co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
2	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
3	GO:0006593: ornithine catabolic process	0.00E+00
4	GO:0070207: protein homotrimerization	0.00E+00
5	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
6	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
7	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
8	GO:0009853: photorespiration	1.00E-05
9	GO:0080144: amino acid homeostasis	1.05E-04
10	GO:0031468: nuclear envelope reassembly	1.12E-04
11	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	1.12E-04
12	GO:0009852: auxin catabolic process	1.12E-04
13	GO:0015812: gamma-aminobutyric acid transport	1.12E-04
14	GO:0019544: arginine catabolic process to glutamate	1.12E-04
15	GO:0006148: inosine catabolic process	1.12E-04
16	GO:0016042: lipid catabolic process	1.25E-04
17	GO:0006807: nitrogen compound metabolic process	2.36E-04
18	GO:0006108: malate metabolic process	2.36E-04
19	GO:0006006: glucose metabolic process	2.36E-04
20	GO:0006631: fatty acid metabolic process	2.50E-04
21	GO:0009915: phloem sucrose loading	2.61E-04
22	GO:0016560: protein import into peroxisome matrix, docking	2.61E-04
23	GO:0080026: response to indolebutyric acid	2.61E-04
24	GO:0051603: proteolysis involved in cellular protein catabolic process	4.31E-04
25	GO:0051646: mitochondrion localization	4.32E-04
26	GO:0045793: positive regulation of cell size	4.32E-04
27	GO:0006760: folic acid-containing compound metabolic process	4.32E-04
28	GO:0009626: plant-type hypersensitive response	5.53E-04
29	GO:0006107: oxaloacetate metabolic process	6.19E-04
30	GO:0006241: CTP biosynthetic process	6.19E-04
31	GO:0006165: nucleoside diphosphate phosphorylation	6.19E-04
32	GO:0006228: UTP biosynthetic process	6.19E-04
33	GO:0080024: indolebutyric acid metabolic process	6.19E-04
34	GO:0032877: positive regulation of DNA endoreduplication	6.19E-04
35	GO:0005975: carbohydrate metabolic process	7.32E-04
36	GO:0051781: positive regulation of cell division	8.23E-04
37	GO:0006183: GTP biosynthetic process	8.23E-04
38	GO:0010363: regulation of plant-type hypersensitive response	8.23E-04
39	GO:0006221: pyrimidine nucleotide biosynthetic process	8.23E-04
40	GO:0006625: protein targeting to peroxisome	8.23E-04
41	GO:0008295: spermidine biosynthetic process	8.23E-04
42	GO:0032366: intracellular sterol transport	8.23E-04
43	GO:0044205: 'de novo' UMP biosynthetic process	8.23E-04
44	GO:0006646: phosphatidylethanolamine biosynthetic process	8.23E-04
45	GO:1902183: regulation of shoot apical meristem development	1.04E-03
46	GO:0009697: salicylic acid biosynthetic process	1.04E-03
47	GO:0042732: D-xylose metabolic process	1.27E-03
48	GO:0006561: proline biosynthetic process	1.27E-03
49	GO:0009816: defense response to bacterium, incompatible interaction	1.35E-03
50	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.52E-03
51	GO:0010189: vitamin E biosynthetic process	1.52E-03
52	GO:0055114: oxidation-reduction process	1.76E-03
53	GO:0006826: iron ion transport	1.78E-03
54	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.78E-03
55	GO:0032880: regulation of protein localization	1.78E-03
56	GO:0010043: response to zinc ion	1.91E-03
57	GO:0000028: ribosomal small subunit assembly	2.06E-03
58	GO:0048658: anther wall tapetum development	2.06E-03
59	GO:0009231: riboflavin biosynthetic process	2.06E-03
60	GO:0015996: chlorophyll catabolic process	2.35E-03
61	GO:0015780: nucleotide-sugar transport	2.66E-03
62	GO:0098656: anion transmembrane transport	2.66E-03
63	GO:0006098: pentose-phosphate shunt	2.66E-03
64	GO:0009060: aerobic respiration	2.66E-03
65	GO:0006810: transport	2.73E-03
66	GO:0009636: response to toxic substance	3.00E-03
67	GO:0006511: ubiquitin-dependent protein catabolic process	3.22E-03
68	GO:0009651: response to salt stress	3.49E-03
69	GO:0009684: indoleacetic acid biosynthetic process	3.65E-03
70	GO:0052544: defense response by callose deposition in cell wall	3.65E-03
71	GO:0006820: anion transport	4.00E-03
72	GO:0002213: defense response to insect	4.00E-03
73	GO:0009725: response to hormone	4.36E-03
74	GO:0010102: lateral root morphogenesis	4.36E-03
75	GO:0009691: cytokinin biosynthetic process	4.36E-03
76	GO:0050826: response to freezing	4.36E-03
77	GO:0009266: response to temperature stimulus	4.74E-03
78	GO:0007031: peroxisome organization	5.13E-03
79	GO:0007030: Golgi organization	5.13E-03
80	GO:0009901: anther dehiscence	5.13E-03
81	GO:0019853: L-ascorbic acid biosynthetic process	5.13E-03
82	GO:0010039: response to iron ion	5.13E-03
83	GO:0008152: metabolic process	5.33E-03
84	GO:0019762: glucosinolate catabolic process	5.52E-03
85	GO:0006636: unsaturated fatty acid biosynthetic process	5.52E-03
86	GO:2000377: regulation of reactive oxygen species metabolic process	5.93E-03
87	GO:0048511: rhythmic process	6.78E-03
88	GO:0061077: chaperone-mediated protein folding	6.78E-03
89	GO:0003333: amino acid transmembrane transport	6.78E-03
90	GO:0019748: secondary metabolic process	7.22E-03
91	GO:0016226: iron-sulfur cluster assembly	7.22E-03
92	GO:0080092: regulation of pollen tube growth	7.22E-03
93	GO:0006012: galactose metabolic process	7.67E-03
94	GO:0010584: pollen exine formation	8.13E-03
95	GO:0015991: ATP hydrolysis coupled proton transport	9.08E-03
96	GO:0042391: regulation of membrane potential	9.08E-03
97	GO:0080022: primary root development	9.08E-03
98	GO:0034220: ion transmembrane transport	9.08E-03
99	GO:0010154: fruit development	9.57E-03
100	GO:0061025: membrane fusion	1.01E-02
101	GO:0008654: phospholipid biosynthetic process	1.06E-02
102	GO:0009630: gravitropism	1.16E-02
103	GO:1901657: glycosyl compound metabolic process	1.22E-02
104	GO:0016125: sterol metabolic process	1.27E-02
105	GO:0010252: auxin homeostasis	1.27E-02
106	GO:0000910: cytokinesis	1.38E-02
107	GO:0010029: regulation of seed germination	1.50E-02
108	GO:0008219: cell death	1.74E-02
109	GO:0048767: root hair elongation	1.80E-02
110	GO:0009407: toxin catabolic process	1.86E-02
111	GO:0006099: tricarboxylic acid cycle	2.12E-02
112	GO:0006839: mitochondrial transport	2.25E-02
113	GO:0042742: defense response to bacterium	2.38E-02
114	GO:0008643: carbohydrate transport	2.60E-02
115	GO:0031347: regulation of defense response	2.82E-02
116	GO:0042538: hyperosmotic salinity response	2.89E-02
117	GO:0009909: regulation of flower development	3.27E-02
118	GO:0006096: glycolytic process	3.43E-02
119	GO:0009409: response to cold	3.47E-02
120	GO:0009735: response to cytokinin	4.05E-02
121	GO:0051726: regulation of cell cycle	4.08E-02
122	GO:0046686: response to cadmium ion	4.13E-02
123	GO:0009611: response to wounding	4.52E-02
124	GO:0009058: biosynthetic process	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
2	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
3	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
4	GO:0009045: xylose isomerase activity	0.00E+00
5	GO:0050152: omega-amidase activity	0.00E+00
6	GO:0004746: riboflavin synthase activity	0.00E+00
7	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
8	GO:0004151: dihydroorotase activity	0.00E+00
9	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
10	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
11	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
12	GO:0015391: nucleobase:cation symporter activity	0.00E+00
13	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
14	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
15	GO:0004056: argininosuccinate lyase activity	0.00E+00
16	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
17	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
18	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
19	GO:0004298: threonine-type endopeptidase activity	2.85E-07
20	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.09E-05
21	GO:0016788: hydrolase activity, acting on ester bonds	3.72E-05
22	GO:0052689: carboxylic ester hydrolase activity	7.20E-05
23	GO:0080048: GDP-D-glucose phosphorylase activity	1.12E-04
24	GO:0046480: galactolipid galactosyltransferase activity	1.12E-04
25	GO:0080079: cellobiose glucosidase activity	1.12E-04
26	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.12E-04
27	GO:0070401: NADP+ binding	1.12E-04
28	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	1.12E-04
29	GO:0080047: GDP-L-galactose phosphorylase activity	1.12E-04
30	GO:0045437: uridine nucleosidase activity	1.12E-04
31	GO:0004307: ethanolaminephosphotransferase activity	1.12E-04
32	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.12E-04
33	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	1.12E-04
34	GO:0016229: steroid dehydrogenase activity	1.12E-04
35	GO:0004047: aminomethyltransferase activity	2.61E-04
36	GO:0047724: inosine nucleosidase activity	2.61E-04
37	GO:0004766: spermidine synthase activity	2.61E-04
38	GO:0030572: phosphatidyltransferase activity	2.61E-04
39	GO:0004142: diacylglycerol cholinephosphotransferase activity	2.61E-04
40	GO:0080109: indole-3-acetonitrile nitrile hydratase activity	2.61E-04
41	GO:0052692: raffinose alpha-galactosidase activity	4.32E-04
42	GO:0010277: chlorophyllide a oxygenase [overall] activity	4.32E-04
43	GO:0004557: alpha-galactosidase activity	4.32E-04
44	GO:0080061: indole-3-acetonitrile nitrilase activity	4.32E-04
45	GO:0035251: UDP-glucosyltransferase activity	4.53E-04
46	GO:0008233: peptidase activity	4.61E-04
47	GO:0022857: transmembrane transporter activity	5.98E-04
48	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	6.19E-04
49	GO:0000257: nitrilase activity	6.19E-04
50	GO:0004550: nucleoside diphosphate kinase activity	6.19E-04
51	GO:0005507: copper ion binding	7.56E-04
52	GO:0010011: auxin binding	8.23E-04
53	GO:0050302: indole-3-acetaldehyde oxidase activity	8.23E-04
54	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	8.23E-04
55	GO:0004301: epoxide hydrolase activity	8.23E-04
56	GO:0004659: prenyltransferase activity	8.23E-04
57	GO:0005496: steroid binding	1.04E-03
58	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.27E-03
59	GO:0051117: ATPase binding	1.27E-03
60	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.27E-03
61	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.27E-03
62	GO:0016615: malate dehydrogenase activity	1.27E-03
63	GO:0030060: L-malate dehydrogenase activity	1.52E-03
64	GO:0005261: cation channel activity	1.52E-03
65	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.52E-03
66	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.78E-03
67	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.78E-03
68	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.78E-03
69	GO:0005085: guanyl-nucleotide exchange factor activity	1.78E-03
70	GO:0015288: porin activity	2.06E-03
71	GO:0004034: aldose 1-epimerase activity	2.06E-03
72	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.06E-03
73	GO:0004033: aldo-keto reductase (NADP) activity	2.06E-03
74	GO:0008422: beta-glucosidase activity	2.27E-03
75	GO:0008308: voltage-gated anion channel activity	2.35E-03
76	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.11E-03
77	GO:0004129: cytochrome-c oxidase activity	3.65E-03
78	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.65E-03
79	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.65E-03
80	GO:0008559: xenobiotic-transporting ATPase activity	3.65E-03
81	GO:0016298: lipase activity	3.72E-03
82	GO:0008378: galactosyltransferase activity	4.00E-03
83	GO:0004089: carbonate dehydratase activity	4.36E-03
84	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.38E-03
85	GO:0030552: cAMP binding	5.13E-03
86	GO:0004867: serine-type endopeptidase inhibitor activity	5.13E-03
87	GO:0030553: cGMP binding	5.13E-03
88	GO:0016787: hydrolase activity	5.29E-03
89	GO:0043130: ubiquitin binding	5.93E-03
90	GO:0005528: FK506 binding	5.93E-03
91	GO:0051536: iron-sulfur cluster binding	5.93E-03
92	GO:0005216: ion channel activity	6.35E-03
93	GO:0008324: cation transmembrane transporter activity	6.35E-03
94	GO:0030170: pyridoxal phosphate binding	7.07E-03
95	GO:0005102: receptor binding	8.60E-03
96	GO:0030551: cyclic nucleotide binding	9.08E-03
97	GO:0005249: voltage-gated potassium channel activity	9.08E-03
98	GO:0016853: isomerase activity	1.01E-02
99	GO:0004872: receptor activity	1.06E-02
100	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.11E-02
101	GO:0042802: identical protein binding	1.12E-02
102	GO:0004197: cysteine-type endopeptidase activity	1.16E-02
103	GO:0016597: amino acid binding	1.38E-02
104	GO:0015250: water channel activity	1.44E-02
105	GO:0051213: dioxygenase activity	1.44E-02
106	GO:0102483: scopolin beta-glucosidase activity	1.62E-02
107	GO:0050897: cobalt ion binding	1.93E-02
108	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.06E-02
109	GO:0050661: NADP binding	2.25E-02
110	GO:0004364: glutathione transferase activity	2.39E-02
111	GO:0004185: serine-type carboxypeptidase activity	2.46E-02
112	GO:0051537: 2 iron, 2 sulfur cluster binding	2.60E-02
113	GO:0051287: NAD binding	2.82E-02
114	GO:0015171: amino acid transmembrane transporter activity	3.27E-02
115	GO:0008234: cysteine-type peptidase activity	3.27E-02
116	GO:0016491: oxidoreductase activity	3.36E-02
117	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.67E-02
118	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.67E-02
119	GO:0020037: heme binding	4.19E-02
120	GO:0019843: rRNA binding	4.59E-02
121	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.68E-02
122	GO:0004252: serine-type endopeptidase activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005773: vacuole	2.25E-07
2	GO:0045271: respiratory chain complex I	2.28E-07
3	GO:0005839: proteasome core complex	2.85E-07
4	GO:0005829: cytosol	1.37E-06
5	GO:0005747: mitochondrial respiratory chain complex I	2.14E-06
6	GO:0031966: mitochondrial membrane	2.69E-05
7	GO:0000502: proteasome complex	3.10E-05
8	GO:0019773: proteasome core complex, alpha-subunit complex	8.55E-05
9	GO:1990429: peroxisomal importomer complex	1.12E-04
10	GO:0005759: mitochondrial matrix	1.39E-04
11	GO:0005774: vacuolar membrane	3.04E-04
12	GO:0005758: mitochondrial intermembrane space	3.73E-04
13	GO:0009536: plastid	4.78E-04
14	GO:0033180: proton-transporting V-type ATPase, V1 domain	6.19E-04
15	GO:0005746: mitochondrial respiratory chain	1.04E-03
16	GO:0005788: endoplasmic reticulum lumen	1.35E-03
17	GO:0005783: endoplasmic reticulum	1.68E-03
18	GO:0031359: integral component of chloroplast outer membrane	1.78E-03
19	GO:0046930: pore complex	2.35E-03
20	GO:0005763: mitochondrial small ribosomal subunit	2.66E-03
21	GO:0005764: lysosome	4.74E-03
22	GO:0009706: chloroplast inner membrane	5.09E-03
23	GO:0005753: mitochondrial proton-transporting ATP synthase complex	5.13E-03
24	GO:0009507: chloroplast	5.32E-03
25	GO:0009543: chloroplast thylakoid lumen	6.38E-03
26	GO:0009941: chloroplast envelope	6.76E-03
27	GO:0005741: mitochondrial outer membrane	6.78E-03
28	GO:0005777: peroxisome	1.16E-02
29	GO:0005739: mitochondrion	1.32E-02
30	GO:0005778: peroxisomal membrane	1.33E-02
31	GO:0005618: cell wall	1.54E-02
32	GO:0009707: chloroplast outer membrane	1.74E-02
33	GO:0000325: plant-type vacuole	1.93E-02
34	GO:0005743: mitochondrial inner membrane	2.33E-02
35	GO:0005576: extracellular region	2.81E-02
36	GO:0005887: integral component of plasma membrane	3.40E-02
37	GO:0012505: endomembrane system	3.83E-02
38	GO:0048046: apoplast	4.04E-02