Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042353: fucose biosynthetic process0.00E+00
2GO:0010046: response to mycotoxin0.00E+00
3GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
4GO:0010372: positive regulation of gibberellin biosynthetic process4.12E-05
5GO:2000030: regulation of response to red or far red light4.12E-05
6GO:0043255: regulation of carbohydrate biosynthetic process4.12E-05
7GO:0042754: negative regulation of circadian rhythm4.12E-05
8GO:0010289: homogalacturonan biosynthetic process4.12E-05
9GO:0030244: cellulose biosynthetic process1.37E-04
10GO:0006536: glutamate metabolic process1.53E-04
11GO:0009694: jasmonic acid metabolic process1.53E-04
12GO:0009834: plant-type secondary cell wall biogenesis1.53E-04
13GO:0006665: sphingolipid metabolic process1.98E-04
14GO:0010256: endomembrane system organization2.47E-04
15GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.97E-04
16GO:0009809: lignin biosynthetic process3.13E-04
17GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway3.49E-04
18GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.49E-04
19GO:0006402: mRNA catabolic process4.04E-04
20GO:0007155: cell adhesion4.04E-04
21GO:0009827: plant-type cell wall modification4.60E-04
22GO:0006997: nucleus organization4.60E-04
23GO:0009699: phenylpropanoid biosynthetic process4.60E-04
24GO:0098656: anion transmembrane transport5.18E-04
25GO:0071365: cellular response to auxin stimulus7.65E-04
26GO:0034605: cellular response to heat8.97E-04
27GO:0009969: xyloglucan biosynthetic process9.64E-04
28GO:0009833: plant-type primary cell wall biogenesis1.03E-03
29GO:0009863: salicylic acid mediated signaling pathway1.10E-03
30GO:2000377: regulation of reactive oxygen species metabolic process1.10E-03
31GO:0016998: cell wall macromolecule catabolic process1.25E-03
32GO:0031348: negative regulation of defense response1.33E-03
33GO:0009686: gibberellin biosynthetic process1.40E-03
34GO:0009409: response to cold1.40E-03
35GO:0046777: protein autophosphorylation1.48E-03
36GO:0009306: protein secretion1.48E-03
37GO:0006952: defense response1.61E-03
38GO:0045489: pectin biosynthetic process1.73E-03
39GO:0010193: response to ozone1.99E-03
40GO:0031047: gene silencing by RNA2.08E-03
41GO:0048364: root development2.12E-03
42GO:0009627: systemic acquired resistance2.74E-03
43GO:0010119: regulation of stomatal movement3.36E-03
44GO:0009611: response to wounding3.64E-03
45GO:0035556: intracellular signal transduction3.76E-03
46GO:0009640: photomorphogenesis4.25E-03
47GO:0009585: red, far-red light phototransduction5.21E-03
48GO:0010224: response to UV-B5.34E-03
49GO:0048367: shoot system development5.98E-03
50GO:0009624: response to nematode6.64E-03
51GO:0018105: peptidyl-serine phosphorylation6.78E-03
52GO:0009742: brassinosteroid mediated signaling pathway6.92E-03
53GO:0009845: seed germination8.21E-03
54GO:0006633: fatty acid biosynthetic process9.10E-03
55GO:0007623: circadian rhythm9.73E-03
56GO:0007166: cell surface receptor signaling pathway1.07E-02
57GO:0006468: protein phosphorylation1.27E-02
58GO:0009826: unidimensional cell growth1.29E-02
59GO:0048366: leaf development1.49E-02
60GO:0006886: intracellular protein transport1.79E-02
61GO:0032259: methylation1.97E-02
62GO:0006397: mRNA processing2.09E-02
63GO:0009753: response to jasmonic acid2.14E-02
64GO:0009735: response to cytokinin2.87E-02
65GO:0009738: abscisic acid-activated signaling pathway2.99E-02
66GO:0009416: response to light stimulus3.06E-02
67GO:0006457: protein folding3.68E-02
RankGO TermAdjusted P value
1GO:0070566: adenylyltransferase activity0.00E+00
2GO:0080123: jasmonate-amino synthetase activity0.00E+00
3GO:0010857: calcium-dependent protein kinase activity0.00E+00
4GO:0017040: ceramidase activity4.12E-05
5GO:0004351: glutamate decarboxylase activity1.11E-04
6GO:0009922: fatty acid elongase activity1.98E-04
7GO:0019899: enzyme binding3.49E-04
8GO:0004143: diacylglycerol kinase activity3.49E-04
9GO:0016621: cinnamoyl-CoA reductase activity3.49E-04
10GO:0003951: NAD+ kinase activity4.60E-04
11GO:0005516: calmodulin binding6.69E-04
12GO:0005315: inorganic phosphate transmembrane transporter activity8.30E-04
13GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.03E-03
14GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.03E-03
15GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.03E-03
16GO:0051087: chaperone binding1.18E-03
17GO:0016760: cellulose synthase (UDP-forming) activity1.40E-03
18GO:0008514: organic anion transmembrane transporter activity1.48E-03
19GO:0008536: Ran GTPase binding1.73E-03
20GO:0050662: coenzyme binding1.82E-03
21GO:0004518: nuclease activity2.08E-03
22GO:0016759: cellulose synthase activity2.26E-03
23GO:0016413: O-acetyltransferase activity2.45E-03
24GO:0009931: calcium-dependent protein serine/threonine kinase activity2.74E-03
25GO:0004683: calmodulin-dependent protein kinase activity2.84E-03
26GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.94E-03
27GO:0031625: ubiquitin protein ligase binding5.59E-03
28GO:0003779: actin binding6.51E-03
29GO:0004674: protein serine/threonine kinase activity7.15E-03
30GO:0003824: catalytic activity7.89E-03
31GO:0030170: pyridoxal phosphate binding8.35E-03
32GO:0015144: carbohydrate transmembrane transporter activity8.80E-03
33GO:0008565: protein transporter activity8.80E-03
34GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.26E-03
35GO:0005351: sugar:proton symporter activity9.57E-03
36GO:0004672: protein kinase activity1.06E-02
37GO:0008168: methyltransferase activity1.29E-02
38GO:0016757: transferase activity, transferring glycosyl groups2.46E-02
39GO:0005524: ATP binding3.33E-02
40GO:0016301: kinase activity3.37E-02
41GO:0030246: carbohydrate binding3.78E-02
42GO:0005509: calcium ion binding4.77E-02
RankGO TermAdjusted P value
1GO:0005802: trans-Golgi network7.30E-11
2GO:0005768: endosome1.23E-10
3GO:0005794: Golgi apparatus1.24E-06
4GO:0000139: Golgi membrane1.40E-05
5GO:0016442: RISC complex1.57E-05
6GO:0009506: plasmodesma2.88E-04
7GO:0030173: integral component of Golgi membrane2.97E-04
8GO:0005635: nuclear envelope3.35E-04
9GO:0010494: cytoplasmic stress granule5.18E-04
10GO:0048471: perinuclear region of cytoplasm7.00E-04
11GO:0032580: Golgi cisterna membrane2.26E-03
12GO:0005778: peroxisomal membrane2.36E-03
13GO:0000932: P-body2.55E-03
14GO:0005643: nuclear pore3.05E-03
15GO:0010008: endosome membrane5.98E-03
16GO:0016021: integral component of membrane1.15E-02
17GO:0005777: peroxisome3.38E-02
18GO:0005886: plasma membrane4.56E-02
19GO:0016020: membrane4.80E-02
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Gene type



Gene DE type