Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G03180

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:0009583: detection of light stimulus0.00E+00
3GO:0010190: cytochrome b6f complex assembly2.89E-06
4GO:1900426: positive regulation of defense response to bacterium1.62E-05
5GO:0071806: protein transmembrane transport2.88E-05
6GO:0072387: flavin adenine dinucleotide metabolic process2.88E-05
7GO:0048438: floral whorl development2.88E-05
8GO:0010617: circadian regulation of calcium ion oscillation7.28E-05
9GO:0099402: plant organ development7.28E-05
10GO:0080185: effector dependent induction by symbiont of host immune response7.28E-05
11GO:0010343: singlet oxygen-mediated programmed cell death7.28E-05
12GO:1901529: positive regulation of anion channel activity7.28E-05
13GO:1901672: positive regulation of systemic acquired resistance1.27E-04
14GO:0006954: inflammatory response1.27E-04
15GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation1.27E-04
16GO:1902448: positive regulation of shade avoidance1.27E-04
17GO:1901332: negative regulation of lateral root development1.89E-04
18GO:1902347: response to strigolactone2.57E-04
19GO:0031935: regulation of chromatin silencing2.57E-04
20GO:0010117: photoprotection3.30E-04
21GO:0046283: anthocyanin-containing compound metabolic process3.30E-04
22GO:0007568: aging3.47E-04
23GO:0009910: negative regulation of flower development3.47E-04
24GO:1901371: regulation of leaf morphogenesis4.06E-04
25GO:0060918: auxin transport4.06E-04
26GO:0016070: RNA metabolic process4.06E-04
27GO:0031053: primary miRNA processing4.06E-04
28GO:0010076: maintenance of floral meristem identity4.86E-04
29GO:0010310: regulation of hydrogen peroxide metabolic process4.86E-04
30GO:0010244: response to low fluence blue light stimulus by blue low-fluence system4.86E-04
31GO:0080111: DNA demethylation5.68E-04
32GO:0051510: regulation of unidimensional cell growth5.68E-04
33GO:1900056: negative regulation of leaf senescence5.68E-04
34GO:0030091: protein repair6.55E-04
35GO:0006605: protein targeting6.55E-04
36GO:0048564: photosystem I assembly6.55E-04
37GO:0045292: mRNA cis splicing, via spliceosome6.55E-04
38GO:0010380: regulation of chlorophyll biosynthetic process9.29E-04
39GO:0009638: phototropism9.29E-04
40GO:0045036: protein targeting to chloroplast1.03E-03
41GO:0010582: floral meristem determinacy1.23E-03
42GO:0009785: blue light signaling pathway1.34E-03
43GO:0010075: regulation of meristem growth1.34E-03
44GO:0009266: response to temperature stimulus1.45E-03
45GO:0090351: seedling development1.56E-03
46GO:2000377: regulation of reactive oxygen species metabolic process1.79E-03
47GO:0007017: microtubule-based process1.92E-03
48GO:0016226: iron-sulfur cluster assembly2.17E-03
49GO:0009658: chloroplast organization2.34E-03
50GO:0006284: base-excision repair2.43E-03
51GO:0010118: stomatal movement2.70E-03
52GO:0042752: regulation of circadian rhythm2.99E-03
53GO:0009646: response to absence of light2.99E-03
54GO:0009791: post-embryonic development3.13E-03
55GO:0006464: cellular protein modification process3.73E-03
56GO:0009816: defense response to bacterium, incompatible interaction4.37E-03
57GO:0006950: response to stress4.71E-03
58GO:0018298: protein-chromophore linkage5.05E-03
59GO:0006811: ion transport5.40E-03
60GO:0010218: response to far red light5.40E-03
61GO:0009637: response to blue light5.94E-03
62GO:0009640: photomorphogenesis7.08E-03
63GO:0008283: cell proliferation7.08E-03
64GO:0010114: response to red light7.08E-03
65GO:0051707: response to other organism7.08E-03
66GO:0009644: response to high light intensity7.48E-03
67GO:0000165: MAPK cascade8.09E-03
68GO:0000398: mRNA splicing, via spliceosome1.23E-02
69GO:0009845: seed germination1.38E-02
70GO:0007623: circadian rhythm1.64E-02
71GO:0010228: vegetative to reproductive phase transition of meristem1.70E-02
72GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.12E-02
73GO:0048366: leaf development2.52E-02
74GO:0046777: protein autophosphorylation2.74E-02
75GO:0045892: negative regulation of transcription, DNA-templated3.00E-02
76GO:0032259: methylation3.34E-02
77GO:0009751: response to salicylic acid3.41E-02
78GO:0006281: DNA repair3.45E-02
RankGO TermAdjusted P value
1GO:0071949: FAD binding1.30E-05
2GO:0030941: chloroplast targeting sequence binding2.88E-05
3GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity2.88E-05
4GO:0000900: translation repressor activity, nucleic acid binding1.27E-04
5GO:0004180: carboxypeptidase activity1.27E-04
6GO:0032947: protein complex scaffold1.27E-04
7GO:0000339: RNA cap binding1.89E-04
8GO:0009882: blue light photoreceptor activity1.89E-04
9GO:0051861: glycolipid binding2.57E-04
10GO:0004129: cytochrome-c oxidase activity1.13E-03
11GO:0031072: heat shock protein binding1.34E-03
12GO:0009982: pseudouridine synthase activity1.34E-03
13GO:0051536: iron-sulfur cluster binding1.79E-03
14GO:0003713: transcription coactivator activity2.84E-03
15GO:0008080: N-acetyltransferase activity2.84E-03
16GO:0016491: oxidoreductase activity3.52E-03
17GO:0008236: serine-type peptidase activity4.88E-03
18GO:0005515: protein binding5.51E-03
19GO:0005198: structural molecule activity7.68E-03
20GO:0003723: RNA binding8.70E-03
21GO:0031625: ubiquitin protein ligase binding9.36E-03
22GO:0003777: microtubule motor activity9.36E-03
23GO:0051082: unfolded protein binding1.12E-02
24GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.43E-02
25GO:0008017: microtubule binding1.70E-02
26GO:0042802: identical protein binding1.95E-02
27GO:0008168: methyltransferase activity2.18E-02
28GO:0061630: ubiquitin protein ligase activity2.71E-02
29GO:0042803: protein homodimerization activity3.07E-02
30GO:0016787: hydrolase activity3.27E-02
RankGO TermAdjusted P value
1GO:0005845: mRNA cap binding complex2.88E-05
2GO:0009507: chloroplast5.77E-05
3GO:0005846: nuclear cap binding complex7.28E-05
4GO:0016605: PML body1.27E-04
5GO:0009528: plastid inner membrane1.27E-04
6GO:0030286: dynein complex2.57E-04
7GO:0031359: integral component of chloroplast outer membrane5.68E-04
8GO:0000123: histone acetyltransferase complex5.68E-04
9GO:0046930: pore complex7.44E-04
10GO:0016604: nuclear body9.29E-04
11GO:0005875: microtubule associated complex1.67E-03
12GO:0042651: thylakoid membrane1.92E-03
13GO:0009707: chloroplast outer membrane5.05E-03
14GO:0031966: mitochondrial membrane8.29E-03
15GO:0009941: chloroplast envelope1.77E-02
16GO:0005737: cytoplasm2.17E-02
17GO:0031969: chloroplast membrane2.61E-02
18GO:0009535: chloroplast thylakoid membrane3.42E-02
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Gene type



Gene DE type