Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G03190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042820: vitamin B6 catabolic process0.00E+00
2GO:0042821: pyridoxal biosynthetic process0.00E+00
3GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
4GO:0019761: glucosinolate biosynthetic process1.20E-08
5GO:0048564: photosystem I assembly4.70E-06
6GO:0033506: glucosinolate biosynthetic process from homomethionine2.08E-05
7GO:1904966: positive regulation of vitamin E biosynthetic process2.08E-05
8GO:1904964: positive regulation of phytol biosynthetic process2.08E-05
9GO:0009081: branched-chain amino acid metabolic process2.08E-05
10GO:0071277: cellular response to calcium ion2.08E-05
11GO:0009443: pyridoxal 5'-phosphate salvage2.08E-05
12GO:0000256: allantoin catabolic process5.37E-05
13GO:1902326: positive regulation of chlorophyll biosynthetic process5.37E-05
14GO:2000030: regulation of response to red or far red light5.37E-05
15GO:0019752: carboxylic acid metabolic process5.37E-05
16GO:0009625: response to insect5.43E-05
17GO:0010136: ureide catabolic process9.50E-05
18GO:0090391: granum assembly9.50E-05
19GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.42E-04
20GO:0009067: aspartate family amino acid biosynthetic process1.42E-04
21GO:0006145: purine nucleobase catabolic process1.42E-04
22GO:0009755: hormone-mediated signaling pathway1.95E-04
23GO:0010438: cellular response to sulfur starvation2.51E-04
24GO:0009643: photosynthetic acclimation3.11E-04
25GO:0009088: threonine biosynthetic process3.73E-04
26GO:0031930: mitochondria-nucleus signaling pathway3.73E-04
27GO:0009704: de-etiolation5.05E-04
28GO:2000070: regulation of response to water deprivation5.05E-04
29GO:0009819: drought recovery5.05E-04
30GO:0009642: response to light intensity5.05E-04
31GO:0010439: regulation of glucosinolate biosynthetic process5.05E-04
32GO:0009611: response to wounding6.40E-04
33GO:0090333: regulation of stomatal closure6.45E-04
34GO:0000373: Group II intron splicing6.45E-04
35GO:0009821: alkaloid biosynthetic process6.45E-04
36GO:0009098: leucine biosynthetic process7.18E-04
37GO:0006949: syncytium formation7.94E-04
38GO:0009682: induced systemic resistance8.71E-04
39GO:0009089: lysine biosynthetic process via diaminopimelate8.71E-04
40GO:0010105: negative regulation of ethylene-activated signaling pathway9.50E-04
41GO:0006006: glucose metabolic process1.03E-03
42GO:0009767: photosynthetic electron transport chain1.03E-03
43GO:0019253: reductive pentose-phosphate cycle1.11E-03
44GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.76E-03
45GO:0006814: sodium ion transport2.28E-03
46GO:0009828: plant-type cell wall loosening2.85E-03
47GO:0009753: response to jasmonic acid3.05E-03
48GO:0015995: chlorophyll biosynthetic process3.58E-03
49GO:0018298: protein-chromophore linkage3.84E-03
50GO:0009817: defense response to fungus, incompatible interaction3.84E-03
51GO:0009407: toxin catabolic process4.10E-03
52GO:0007568: aging4.24E-03
53GO:0009867: jasmonic acid mediated signaling pathway4.51E-03
54GO:0009416: response to light stimulus5.01E-03
55GO:0009644: response to high light intensity5.66E-03
56GO:0009636: response to toxic substance5.81E-03
57GO:0009664: plant-type cell wall organization6.27E-03
58GO:0006096: glycolytic process7.40E-03
59GO:0009414: response to water deprivation9.91E-03
60GO:0009058: biosynthetic process1.02E-02
61GO:0055114: oxidation-reduction process1.11E-02
62GO:0040008: regulation of growth1.20E-02
63GO:0009739: response to gibberellin1.34E-02
64GO:0009617: response to bacterium1.40E-02
65GO:0009826: unidimensional cell growth1.64E-02
66GO:0009658: chloroplast organization1.68E-02
67GO:0080167: response to karrikin1.96E-02
68GO:0015979: photosynthesis2.16E-02
69GO:0009793: embryo development ending in seed dormancy2.36E-02
70GO:0032259: methylation2.51E-02
71GO:0009751: response to salicylic acid2.56E-02
72GO:0008152: metabolic process2.78E-02
73GO:0009873: ethylene-activated signaling pathway3.11E-02
74GO:0006357: regulation of transcription from RNA polymerase II promoter3.16E-02
75GO:0009735: response to cytokinin3.66E-02
76GO:0055085: transmembrane transport4.62E-02
RankGO TermAdjusted P value
1GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
2GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
3GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
4GO:0019899: enzyme binding3.49E-06
5GO:0080105: 6-methylthiopropyl glucosinolate S-oxygenase activity2.08E-05
6GO:0016784: 3-mercaptopyruvate sulfurtransferase activity2.08E-05
7GO:0004451: isocitrate lyase activity2.08E-05
8GO:0010177: 2-(2'-methylthio)ethylmalate synthase activity2.08E-05
9GO:0003862: 3-isopropylmalate dehydrogenase activity5.37E-05
10GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity5.37E-05
11GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity5.37E-05
12GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity5.37E-05
13GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity5.37E-05
14GO:0010326: methionine-oxo-acid transaminase activity5.37E-05
15GO:0070402: NADPH binding9.50E-05
16GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor9.50E-05
17GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity9.50E-05
18GO:0004792: thiosulfate sulfurtransferase activity1.42E-04
19GO:0008508: bile acid:sodium symporter activity1.42E-04
20GO:0004072: aspartate kinase activity1.42E-04
21GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity1.42E-04
22GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1.95E-04
23GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.95E-04
24GO:0004084: branched-chain-amino-acid transaminase activity1.95E-04
25GO:0043495: protein anchor1.95E-04
26GO:0050661: NADP binding2.89E-04
27GO:0051287: NAD binding3.96E-04
28GO:0004033: aldo-keto reductase (NADP) activity5.05E-04
29GO:0016844: strictosidine synthase activity7.18E-04
30GO:0022891: substrate-specific transmembrane transporter activity1.76E-03
31GO:0004499: N,N-dimethylaniline monooxygenase activity1.86E-03
32GO:0048038: quinone binding2.50E-03
33GO:0016597: amino acid binding3.08E-03
34GO:0016168: chlorophyll binding3.33E-03
35GO:0004364: glutathione transferase activity5.22E-03
36GO:0051537: 2 iron, 2 sulfur cluster binding5.66E-03
37GO:0003824: catalytic activity1.11E-02
38GO:0042802: identical protein binding1.46E-02
39GO:0000287: magnesium ion binding1.66E-02
40GO:0050660: flavin adenine dinucleotide binding1.87E-02
41GO:0004497: monooxygenase activity1.96E-02
42GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.23E-02
43GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.41E-02
44GO:0009055: electron carrier activity2.72E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.36E-14
2GO:0009535: chloroplast thylakoid membrane2.83E-11
3GO:0009570: chloroplast stroma1.41E-06
4GO:0009534: chloroplast thylakoid8.06E-05
5GO:0009941: chloroplast envelope4.19E-04
6GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.45E-04
7GO:0009543: chloroplast thylakoid lumen7.66E-04
8GO:0009579: thylakoid7.77E-04
9GO:0030095: chloroplast photosystem II1.11E-03
10GO:0009654: photosystem II oxygen evolving complex1.47E-03
11GO:0042651: thylakoid membrane1.47E-03
12GO:0009523: photosystem II2.39E-03
13GO:0019898: extrinsic component of membrane2.39E-03
14GO:0031977: thylakoid lumen5.07E-03
15GO:0009536: plastid1.25E-02
16GO:0009505: plant-type cell wall1.27E-02
17GO:0031969: chloroplast membrane1.96E-02
18GO:0048046: apoplast3.70E-02
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Gene type



Gene DE type