Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
2GO:0033587: shikimate biosynthetic process0.00E+00
3GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
4GO:0010055: atrichoblast differentiation0.00E+00
5GO:0006564: L-serine biosynthetic process2.73E-06
6GO:0046256: 2,4,6-trinitrotoluene catabolic process3.64E-05
7GO:0032491: detection of molecule of fungal origin3.64E-05
8GO:0032107: regulation of response to nutrient levels3.64E-05
9GO:0009820: alkaloid metabolic process3.64E-05
10GO:0010365: positive regulation of ethylene biosynthetic process3.64E-05
11GO:0002240: response to molecule of oomycetes origin9.09E-05
12GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.09E-05
13GO:0071497: cellular response to freezing9.09E-05
14GO:1990069: stomatal opening9.09E-05
15GO:0009058: biosynthetic process1.31E-04
16GO:0046417: chorismate metabolic process1.58E-04
17GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement1.58E-04
18GO:0009413: response to flooding2.33E-04
19GO:0030007: cellular potassium ion homeostasis3.14E-04
20GO:0051365: cellular response to potassium ion starvation3.14E-04
21GO:0009228: thiamine biosynthetic process4.92E-04
22GO:0002238: response to molecule of fungal origin4.92E-04
23GO:0050829: defense response to Gram-negative bacterium6.87E-04
24GO:1900057: positive regulation of leaf senescence6.87E-04
25GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.87E-04
26GO:0098869: cellular oxidant detoxification6.87E-04
27GO:0009850: auxin metabolic process7.90E-04
28GO:0010497: plasmodesmata-mediated intercellular transport8.97E-04
29GO:0010204: defense response signaling pathway, resistance gene-independent8.97E-04
30GO:0006098: pentose-phosphate shunt1.01E-03
31GO:0009620: response to fungus1.10E-03
32GO:2000280: regulation of root development1.12E-03
33GO:0009073: aromatic amino acid family biosynthetic process1.36E-03
34GO:0002237: response to molecule of bacterial origin1.76E-03
35GO:0006874: cellular calcium ion homeostasis2.33E-03
36GO:0016998: cell wall macromolecule catabolic process2.48E-03
37GO:0071456: cellular response to hypoxia2.64E-03
38GO:0030245: cellulose catabolic process2.64E-03
39GO:0009561: megagametogenesis2.96E-03
40GO:0006979: response to oxidative stress3.66E-03
41GO:0055114: oxidation-reduction process4.51E-03
42GO:0019760: glucosinolate metabolic process4.56E-03
43GO:0051607: defense response to virus4.95E-03
44GO:0010029: regulation of seed germination5.35E-03
45GO:0009753: response to jasmonic acid6.10E-03
46GO:0009407: toxin catabolic process6.61E-03
47GO:0048527: lateral root development6.83E-03
48GO:0006099: tricarboxylic acid cycle7.51E-03
49GO:0007275: multicellular organism development8.55E-03
50GO:0051707: response to other organism8.68E-03
51GO:0009636: response to toxic substance9.42E-03
52GO:0009809: lignin biosynthetic process1.07E-02
53GO:0006857: oligopeptide transport1.12E-02
54GO:0055085: transmembrane transport1.28E-02
55GO:0042545: cell wall modification1.34E-02
56GO:0040008: regulation of growth1.96E-02
57GO:0010150: leaf senescence2.02E-02
58GO:0045490: pectin catabolic process2.02E-02
59GO:0071555: cell wall organization2.05E-02
60GO:0007166: cell surface receptor signaling pathway2.23E-02
61GO:0009617: response to bacterium2.29E-02
62GO:0009723: response to ethylene3.06E-02
63GO:0046686: response to cadmium ion3.20E-02
64GO:0080167: response to karrikin3.22E-02
65GO:0046777: protein autophosphorylation3.38E-02
66GO:0044550: secondary metabolite biosynthetic process3.42E-02
67GO:0016042: lipid catabolic process4.16E-02
68GO:0009751: response to salicylic acid4.20E-02
69GO:0008152: metabolic process4.55E-02
70GO:0009793: embryo development ending in seed dormancy4.73E-02
RankGO TermAdjusted P value
1GO:0010211: IAA-Leu conjugate hydrolase activity0.00E+00
2GO:0010210: IAA-Phe conjugate hydrolase activity0.00E+00
3GO:0008281: sulfonylurea receptor activity0.00E+00
4GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.64E-05
5GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity3.64E-05
6GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.64E-05
7GO:0004106: chorismate mutase activity9.09E-05
8GO:0019172: glyoxalase III activity9.09E-05
9GO:0004617: phosphoglycerate dehydrogenase activity9.09E-05
10GO:0005471: ATP:ADP antiporter activity4.01E-04
11GO:0016688: L-ascorbate peroxidase activity4.92E-04
12GO:0043295: glutathione binding6.87E-04
13GO:0004033: aldo-keto reductase (NADP) activity7.90E-04
14GO:0071949: FAD binding1.01E-03
15GO:0016844: strictosidine synthase activity1.12E-03
16GO:0008559: xenobiotic-transporting ATPase activity1.36E-03
17GO:0015198: oligopeptide transporter activity1.49E-03
18GO:0005217: intracellular ligand-gated ion channel activity1.89E-03
19GO:0004970: ionotropic glutamate receptor activity1.89E-03
20GO:0001046: core promoter sequence-specific DNA binding2.18E-03
21GO:0008810: cellulase activity2.80E-03
22GO:0016788: hydrolase activity, acting on ester bonds3.19E-03
23GO:0005199: structural constituent of cell wall3.47E-03
24GO:0008237: metallopeptidase activity4.75E-03
25GO:0016597: amino acid binding4.95E-03
26GO:0009055: electron carrier activity6.10E-03
27GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.83E-03
28GO:0030145: manganese ion binding6.83E-03
29GO:0043565: sequence-specific DNA binding7.24E-03
30GO:0004364: glutathione transferase activity8.44E-03
31GO:0051287: NAD binding9.93E-03
32GO:0045330: aspartyl esterase activity1.15E-02
33GO:0045735: nutrient reservoir activity1.20E-02
34GO:0022857: transmembrane transporter activity1.32E-02
35GO:0030599: pectinesterase activity1.32E-02
36GO:0016746: transferase activity, transferring acyl groups1.40E-02
37GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.92E-02
38GO:0046910: pectinesterase inhibitor activity1.92E-02
39GO:0044212: transcription regulatory region DNA binding2.05E-02
40GO:0003824: catalytic activity2.25E-02
41GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.40E-02
42GO:0050660: flavin adenine dinucleotide binding3.06E-02
43GO:0004497: monooxygenase activity3.22E-02
44GO:0052689: carboxylic ester hydrolase activity3.46E-02
45GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.66E-02
46GO:0004871: signal transducer activity3.78E-02
47GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.86E-02
48GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.95E-02
RankGO TermAdjusted P value
1GO:0045252: oxoglutarate dehydrogenase complex3.64E-05
2GO:0009536: plastid1.27E-04
3GO:0005886: plasma membrane9.33E-04
4GO:0009506: plasmodesma2.62E-03
5GO:0046658: anchored component of plasma membrane2.68E-03
6GO:0071944: cell periphery4.37E-03
7GO:0005794: Golgi apparatus4.75E-03
8GO:0005618: cell wall4.92E-03
9GO:0000325: plant-type vacuole6.83E-03
10GO:0031902: late endosome membrane8.21E-03
11GO:0031225: anchored component of membrane1.58E-02
12GO:0009543: chloroplast thylakoid lumen1.61E-02
13GO:0005802: trans-Golgi network1.62E-02
14GO:0005774: vacuolar membrane1.75E-02
15GO:0005829: cytosol1.82E-02
16GO:0005768: endosome1.85E-02
17GO:0009505: plant-type cell wall2.57E-02
18GO:0016021: integral component of membrane2.96E-02
19GO:0005773: vacuole2.99E-02
20GO:0031969: chloroplast membrane3.22E-02
21GO:0009570: chloroplast stroma3.89E-02
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Gene type



Gene DE type