Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G05240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901679: nucleotide transmembrane transport8.18E-05
2GO:0031407: oxylipin metabolic process8.18E-05
3GO:0010289: homogalacturonan biosynthetic process8.18E-05
4GO:0031408: oxylipin biosynthetic process8.34E-05
5GO:0001944: vasculature development1.02E-04
6GO:0010288: response to lead ion1.42E-04
7GO:0080121: AMP transport1.42E-04
8GO:0015867: ATP transport2.85E-04
9GO:0010200: response to chitin3.93E-04
10GO:0006751: glutathione catabolic process4.48E-04
11GO:0015866: ADP transport4.48E-04
12GO:0035435: phosphate ion transmembrane transport4.48E-04
13GO:0047484: regulation of response to osmotic stress4.48E-04
14GO:0098655: cation transmembrane transport5.36E-04
15GO:1901001: negative regulation of response to salt stress5.36E-04
16GO:0045926: negative regulation of growth5.36E-04
17GO:0051707: response to other organism5.65E-04
18GO:2000070: regulation of response to water deprivation7.22E-04
19GO:0007155: cell adhesion7.22E-04
20GO:0009819: drought recovery7.22E-04
21GO:0009873: ethylene-activated signaling pathway8.44E-04
22GO:0098656: anion transmembrane transport9.20E-04
23GO:0006098: pentose-phosphate shunt9.20E-04
24GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay9.20E-04
25GO:2000280: regulation of root development1.02E-03
26GO:0055062: phosphate ion homeostasis1.13E-03
27GO:0030148: sphingolipid biosynthetic process1.24E-03
28GO:0009611: response to wounding1.28E-03
29GO:0009790: embryo development1.51E-03
30GO:0048467: gynoecium development1.60E-03
31GO:0070588: calcium ion transmembrane transport1.72E-03
32GO:0006470: protein dephosphorylation2.02E-03
33GO:0009695: jasmonic acid biosynthetic process2.12E-03
34GO:0048443: stamen development2.69E-03
35GO:0070417: cellular response to cold2.84E-03
36GO:0000271: polysaccharide biosynthetic process3.00E-03
37GO:0010501: RNA secondary structure unwinding3.00E-03
38GO:0000226: microtubule cytoskeleton organization3.00E-03
39GO:0045489: pectin biosynthetic process3.15E-03
40GO:0000302: response to reactive oxygen species3.63E-03
41GO:0010193: response to ozone3.63E-03
42GO:0051607: defense response to virus4.49E-03
43GO:0010029: regulation of seed germination4.85E-03
44GO:0048481: plant ovule development5.60E-03
45GO:0016051: carbohydrate biosynthetic process6.60E-03
46GO:0006839: mitochondrial transport7.22E-03
47GO:0009644: response to high light intensity8.31E-03
48GO:0000165: MAPK cascade8.99E-03
49GO:0051301: cell division9.54E-03
50GO:0009809: lignin biosynthetic process9.69E-03
51GO:0006364: rRNA processing9.69E-03
52GO:0055114: oxidation-reduction process1.01E-02
53GO:0006355: regulation of transcription, DNA-templated1.11E-02
54GO:0048367: shoot system development1.11E-02
55GO:0009620: response to fungus1.17E-02
56GO:0006351: transcription, DNA-templated1.19E-02
57GO:0009624: response to nematode1.24E-02
58GO:0000398: mRNA splicing, via spliceosome1.37E-02
59GO:0071555: cell wall organization1.78E-02
60GO:0010150: leaf senescence1.83E-02
61GO:0010228: vegetative to reproductive phase transition of meristem1.89E-02
62GO:0009739: response to gibberellin1.98E-02
63GO:0009733: response to auxin2.00E-02
64GO:0010468: regulation of gene expression2.07E-02
65GO:0006970: response to osmotic stress2.63E-02
66GO:0046686: response to cadmium ion2.77E-02
67GO:0032259: methylation3.72E-02
68GO:0009751: response to salicylic acid3.80E-02
69GO:0006629: lipid metabolic process3.84E-02
70GO:0048364: root development3.96E-02
RankGO TermAdjusted P value
1GO:0008419: RNA lariat debranching enzyme activity0.00E+00
2GO:0016629: 12-oxophytodienoate reductase activity7.18E-08
3GO:0052631: sphingolipid delta-8 desaturase activity3.25E-05
4GO:0001047: core promoter binding8.18E-05
5GO:0003839: gamma-glutamylcyclotransferase activity8.18E-05
6GO:0010181: FMN binding1.57E-04
7GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.65E-04
8GO:0080122: AMP transmembrane transporter activity3.65E-04
9GO:0004722: protein serine/threonine phosphatase activity5.32E-04
10GO:0005347: ATP transmembrane transporter activity5.36E-04
11GO:0015217: ADP transmembrane transporter activity5.36E-04
12GO:0016621: cinnamoyl-CoA reductase activity6.27E-04
13GO:0005262: calcium channel activity1.47E-03
14GO:0015114: phosphate ion transmembrane transporter activity1.47E-03
15GO:0004707: MAP kinase activity2.26E-03
16GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.40E-03
17GO:0004004: ATP-dependent RNA helicase activity5.22E-03
18GO:0008757: S-adenosylmethionine-dependent methyltransferase activity5.41E-03
19GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.19E-03
20GO:0016758: transferase activity, transferring hexosyl groups1.43E-02
21GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.48E-02
22GO:0043565: sequence-specific DNA binding2.39E-02
23GO:0008168: methyltransferase activity2.43E-02
24GO:0050660: flavin adenine dinucleotide binding2.77E-02
25GO:0004497: monooxygenase activity2.91E-02
26GO:0003700: transcription factor activity, sequence-specific DNA binding3.04E-02
27GO:0009055: electron carrier activity4.04E-02
RankGO TermAdjusted P value
1GO:0005743: mitochondrial inner membrane4.60E-03
2GO:0031225: anchored component of membrane1.37E-02
3GO:0046658: anchored component of plasma membrane2.23E-02
4GO:0000139: Golgi membrane2.41E-02
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Gene type



Gene DE type