04
23	GO:0031969: chloroplast membrane	4.72E-04
24	GO:0009515: granal stacked thylakoid	6.28E-04
25	GO:0031361: integral component of thylakoid membrane	6.28E-04
26	GO:0009782: photosystem I antenna complex	6.28E-04
27	GO:0009533: chloroplast stromal thylakoid	7.20E-04
28	GO:0009706: chloroplast inner membrane	7.51E-04
29	GO:0009522: photosystem I	1.31E-03
30	GO:0008274: gamma-tubulin ring complex	1.35E-03
31	GO:0008290: F-actin capping protein complex	1.35E-03
32	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.35E-03
33	GO:0019898: extrinsic component of membrane	1.43E-03
34	GO:0009295: nucleoid	2.17E-03
35	GO:0005853: eukaryotic translation elongation factor 1 complex	2.23E-03
36	GO:0010007: magnesium chelatase complex	2.23E-03
37	GO:0009508: plastid chromosome	2.72E-03
38	GO:0000923: equatorial microtubule organizing center	3.23E-03
39	GO:0042646: plastid nucleoid	3.23E-03
40	GO:0009331: glycerol-3-phosphate dehydrogenase complex	3.23E-03
41	GO:0009517: PSII associated light-harvesting complex II	4.36E-03
42	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	4.36E-03
43	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	6.95E-03
44	GO:0016020: membrane	1.03E-02
45	GO:0009536: plastid	1.13E-02
46	GO:0012507: ER to Golgi transport vesicle membrane	1.16E-02
47	GO:0009539: photosystem II reaction center	1.34E-02
48	GO:0005778: peroxisomal membrane	1.37E-02
49	GO:0000922: spindle pole	1.52E-02
50	GO:0016324: apical plasma membrane	1.91E-02
51	GO:0009707: chloroplast outer membrane	2.02E-02
52	GO:0012511: monolayer-surrounded lipid storage body	2.12E-02
53	GO:0015934: large ribosomal subunit	2.33E-02
54	GO:0000311: plastid large ribosomal subunit	2.33E-02
55	GO:0032040: small-subunit processome	2.33E-02
56	GO:0005938: cell cortex	2.56E-02
57	GO:0005759: mitochondrial matrix	2.71E-02
58	GO:0005875: microtubule associated complex	3.27E-02
59	GO:0009532: plastid stroma	4.03E-02
60	GO:0015629: actin cytoskeleton	4.57E-02
61	GO:0005840: ribosome	4.77E-02