Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018293: protein-FAD linkage0.00E+00
2GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
3GO:0032780: negative regulation of ATPase activity0.00E+00
4GO:0006720: isoprenoid metabolic process0.00E+00
5GO:0006120: mitochondrial electron transport, NADH to ubiquinone7.88E-08
6GO:0009853: photorespiration2.35E-06
7GO:0019509: L-methionine salvage from methylthioadenosine1.69E-05
8GO:0055114: oxidation-reduction process4.42E-05
9GO:0016487: farnesol metabolic process6.74E-05
10GO:0006099: tricarboxylic acid cycle7.94E-05
11GO:0006760: folic acid-containing compound metabolic process2.75E-04
12GO:0008654: phospholipid biosynthetic process4.39E-04
13GO:0000003: reproduction5.32E-04
14GO:0006646: phosphatidylethanolamine biosynthetic process5.32E-04
15GO:0006555: methionine metabolic process8.23E-04
16GO:0006121: mitochondrial electron transport, succinate to ubiquinone8.23E-04
17GO:0007035: vacuolar acidification8.23E-04
18GO:1901001: negative regulation of response to salt stress9.79E-04
19GO:0022904: respiratory electron transport chain1.14E-03
20GO:0050790: regulation of catalytic activity1.14E-03
21GO:0009396: folic acid-containing compound biosynthetic process1.14E-03
22GO:0030001: metal ion transport1.23E-03
23GO:0022900: electron transport chain1.50E-03
24GO:0046916: cellular transition metal ion homeostasis1.69E-03
25GO:0006754: ATP biosynthetic process1.69E-03
26GO:0035999: tetrahydrofolate interconversion1.89E-03
27GO:0000103: sulfate assimilation2.10E-03
28GO:0009691: cytokinin biosynthetic process2.76E-03
29GO:0006829: zinc II ion transport2.76E-03
30GO:0048440: carpel development2.99E-03
31GO:0009116: nucleoside metabolic process3.73E-03
32GO:2000377: regulation of reactive oxygen species metabolic process3.73E-03
33GO:0006825: copper ion transport3.99E-03
34GO:0010431: seed maturation4.26E-03
35GO:0061077: chaperone-mediated protein folding4.26E-03
36GO:0015992: proton transport4.26E-03
37GO:0035556: intracellular signal transduction4.41E-03
38GO:0016226: iron-sulfur cluster assembly4.53E-03
39GO:0001944: vasculature development4.81E-03
40GO:0015991: ATP hydrolysis coupled proton transport5.68E-03
41GO:0080022: primary root development5.68E-03
42GO:0006520: cellular amino acid metabolic process5.98E-03
43GO:0006662: glycerol ether metabolic process5.98E-03
44GO:0015986: ATP synthesis coupled proton transport6.28E-03
45GO:0006970: response to osmotic stress7.44E-03
46GO:0006499: N-terminal protein myristoylation1.15E-02
47GO:0009407: toxin catabolic process1.15E-02
48GO:0048527: lateral root development1.19E-02
49GO:0010043: response to zinc ion1.19E-02
50GO:0016042: lipid catabolic process1.23E-02
51GO:0009651: response to salt stress1.31E-02
52GO:0034599: cellular response to oxidative stress1.31E-02
53GO:0008152: metabolic process1.40E-02
54GO:0009636: response to toxic substance1.65E-02
55GO:0042538: hyperosmotic salinity response1.79E-02
56GO:0051603: proteolysis involved in cellular protein catabolic process1.93E-02
57GO:0009735: response to cytokinin2.06E-02
58GO:0009555: pollen development2.26E-02
59GO:0018105: peptidyl-serine phosphorylation2.47E-02
60GO:0009058: biosynthetic process2.94E-02
61GO:0010150: leaf senescence3.57E-02
62GO:0006979: response to oxidative stress4.58E-02
RankGO TermAdjusted P value
1GO:0052668: farnesol kinase activity0.00E+00
2GO:0047504: (-)-menthol dehydrogenase activity0.00E+00
3GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity0.00E+00
4GO:0052671: geranylgeraniol kinase activity0.00E+00
5GO:0047501: (+)-neomenthol dehydrogenase activity0.00E+00
6GO:0042030: ATPase inhibitor activity0.00E+00
7GO:0052670: geraniol kinase activity0.00E+00
8GO:0008137: NADH dehydrogenase (ubiquinone) activity3.24E-07
9GO:0008930: methylthioadenosine nucleosidase activity6.74E-05
10GO:0004307: ethanolaminephosphotransferase activity6.74E-05
11GO:0016776: phosphotransferase activity, phosphate group as acceptor6.74E-05
12GO:0019707: protein-cysteine S-acyltransferase activity6.74E-05
13GO:0016780: phosphotransferase activity, for other substituted phosphate groups6.74E-05
14GO:0008782: adenosylhomocysteine nucleosidase activity6.74E-05
15GO:0008802: betaine-aldehyde dehydrogenase activity6.74E-05
16GO:0030572: phosphatidyltransferase activity1.62E-04
17GO:0004142: diacylglycerol cholinephosphotransferase activity1.62E-04
18GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity2.75E-04
19GO:0008106: alcohol dehydrogenase (NADP+) activity3.98E-04
20GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor5.32E-04
21GO:0008177: succinate dehydrogenase (ubiquinone) activity6.73E-04
22GO:0016651: oxidoreductase activity, acting on NAD(P)H6.73E-04
23GO:0005496: steroid binding6.73E-04
24GO:0004605: phosphatidate cytidylyltransferase activity8.23E-04
25GO:0004029: aldehyde dehydrogenase (NAD) activity8.23E-04
26GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity8.23E-04
27GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity8.23E-04
28GO:0070300: phosphatidic acid binding9.79E-04
29GO:0050897: cobalt ion binding9.93E-04
30GO:0008121: ubiquinol-cytochrome-c reductase activity1.14E-03
31GO:0008320: protein transmembrane transporter activity1.14E-03
32GO:0015078: hydrogen ion transmembrane transporter activity1.50E-03
33GO:0046914: transition metal ion binding1.50E-03
34GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.60E-03
35GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.89E-03
36GO:0046961: proton-transporting ATPase activity, rotational mechanism2.31E-03
37GO:0005528: FK506 binding3.73E-03
38GO:0051536: iron-sulfur cluster binding3.73E-03
39GO:0047134: protein-disulfide reductase activity5.38E-03
40GO:0046933: proton-transporting ATP synthase activity, rotational mechanism5.98E-03
41GO:0046873: metal ion transmembrane transporter activity5.98E-03
42GO:0004791: thioredoxin-disulfide reductase activity6.28E-03
43GO:0016853: isomerase activity6.28E-03
44GO:0005507: copper ion binding6.44E-03
45GO:0016788: hydrolase activity, acting on ester bonds7.04E-03
46GO:0004197: cysteine-type endopeptidase activity7.24E-03
47GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.57E-03
48GO:0016597: amino acid binding8.59E-03
49GO:0052689: carboxylic ester hydrolase activity9.47E-03
50GO:0009931: calcium-dependent protein serine/threonine kinase activity9.65E-03
51GO:0004683: calmodulin-dependent protein kinase activity1.00E-02
52GO:0042803: protein homodimerization activity1.08E-02
53GO:0003824: catalytic activity1.13E-02
54GO:0051539: 4 iron, 4 sulfur cluster binding1.39E-02
55GO:0016491: oxidoreductase activity1.43E-02
56GO:0004364: glutathione transferase activity1.48E-02
57GO:0004672: protein kinase activity1.64E-02
58GO:0005198: structural molecule activity1.65E-02
59GO:0016298: lipase activity1.93E-02
60GO:0008234: cysteine-type peptidase activity2.02E-02
61GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.17E-02
62GO:0015035: protein disulfide oxidoreductase activity2.47E-02
63GO:0004386: helicase activity2.57E-02
64GO:0016787: hydrolase activity2.64E-02
65GO:0030170: pyridoxal phosphate binding3.05E-02
66GO:0005506: iron ion binding4.48E-02
RankGO TermAdjusted P value
1GO:0005747: mitochondrial respiratory chain complex I3.33E-16
2GO:0045271: respiratory chain complex I4.68E-06
3GO:0045273: respiratory chain complex II3.06E-05
4GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)3.06E-05
5GO:0005753: mitochondrial proton-transporting ATP synthase complex1.49E-04
6GO:0031966: mitochondrial membrane1.50E-04
7GO:0005758: mitochondrial intermembrane space1.88E-04
8GO:0005829: cytosol2.00E-04
9GO:0005739: mitochondrion2.29E-04
10GO:0033179: proton-transporting V-type ATPase, V0 domain5.32E-04
11GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)5.32E-04
12GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain6.73E-04
13GO:0005746: mitochondrial respiratory chain6.73E-04
14GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)8.23E-04
15GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane1.14E-03
16GO:0009501: amyloplast1.32E-03
17GO:0005764: lysosome2.99E-03
18GO:0005750: mitochondrial respiratory chain complex III2.99E-03
19GO:0070469: respiratory chain3.99E-03
20GO:0000785: chromatin7.24E-03
21GO:0005773: vacuole7.74E-03
22GO:0032580: Golgi cisterna membrane7.90E-03
23GO:0010319: stromule8.24E-03
24GO:0031969: chloroplast membrane8.57E-03
25GO:0005788: endoplasmic reticulum lumen9.29E-03
26GO:0005783: endoplasmic reticulum1.25E-02
27GO:0016020: membrane1.59E-02
28GO:0016607: nuclear speck2.17E-02
29GO:0009507: chloroplast2.18E-02
30GO:0012505: endomembrane system2.37E-02
31GO:0009543: chloroplast thylakoid lumen2.84E-02
32GO:0005759: mitochondrial matrix3.33E-02
33GO:0005615: extracellular space3.86E-02
34GO:0005774: vacuolar membrane4.76E-02
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Gene type



Gene DE type