GO Enrichment Analysis of Co-expressed Genes with
AT3G04840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006412: translation | 4.33E-47 |
| 2 | GO:0042254: ribosome biogenesis | 3.85E-15 |
| 3 | GO:0009955: adaxial/abaxial pattern specification | 8.84E-08 |
| 4 | GO:0009735: response to cytokinin | 5.58E-07 |
| 5 | GO:0000027: ribosomal large subunit assembly | 4.37E-06 |
| 6 | GO:1901349: glucosinolate transport | 7.07E-05 |
| 7 | GO:0090449: phloem glucosinolate loading | 7.07E-05 |
| 8 | GO:0006407: rRNA export from nucleus | 7.07E-05 |
| 9 | GO:1990542: mitochondrial transmembrane transport | 7.07E-05 |
| 10 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.07E-05 |
| 11 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.07E-05 |
| 12 | GO:0006820: anion transport | 1.07E-04 |
| 13 | GO:0006626: protein targeting to mitochondrion | 1.23E-04 |
| 14 | GO:0015786: UDP-glucose transport | 1.70E-04 |
| 15 | GO:0048569: post-embryonic animal organ development | 1.70E-04 |
| 16 | GO:1902626: assembly of large subunit precursor of preribosome | 2.86E-04 |
| 17 | GO:0002181: cytoplasmic translation | 2.86E-04 |
| 18 | GO:0015783: GDP-fucose transport | 2.86E-04 |
| 19 | GO:0042256: mature ribosome assembly | 2.86E-04 |
| 20 | GO:0006165: nucleoside diphosphate phosphorylation | 4.15E-04 |
| 21 | GO:0006228: UTP biosynthetic process | 4.15E-04 |
| 22 | GO:0006168: adenine salvage | 4.15E-04 |
| 23 | GO:0001676: long-chain fatty acid metabolic process | 4.15E-04 |
| 24 | GO:0046513: ceramide biosynthetic process | 4.15E-04 |
| 25 | GO:0006166: purine ribonucleoside salvage | 4.15E-04 |
| 26 | GO:0070301: cellular response to hydrogen peroxide | 4.15E-04 |
| 27 | GO:0006241: CTP biosynthetic process | 4.15E-04 |
| 28 | GO:0072334: UDP-galactose transmembrane transport | 4.15E-04 |
| 29 | GO:0042274: ribosomal small subunit biogenesis | 5.53E-04 |
| 30 | GO:0006183: GTP biosynthetic process | 5.53E-04 |
| 31 | GO:0036065: fucosylation | 7.00E-04 |
| 32 | GO:0044209: AMP salvage | 7.00E-04 |
| 33 | GO:0000470: maturation of LSU-rRNA | 8.57E-04 |
| 34 | GO:1901001: negative regulation of response to salt stress | 1.02E-03 |
| 35 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.19E-03 |
| 36 | GO:0009690: cytokinin metabolic process | 1.37E-03 |
| 37 | GO:0000028: ribosomal small subunit assembly | 1.37E-03 |
| 38 | GO:0008283: cell proliferation | 1.47E-03 |
| 39 | GO:0009965: leaf morphogenesis | 1.64E-03 |
| 40 | GO:0098656: anion transmembrane transport | 1.76E-03 |
| 41 | GO:0009245: lipid A biosynthetic process | 1.76E-03 |
| 42 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.97E-03 |
| 43 | GO:0006913: nucleocytoplasmic transport | 2.41E-03 |
| 44 | GO:0010015: root morphogenesis | 2.41E-03 |
| 45 | GO:0002237: response to molecule of bacterial origin | 3.12E-03 |
| 46 | GO:0009969: xyloglucan biosynthetic process | 3.37E-03 |
| 47 | GO:0030150: protein import into mitochondrial matrix | 3.89E-03 |
| 48 | GO:0009651: response to salt stress | 3.89E-03 |
| 49 | GO:0009116: nucleoside metabolic process | 3.89E-03 |
| 50 | GO:0046686: response to cadmium ion | 4.50E-03 |
| 51 | GO:0007005: mitochondrion organization | 4.73E-03 |
| 52 | GO:0040007: growth | 5.02E-03 |
| 53 | GO:0000413: protein peptidyl-prolyl isomerization | 5.93E-03 |
| 54 | GO:0009749: response to glucose | 6.89E-03 |
| 55 | GO:0010193: response to ozone | 7.22E-03 |
| 56 | GO:0009793: embryo development ending in seed dormancy | 8.20E-03 |
| 57 | GO:0009832: plant-type cell wall biogenesis | 1.17E-02 |
| 58 | GO:0006811: ion transport | 1.21E-02 |
| 59 | GO:0009853: photorespiration | 1.33E-02 |
| 60 | GO:0006631: fatty acid metabolic process | 1.50E-02 |
| 61 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.82E-02 |
| 62 | GO:0006364: rRNA processing | 1.97E-02 |
| 63 | GO:0006486: protein glycosylation | 1.97E-02 |
| 64 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.01E-02 |
| 65 | GO:0006857: oligopeptide transport | 2.06E-02 |
| 66 | GO:0006096: glycolytic process | 2.21E-02 |
| 67 | GO:0000398: mRNA splicing, via spliceosome | 2.80E-02 |
| 68 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.26E-02 |
| 69 | GO:0006633: fatty acid biosynthetic process | 3.49E-02 |
| 70 | GO:0016036: cellular response to phosphate starvation | 3.55E-02 |
| 71 | GO:0007623: circadian rhythm | 3.73E-02 |
| 72 | GO:0009617: response to bacterium | 4.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052873: FMN reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0008752: FMN reductase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 5.50E-53 |
| 4 | GO:0003729: mRNA binding | 8.78E-10 |
| 5 | GO:0019843: rRNA binding | 3.20E-08 |
| 6 | GO:0008097: 5S rRNA binding | 2.59E-06 |
| 7 | GO:0015288: porin activity | 3.30E-05 |
| 8 | GO:0008308: voltage-gated anion channel activity | 4.22E-05 |
| 9 | GO:0090448: glucosinolate:proton symporter activity | 7.07E-05 |
| 10 | GO:0050291: sphingosine N-acyltransferase activity | 1.70E-04 |
| 11 | GO:0004618: phosphoglycerate kinase activity | 1.70E-04 |
| 12 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.86E-04 |
| 13 | GO:0005457: GDP-fucose transmembrane transporter activity | 2.86E-04 |
| 14 | GO:0003999: adenine phosphoribosyltransferase activity | 4.15E-04 |
| 15 | GO:0005460: UDP-glucose transmembrane transporter activity | 4.15E-04 |
| 16 | GO:0004550: nucleoside diphosphate kinase activity | 4.15E-04 |
| 17 | GO:0017077: oxidative phosphorylation uncoupler activity | 4.15E-04 |
| 18 | GO:0005459: UDP-galactose transmembrane transporter activity | 7.00E-04 |
| 19 | GO:0031177: phosphopantetheine binding | 8.57E-04 |
| 20 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.18E-04 |
| 21 | GO:0102391: decanoate--CoA ligase activity | 1.02E-03 |
| 22 | GO:0000035: acyl binding | 1.02E-03 |
| 23 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.19E-03 |
| 24 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 1.19E-03 |
| 25 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.19E-03 |
| 26 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.37E-03 |
| 27 | GO:0008417: fucosyltransferase activity | 1.76E-03 |
| 28 | GO:0015266: protein channel activity | 2.88E-03 |
| 29 | GO:0004298: threonine-type endopeptidase activity | 4.44E-03 |
| 30 | GO:0008514: organic anion transmembrane transporter activity | 5.32E-03 |
| 31 | GO:0010181: FMN binding | 6.56E-03 |
| 32 | GO:0005515: protein binding | 1.24E-02 |
| 33 | GO:0050897: cobalt ion binding | 1.25E-02 |
| 34 | GO:0003746: translation elongation factor activity | 1.33E-02 |
| 35 | GO:0003993: acid phosphatase activity | 1.37E-02 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.77E-02 |
| 37 | GO:0046872: metal ion binding | 1.82E-02 |
| 38 | GO:0000166: nucleotide binding | 2.40E-02 |
| 39 | GO:0003723: RNA binding | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0022626: cytosolic ribosome | 5.70E-41 |
| 2 | GO:0022625: cytosolic large ribosomal subunit | 2.75E-29 |
| 3 | GO:0005840: ribosome | 3.94E-29 |
| 4 | GO:0022627: cytosolic small ribosomal subunit | 5.06E-29 |
| 5 | GO:0009506: plasmodesma | 3.46E-17 |
| 6 | GO:0005829: cytosol | 1.69E-16 |
| 7 | GO:0015934: large ribosomal subunit | 7.19E-14 |
| 8 | GO:0005774: vacuolar membrane | 2.73E-11 |
| 9 | GO:0005730: nucleolus | 9.86E-11 |
| 10 | GO:0005737: cytoplasm | 1.79E-09 |
| 11 | GO:0016020: membrane | 1.47E-08 |
| 12 | GO:0005773: vacuole | 4.79E-06 |
| 13 | GO:0005618: cell wall | 1.14E-05 |
| 14 | GO:0005886: plasma membrane | 1.64E-05 |
| 15 | GO:0046930: pore complex | 4.22E-05 |
| 16 | GO:0030686: 90S preribosome | 7.07E-05 |
| 17 | GO:0009507: chloroplast | 1.75E-04 |
| 18 | GO:0005741: mitochondrial outer membrane | 2.46E-04 |
| 19 | GO:0046861: glyoxysomal membrane | 2.86E-04 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 1.56E-03 |
| 21 | GO:0009514: glyoxysome | 1.56E-03 |
| 22 | GO:0005743: mitochondrial inner membrane | 1.97E-03 |
| 23 | GO:0019013: viral nucleocapsid | 2.88E-03 |
| 24 | GO:0005750: mitochondrial respiratory chain complex III | 3.12E-03 |
| 25 | GO:0005758: mitochondrial intermembrane space | 3.89E-03 |
| 26 | GO:0070469: respiratory chain | 4.17E-03 |
| 27 | GO:0015935: small ribosomal subunit | 4.44E-03 |
| 28 | GO:0005839: proteasome core complex | 4.44E-03 |
| 29 | GO:0032580: Golgi cisterna membrane | 8.25E-03 |
| 30 | GO:0005794: Golgi apparatus | 9.80E-03 |
| 31 | GO:0000502: proteasome complex | 1.97E-02 |
| 32 | GO:0005681: spliceosomal complex | 2.21E-02 |
| 33 | GO:0005834: heterotrimeric G-protein complex | 2.32E-02 |
| 34 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.69E-02 |
| 35 | GO:0005777: peroxisome | 2.76E-02 |
| 36 | GO:0005759: mitochondrial matrix | 3.49E-02 |
| 37 | GO:0005783: endoplasmic reticulum | 4.23E-02 |
| 38 | GO:0005622: intracellular | 4.25E-02 |