co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:0033587: shikimate biosynthetic process	0.00E+00
3	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
4	GO:0010055: atrichoblast differentiation	0.00E+00
5	GO:0006564: L-serine biosynthetic process	2.73E-06
6	GO:0046256: 2,4,6-trinitrotoluene catabolic process	3.64E-05
7	GO:0032491: detection of molecule of fungal origin	3.64E-05
8	GO:0032107: regulation of response to nutrient levels	3.64E-05
9	GO:0009820: alkaloid metabolic process	3.64E-05
10	GO:0010365: positive regulation of ethylene biosynthetic process	3.64E-05
11	GO:0002240: response to molecule of oomycetes origin	9.09E-05
12	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	9.09E-05
13	GO:0071497: cellular response to freezing	9.09E-05
14	GO:1990069: stomatal opening	9.09E-05
15	GO:0009058: biosynthetic process	1.31E-04
16	GO:0046417: chorismate metabolic process	1.58E-04
17	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	1.58E-04
18	GO:0009413: response to flooding	2.33E-04
19	GO:0030007: cellular potassium ion homeostasis	3.14E-04
20	GO:0051365: cellular response to potassium ion starvation	3.14E-04
21	GO:0009228: thiamine biosynthetic process	4.92E-04
22	GO:0002238: response to molecule of fungal origin	4.92E-04
23	GO:0050829: defense response to Gram-negative bacterium	6.87E-04
24	GO:1900057: positive regulation of leaf senescence	6.87E-04
25	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.87E-04
26	GO:0098869: cellular oxidant detoxification	6.87E-04
27	GO:0009850: auxin metabolic process	7.90E-04
28	GO:0010497: plasmodesmata-mediated intercellular transport	8.97E-04
29	GO:0010204: defense response signaling pathway, resistance gene-independent	8.97E-04
30	GO:0006098: pentose-phosphate shunt	1.01E-03
31	GO:0009620: response to fungus	1.10E-03
32	GO:2000280: regulation of root development	1.12E-03
33	GO:0009073: aromatic amino acid family biosynthetic process	1.36E-03
34	GO:0002237: response to molecule of bacterial origin	1.76E-03
35	GO:0006874: cellular calcium ion homeostasis	2.33E-03
36	GO:0016998: cell wall macromolecule catabolic process	2.48E-03
37	GO:0071456: cellular response to hypoxia	2.64E-03
38	GO:0030245: cellulose catabolic process	2.64E-03
39	GO:0009561: megagametogenesis	2.96E-03
40	GO:0006979: response to oxidative stress	3.66E-03
41	GO:0055114: oxidation-reduction process	4.51E-03
42	GO:0019760: glucosinolate metabolic process	4.56E-03
43	GO:0051607: defense response to virus	4.95E-03
44	GO:0010029: regulation of seed germination	5.35E-03
45	GO:0009753: response to jasmonic acid	6.10E-03
46	GO:0009407: toxin catabolic process	6.61E-03
47	GO:0048527: lateral root development	6.83E-03
48	GO:0006099: tricarboxylic acid cycle	7.51E-03
49	GO:0007275: multicellular organism development	8.55E-03
50	GO:0051707: response to other organism	8.68E-03
51	GO:0009636: response to toxic substance	9.42E-03
52	GO:0009809: lignin biosynthetic process	1.07E-02
53	GO:0006857: oligopeptide transport	1.12E-02
54	GO:0055085: transmembrane transport	1.28E-02
55	GO:0042545: cell wall modification	1.34E-02
56	GO:0040008: regulation of growth	1.96E-02
57	GO:0010150: leaf senescence	2.02E-02
58	GO:0045490: pectin catabolic process	2.02E-02
59	GO:0071555: cell wall organization	2.05E-02
60	GO:0007166: cell surface receptor signaling pathway	2.23E-02
61	GO:0009617: response to bacterium	2.29E-02
62	GO:0009723: response to ethylene	3.06E-02
63	GO:0046686: response to cadmium ion	3.20E-02
64	GO:0080167: response to karrikin	3.22E-02
65	GO:0046777: protein autophosphorylation	3.38E-02
66	GO:0044550: secondary metabolite biosynthetic process	3.42E-02
67	GO:0016042: lipid catabolic process	4.16E-02
68	GO:0009751: response to salicylic acid	4.20E-02
69	GO:0008152: metabolic process	4.55E-02
70	GO:0009793: embryo development ending in seed dormancy	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0010211: IAA-Leu conjugate hydrolase activity	0.00E+00
2	GO:0010210: IAA-Phe conjugate hydrolase activity	0.00E+00
3	GO:0008281: sulfonylurea receptor activity	0.00E+00
4	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.64E-05
5	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	3.64E-05
6	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.64E-05
7	GO:0004106: chorismate mutase activity	9.09E-05
8	GO:0019172: glyoxalase III activity	9.09E-05
9	GO:0004617: phosphoglycerate dehydrogenase activity	9.09E-05
10	GO:0005471: ATP:ADP antiporter activity	4.01E-04
11	GO:0016688: L-ascorbate peroxidase activity	4.92E-04
12	GO:0043295: glutathione binding	6.87E-04
13	GO:0004033: aldo-keto reductase (NADP) activity	7.90E-04
14	GO:0071949: FAD binding	1.01E-03
15	GO:0016844: strictosidine synthase activity	1.12E-03
16	GO:0008559: xenobiotic-transporting ATPase activity	1.36E-03
17	GO:0015198: oligopeptide transporter activity	1.49E-03
18	GO:0005217: intracellular ligand-gated ion channel activity	1.89E-03
19	GO:0004970: ionotropic glutamate receptor activity	1.89E-03
20	GO:0001046: core promoter sequence-specific DNA binding	2.18E-03
21	GO:0008810: cellulase activity	2.80E-03
22	GO:0016788: hydrolase activity, acting on ester bonds	3.19E-03
23	GO:0005199: structural constituent of cell wall	3.47E-03
24	GO:0008237: metallopeptidase activity	4.75E-03
25	GO:0016597: amino acid binding	4.95E-03
26	GO:0009055: electron carrier activity	6.10E-03
27	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.83E-03
28	GO:0030145: manganese ion binding	6.83E-03
29	GO:0043565: sequence-specific DNA binding	7.24E-03
30	GO:0004364: glutathione transferase activity	8.44E-03
31	GO:0051287: NAD binding	9.93E-03
32	GO:0045330: aspartyl esterase activity	1.15E-02
33	GO:0045735: nutrient reservoir activity	1.20E-02
34	GO:0022857: transmembrane transporter activity	1.32E-02
35	GO:0030599: pectinesterase activity	1.32E-02
36	GO:0016746: transferase activity, transferring acyl groups	1.40E-02
37	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.92E-02
38	GO:0046910: pectinesterase inhibitor activity	1.92E-02
39	GO:0044212: transcription regulatory region DNA binding	2.05E-02
40	GO:0003824: catalytic activity	2.25E-02
41	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.40E-02
42	GO:0050660: flavin adenine dinucleotide binding	3.06E-02
43	GO:0004497: monooxygenase activity	3.22E-02
44	GO:0052689: carboxylic ester hydrolase activity	3.46E-02
45	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.66E-02
46	GO:0004871: signal transducer activity	3.78E-02
47	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.86E-02
48	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.95E-02

Rank	GO Term	Adjusted P value
1	GO:0045252: oxoglutarate dehydrogenase complex	3.64E-05
2	GO:0009536: plastid	1.27E-04
3	GO:0005886: plasma membrane	9.33E-04
4	GO:0009506: plasmodesma	2.62E-03
5	GO:0046658: anchored component of plasma membrane	2.68E-03
6	GO:0071944: cell periphery	4.37E-03
7	GO:0005794: Golgi apparatus	4.75E-03
8	GO:0005618: cell wall	4.92E-03
9	GO:0000325: plant-type vacuole	6.83E-03
10	GO:0031902: late endosome membrane	8.21E-03
11	GO:0031225: anchored component of membrane	1.58E-02
12	GO:0009543: chloroplast thylakoid lumen	1.61E-02
13	GO:0005802: trans-Golgi network	1.62E-02
14	GO:0005774: vacuolar membrane	1.75E-02
15	GO:0005829: cytosol	1.82E-02
16	GO:0005768: endosome	1.85E-02
17	GO:0009505: plant-type cell wall	2.57E-02
18	GO:0016021: integral component of membrane	2.96E-02
19	GO:0005773: vacuole	2.99E-02
20	GO:0031969: chloroplast membrane	3.22E-02
21	GO:0009570: chloroplast stroma	3.89E-02