co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
2	GO:0018293: protein-FAD linkage	0.00E+00
3	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
4	GO:0009902: chloroplast relocation	1.33E-05
5	GO:0009903: chloroplast avoidance movement	4.63E-05
6	GO:0006520: cellular amino acid metabolic process	4.98E-05
7	GO:1902265: abscisic acid homeostasis	1.25E-04
8	GO:0048438: floral whorl development	1.25E-04
9	GO:0006567: threonine catabolic process	1.25E-04
10	GO:0000103: sulfate assimilation	1.79E-04
11	GO:0009637: response to blue light	2.44E-04
12	GO:0006099: tricarboxylic acid cycle	2.59E-04
13	GO:0006006: glucose metabolic process	2.77E-04
14	GO:0019388: galactose catabolic process	2.90E-04
15	GO:0007154: cell communication	2.90E-04
16	GO:0010220: positive regulation of vernalization response	2.90E-04
17	GO:0019441: tryptophan catabolic process to kynurenine	2.90E-04
18	GO:0080183: response to photooxidative stress	2.90E-04
19	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	2.90E-04
20	GO:0043100: pyrimidine nucleobase salvage	2.90E-04
21	GO:1901562: response to paraquat	4.78E-04
22	GO:0071492: cellular response to UV-A	4.78E-04
23	GO:0044375: regulation of peroxisome size	4.78E-04
24	GO:0016570: histone modification	4.78E-04
25	GO:0031022: nuclear migration along microfilament	4.78E-04
26	GO:0019419: sulfate reduction	4.78E-04
27	GO:0009585: red, far-red light phototransduction	5.03E-04
28	GO:0051603: proteolysis involved in cellular protein catabolic process	5.26E-04
29	GO:0009963: positive regulation of flavonoid biosynthetic process	6.85E-04
30	GO:0009647: skotomorphogenesis	6.85E-04
31	GO:0009113: purine nucleobase biosynthetic process	6.85E-04
32	GO:0009590: detection of gravity	6.85E-04
33	GO:1902476: chloride transmembrane transport	6.85E-04
34	GO:0042391: regulation of membrane potential	7.93E-04
35	GO:0006221: pyrimidine nucleotide biosynthetic process	9.08E-04
36	GO:0009649: entrainment of circadian clock	9.08E-04
37	GO:0032366: intracellular sterol transport	9.08E-04
38	GO:0044205: 'de novo' UMP biosynthetic process	9.08E-04
39	GO:0034613: cellular protein localization	9.08E-04
40	GO:0006646: phosphatidylethanolamine biosynthetic process	9.08E-04
41	GO:0006545: glycine biosynthetic process	9.08E-04
42	GO:0071486: cellular response to high light intensity	9.08E-04
43	GO:0009765: photosynthesis, light harvesting	9.08E-04
44	GO:0005975: carbohydrate metabolic process	1.00E-03
45	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.04E-03
46	GO:0046283: anthocyanin-containing compound metabolic process	1.15E-03
47	GO:0009904: chloroplast accumulation movement	1.15E-03
48	GO:0010236: plastoquinone biosynthetic process	1.15E-03
49	GO:0006508: proteolysis	1.19E-03
50	GO:0000060: protein import into nucleus, translocation	1.41E-03
51	GO:0006796: phosphate-containing compound metabolic process	1.41E-03
52	GO:0009117: nucleotide metabolic process	1.41E-03
53	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.41E-03
54	GO:0006555: methionine metabolic process	1.41E-03
55	GO:0070814: hydrogen sulfide biosynthetic process	1.41E-03
56	GO:0010076: maintenance of floral meristem identity	1.68E-03
57	GO:0010077: maintenance of inflorescence meristem identity	1.68E-03
58	GO:0019509: L-methionine salvage from methylthioadenosine	1.68E-03
59	GO:0009396: folic acid-containing compound biosynthetic process	1.98E-03
60	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.98E-03
61	GO:0006821: chloride transport	1.98E-03
62	GO:0050790: regulation of catalytic activity	1.98E-03
63	GO:0006368: transcription elongation from RNA polymerase II promoter	1.98E-03
64	GO:0005978: glycogen biosynthetic process	2.29E-03
65	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.29E-03
66	GO:0030091: protein repair	2.29E-03
67	GO:0009231: riboflavin biosynthetic process	2.29E-03
68	GO:0006102: isocitrate metabolic process	2.29E-03
69	GO:0016559: peroxisome fission	2.29E-03
70	GO:0015996: chlorophyll catabolic process	2.61E-03
71	GO:0009880: embryonic pattern specification	2.61E-03
72	GO:0055114: oxidation-reduction process	2.93E-03
73	GO:0035999: tetrahydrofolate interconversion	3.31E-03
74	GO:0009970: cellular response to sulfate starvation	3.68E-03
75	GO:0045036: protein targeting to chloroplast	3.68E-03
76	GO:0009641: shade avoidance	3.68E-03
77	GO:0052544: defense response by callose deposition in cell wall	4.06E-03
78	GO:0000272: polysaccharide catabolic process	4.06E-03
79	GO:0018119: peptidyl-cysteine S-nitrosylation	4.06E-03
80	GO:0048229: gametophyte development	4.06E-03
81	GO:0010582: floral meristem determinacy	4.45E-03
82	GO:0009691: cytokinin biosynthetic process	4.86E-03
83	GO:0030048: actin filament-based movement	4.86E-03
84	GO:0006108: malate metabolic process	4.86E-03
85	GO:0050826: response to freezing	4.86E-03
86	GO:0009718: anthocyanin-containing compound biosynthetic process	4.86E-03
87	GO:0019853: L-ascorbic acid biosynthetic process	5.71E-03
88	GO:0007031: peroxisome organization	5.71E-03
89	GO:0051017: actin filament bundle assembly	6.61E-03
90	GO:0019344: cysteine biosynthetic process	6.61E-03
91	GO:0008299: isoprenoid biosynthetic process	7.08E-03
92	GO:0019915: lipid storage	7.56E-03
93	GO:0009058: biosynthetic process	7.86E-03
94	GO:0009693: ethylene biosynthetic process	8.56E-03
95	GO:0040007: growth	8.56E-03
96	GO:0006012: galactose metabolic process	8.56E-03
97	GO:0080022: primary root development	1.01E-02
98	GO:0010051: xylem and phloem pattern formation	1.01E-02
99	GO:0019252: starch biosynthetic process	1.18E-02
100	GO:0008654: phospholipid biosynthetic process	1.18E-02
101	GO:0009409: response to cold	1.19E-02
102	GO:0035556: intracellular signal transduction	1.28E-02
103	GO:1901657: glycosyl compound metabolic process	1.36E-02
104	GO:0006464: cellular protein modification process	1.42E-02
105	GO:0045893: positive regulation of transcription, DNA-templated	1.42E-02
106	GO:0016125: sterol metabolic process	1.42E-02
107	GO:0046686: response to cadmium ion	1.46E-02
108	GO:0010029: regulation of seed germination	1.67E-02
109	GO:0006970: response to osmotic stress	1.72E-02
110	GO:0010411: xyloglucan metabolic process	1.81E-02
111	GO:0048573: photoperiodism, flowering	1.81E-02
112	GO:0080167: response to karrikin	1.99E-02
113	GO:0009407: toxin catabolic process	2.08E-02
114	GO:0010119: regulation of stomatal movement	2.15E-02
115	GO:0045454: cell redox homeostasis	2.38E-02
116	GO:0006468: protein phosphorylation	2.39E-02
117	GO:0006631: fatty acid metabolic process	2.60E-02
118	GO:0009640: photomorphogenesis	2.75E-02
119	GO:0016042: lipid catabolic process	2.85E-02
120	GO:0009636: response to toxic substance	2.99E-02
121	GO:0000165: MAPK cascade	3.15E-02
122	GO:0008152: metabolic process	3.23E-02
123	GO:0010224: response to UV-B	3.49E-02
124	GO:0006952: defense response	3.53E-02
125	GO:0009909: regulation of flower development	3.66E-02
126	GO:0009626: plant-type hypersensitive response	4.01E-02
127	GO:0009620: response to fungus	4.10E-02

Rank	GO Term	Adjusted P value
1	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
2	GO:0004151: dihydroorotase activity	0.00E+00
3	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
4	GO:0047504: (-)-menthol dehydrogenase activity	0.00E+00
5	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
6	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
7	GO:0047501: (+)-neomenthol dehydrogenase activity	0.00E+00
8	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
9	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
10	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
11	GO:0008106: alcohol dehydrogenase (NADP+) activity	7.04E-06
12	GO:0042802: identical protein binding	3.25E-05
13	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	3.28E-05
14	GO:0005261: cation channel activity	4.63E-05
15	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.25E-04
16	GO:0009671: nitrate:proton symporter activity	1.25E-04
17	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	1.25E-04
18	GO:0080047: GDP-L-galactose phosphorylase activity	1.25E-04
19	GO:0004793: threonine aldolase activity	1.25E-04
20	GO:0004307: ethanolaminephosphotransferase activity	1.25E-04
21	GO:0008732: L-allo-threonine aldolase activity	1.25E-04
22	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	1.25E-04
23	GO:0080048: GDP-D-glucose phosphorylase activity	1.25E-04
24	GO:0046480: galactolipid galactosyltransferase activity	1.25E-04
25	GO:0080079: cellobiose glucosidase activity	1.25E-04
26	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	1.25E-04
27	GO:0008236: serine-type peptidase activity	1.63E-04
28	GO:0030572: phosphatidyltransferase activity	2.90E-04
29	GO:0004142: diacylglycerol cholinephosphotransferase activity	2.90E-04
30	GO:0009973: adenylyl-sulfate reductase activity	2.90E-04
31	GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding	2.90E-04
32	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	2.90E-04
33	GO:0004061: arylformamidase activity	2.90E-04
34	GO:0004614: phosphoglucomutase activity	2.90E-04
35	GO:0004329: formate-tetrahydrofolate ligase activity	2.90E-04
36	GO:0004450: isocitrate dehydrogenase (NADP+) activity	2.90E-04
37	GO:0016868: intramolecular transferase activity, phosphotransferases	2.90E-04
38	GO:0043425: bHLH transcription factor binding	2.90E-04
39	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	2.90E-04
40	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	2.90E-04
41	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	2.90E-04
42	GO:0050347: trans-octaprenyltranstransferase activity	2.90E-04
43	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	2.90E-04
44	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	2.90E-04
45	GO:0004185: serine-type carboxypeptidase activity	3.42E-04
46	GO:0030552: cAMP binding	3.52E-04
47	GO:0030553: cGMP binding	3.52E-04
48	GO:0004557: alpha-galactosidase activity	4.78E-04
49	GO:0003935: GTP cyclohydrolase II activity	4.78E-04
50	GO:0004781: sulfate adenylyltransferase (ATP) activity	4.78E-04
51	GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding	4.78E-04
52	GO:0052692: raffinose alpha-galactosidase activity	4.78E-04
53	GO:0004180: carboxypeptidase activity	4.78E-04
54	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	4.78E-04
55	GO:0010277: chlorophyllide a oxygenase [overall] activity	4.78E-04
56	GO:0005216: ion channel activity	4.81E-04
57	GO:0035529: NADH pyrophosphatase activity	6.85E-04
58	GO:0030551: cyclic nucleotide binding	7.93E-04
59	GO:0005249: voltage-gated potassium channel activity	7.93E-04
60	GO:0005253: anion channel activity	9.08E-04
61	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.15E-03
62	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.41E-03
63	GO:0005247: voltage-gated chloride channel activity	1.41E-03
64	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.41E-03
65	GO:0016161: beta-amylase activity	1.68E-03
66	GO:0030060: L-malate dehydrogenase activity	1.68E-03
67	GO:0005085: guanyl-nucleotide exchange factor activity	1.98E-03
68	GO:0004427: inorganic diphosphatase activity	1.98E-03
69	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.29E-03
70	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	2.29E-03
71	GO:0004034: aldose 1-epimerase activity	2.29E-03
72	GO:0000287: magnesium ion binding	2.61E-03
73	GO:0016491: oxidoreductase activity	2.98E-03
74	GO:0004672: protein kinase activity	3.61E-03
75	GO:0008378: galactosyltransferase activity	4.45E-03
76	GO:0008234: cysteine-type peptidase activity	4.64E-03
77	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.28E-03
78	GO:0016787: hydrolase activity	6.98E-03
79	GO:0008324: cation transmembrane transporter activity	7.08E-03
80	GO:0030170: pyridoxal phosphate binding	8.28E-03
81	GO:0016853: isomerase activity	1.12E-02
82	GO:0048038: quinone binding	1.24E-02
83	GO:0004197: cysteine-type endopeptidase activity	1.30E-02
84	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.36E-02
85	GO:0008483: transaminase activity	1.48E-02
86	GO:0016413: O-acetyltransferase activity	1.54E-02
87	GO:0016788: hydrolase activity, acting on ester bonds	1.63E-02
88	GO:0016168: chlorophyll binding	1.67E-02
89	GO:0030247: polysaccharide binding	1.81E-02
90	GO:0052689: carboxylic ester hydrolase activity	2.19E-02
91	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.30E-02
92	GO:0008422: beta-glucosidase activity	2.45E-02
93	GO:0042803: protein homodimerization activity	2.49E-02
94	GO:0004871: signal transducer activity	2.49E-02
95	GO:0004364: glutathione transferase activity	2.68E-02
96	GO:0051537: 2 iron, 2 sulfur cluster binding	2.91E-02
97	GO:0051287: NAD binding	3.15E-02
98	GO:0016298: lipase activity	3.49E-02
99	GO:0022857: transmembrane transporter activity	4.19E-02
100	GO:0015035: protein disulfide oxidoreductase activity	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0000152: nuclear ubiquitin ligase complex	1.25E-04
2	GO:0005764: lysosome	3.14E-04
3	GO:0005773: vacuole	4.03E-04
4	GO:0009526: plastid envelope	9.08E-04
5	GO:0016593: Cdc73/Paf1 complex	9.08E-04
6	GO:0010319: stromule	1.32E-03
7	GO:0034707: chloride channel complex	1.41E-03
8	GO:0009507: chloroplast	1.93E-03
9	GO:0031359: integral component of chloroplast outer membrane	1.98E-03
10	GO:0005829: cytosol	2.15E-03
11	GO:0009501: amyloplast	2.29E-03
12	GO:0005779: integral component of peroxisomal membrane	2.61E-03
13	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.95E-03
14	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.00E-03
15	GO:0016604: nuclear body	3.31E-03
16	GO:0005884: actin filament	4.06E-03
17	GO:0005834: heterotrimeric G-protein complex	5.28E-03
18	GO:0005623: cell	7.66E-03
19	GO:0005759: mitochondrial matrix	9.37E-03
20	GO:0009505: plant-type cell wall	1.05E-02
21	GO:0009523: photosystem II	1.18E-02
22	GO:0005778: peroxisomal membrane	1.48E-02
23	GO:0048046: apoplast	1.74E-02
24	GO:0009570: chloroplast stroma	1.75E-02
25	GO:0009707: chloroplast outer membrane	1.94E-02
26	GO:0005783: endoplasmic reticulum	1.97E-02
27	GO:0031969: chloroplast membrane	1.99E-02
28	GO:0009536: plastid	3.74E-02
29	GO:0005747: mitochondrial respiratory chain complex I	3.92E-02
30	GO:0005887: integral component of plasma membrane	3.97E-02
31	GO:0009706: chloroplast inner membrane	4.37E-02
32	GO:0010287: plastoglobule	4.94E-02