Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G04210

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009583: detection of light stimulus0.00E+00
2GO:0071000: response to magnetism0.00E+00
3GO:0072387: flavin adenine dinucleotide metabolic process1.21E-06
4GO:0010343: singlet oxygen-mediated programmed cell death3.46E-06
5GO:1901529: positive regulation of anion channel activity3.46E-06
6GO:0010617: circadian regulation of calcium ion oscillation3.46E-06
7GO:0099402: plant organ development3.46E-06
8GO:1902448: positive regulation of shade avoidance6.60E-06
9GO:1901672: positive regulation of systemic acquired resistance6.60E-06
10GO:1901332: negative regulation of lateral root development1.06E-05
11GO:1902347: response to strigolactone1.52E-05
12GO:0010375: stomatal complex patterning2.06E-05
13GO:0010117: photoprotection2.06E-05
14GO:0046283: anthocyanin-containing compound metabolic process2.06E-05
15GO:1901371: regulation of leaf morphogenesis2.65E-05
16GO:0060918: auxin transport2.65E-05
17GO:0010310: regulation of hydrogen peroxide metabolic process3.30E-05
18GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.30E-05
19GO:0051510: regulation of unidimensional cell growth3.99E-05
20GO:0010928: regulation of auxin mediated signaling pathway4.74E-05
21GO:1900426: positive regulation of defense response to bacterium7.20E-05
22GO:0009638: phototropism7.20E-05
23GO:0010075: regulation of meristem growth1.10E-04
24GO:0009785: blue light signaling pathway1.10E-04
25GO:2000377: regulation of reactive oxygen species metabolic process1.52E-04
26GO:0010118: stomatal movement2.34E-04
27GO:0009958: positive gravitropism2.47E-04
28GO:0042752: regulation of circadian rhythm2.59E-04
29GO:0009646: response to absence of light2.59E-04
30GO:0007264: small GTPase mediated signal transduction2.97E-04
31GO:0018298: protein-chromophore linkage4.34E-04
32GO:0010218: response to far red light4.63E-04
33GO:0009637: response to blue light5.07E-04
34GO:0010114: response to red light5.98E-04
35GO:0009640: photomorphogenesis5.98E-04
36GO:0009644: response to high light intensity6.29E-04
37GO:0007623: circadian rhythm1.29E-03
38GO:0006470: protein dephosphorylation1.41E-03
39GO:0046777: protein autophosphorylation2.07E-03
40GO:0009734: auxin-activated signaling pathway3.24E-03
41GO:0009416: response to light stimulus3.79E-03
42GO:0009414: response to water deprivation6.06E-03
43GO:0005975: carbohydrate metabolic process8.23E-03
44GO:0007275: multicellular organism development9.88E-03
45GO:0009737: response to abscisic acid1.04E-02
46GO:0006952: defense response2.06E-02
RankGO TermAdjusted P value
1GO:0033947: mannosylglycoprotein endo-beta-mannosidase activity0.00E+00
2GO:0019003: GDP binding6.60E-06
3GO:0009882: blue light photoreceptor activity1.06E-05
4GO:0071949: FAD binding6.35E-05
5GO:0001055: RNA polymerase II activity7.20E-05
6GO:0001054: RNA polymerase I activity9.04E-05
7GO:0001056: RNA polymerase III activity9.99E-05
8GO:0004712: protein serine/threonine/tyrosine kinase activity5.37E-04
9GO:0003899: DNA-directed 5'-3' RNA polymerase activity7.24E-04
10GO:0042802: identical protein binding1.51E-03
11GO:0042803: protein homodimerization activity2.31E-03
12GO:0004722: protein serine/threonine phosphatase activity2.38E-03
13GO:0003924: GTPase activity2.57E-03
14GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.59E-03
15GO:0005525: GTP binding5.34E-03
16GO:0016301: kinase activity5.53E-03
17GO:0004672: protein kinase activity8.05E-03
18GO:0046872: metal ion binding1.21E-02
19GO:0005524: ATP binding2.79E-02
20GO:0005515: protein binding3.73E-02
RankGO TermAdjusted P value
1GO:0030427: site of polarized growth0.00E+00
2GO:0016605: PML body6.60E-06
3GO:0016604: nuclear body7.20E-05
4GO:0000419: DNA-directed RNA polymerase V complex1.41E-04
5GO:0005819: spindle5.37E-04
6GO:0005886: plasma membrane5.62E-04
7GO:0005730: nucleolus8.88E-03
8GO:0005773: vacuole2.00E-02
9GO:0005737: cytoplasm2.91E-02
10GO:0009506: plasmodesma3.85E-02
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Gene type



Gene DE type