Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02080

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
2GO:0032211: negative regulation of telomere maintenance via telomerase0.00E+00
3GO:0007530: sex determination0.00E+00
4GO:0070918: production of small RNA involved in gene silencing by RNA0.00E+00
5GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
6GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
7GO:0090239: regulation of histone H4 acetylation0.00E+00
8GO:0001881: receptor recycling0.00E+00
9GO:0000740: nuclear membrane fusion0.00E+00
10GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
11GO:0006412: translation1.87E-141
12GO:0042254: ribosome biogenesis4.08E-61
13GO:0000027: ribosomal large subunit assembly5.48E-11
14GO:0000028: ribosomal small subunit assembly2.06E-06
15GO:0006626: protein targeting to mitochondrion2.82E-05
16GO:0009955: adaxial/abaxial pattern specification3.53E-05
17GO:0009735: response to cytokinin6.18E-05
18GO:1902626: assembly of large subunit precursor of preribosome8.08E-05
19GO:0002181: cytoplasmic translation8.08E-05
20GO:0000387: spliceosomal snRNP assembly1.84E-04
21GO:0006820: anion transport3.44E-04
22GO:0043248: proteasome assembly5.77E-04
23GO:0009651: response to salt stress6.60E-04
24GO:0051603: proteolysis involved in cellular protein catabolic process7.44E-04
25GO:0030490: maturation of SSU-rRNA7.72E-04
26GO:2001006: regulation of cellulose biosynthetic process7.72E-04
27GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)7.72E-04
28GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)7.72E-04
29GO:0018002: N-terminal peptidyl-glutamic acid acetylation7.72E-04
30GO:0006407: rRNA export from nucleus7.72E-04
31GO:0006511: ubiquitin-dependent protein catabolic process7.72E-04
32GO:0006475: internal protein amino acid acetylation7.72E-04
33GO:0015801: aromatic amino acid transport7.72E-04
34GO:0017198: N-terminal peptidyl-serine acetylation7.72E-04
35GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c9.73E-04
36GO:0006414: translational elongation9.99E-04
37GO:0000413: protein peptidyl-prolyl isomerization1.62E-03
38GO:0048569: post-embryonic animal organ development1.67E-03
39GO:0043981: histone H4-K5 acetylation1.67E-03
40GO:0055129: L-proline biosynthetic process1.67E-03
41GO:0006452: translational frameshifting1.67E-03
42GO:0010198: synergid death1.67E-03
43GO:0051788: response to misfolded protein1.67E-03
44GO:0006432: phenylalanyl-tRNA aminoacylation1.67E-03
45GO:0045905: positive regulation of translational termination1.67E-03
46GO:0071668: plant-type cell wall assembly1.67E-03
47GO:0034243: regulation of transcription elongation from RNA polymerase II promoter1.67E-03
48GO:0045901: positive regulation of translational elongation1.67E-03
49GO:0000398: mRNA splicing, via spliceosome1.68E-03
50GO:0098656: anion transmembrane transport1.77E-03
51GO:0009245: lipid A biosynthetic process1.77E-03
52GO:0042256: mature ribosome assembly2.76E-03
53GO:0010452: histone H3-K36 methylation2.76E-03
54GO:0032786: positive regulation of DNA-templated transcription, elongation2.76E-03
55GO:0008333: endosome to lysosome transport2.76E-03
56GO:1904278: positive regulation of wax biosynthetic process2.76E-03
57GO:0009150: purine ribonucleotide metabolic process2.76E-03
58GO:0045793: positive regulation of cell size2.76E-03
59GO:0034227: tRNA thio-modification2.76E-03
60GO:0070301: cellular response to hydrogen peroxide4.02E-03
61GO:0051085: chaperone mediated protein folding requiring cofactor4.02E-03
62GO:0006107: oxaloacetate metabolic process4.02E-03
63GO:0006241: CTP biosynthetic process4.02E-03
64GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity4.02E-03
65GO:0009647: skotomorphogenesis4.02E-03
66GO:0006165: nucleoside diphosphate phosphorylation4.02E-03
67GO:0006228: UTP biosynthetic process4.02E-03
68GO:0006164: purine nucleotide biosynthetic process4.02E-03
69GO:0006168: adenine salvage4.02E-03
70GO:0009558: embryo sac cellularization4.02E-03
71GO:0032877: positive regulation of DNA endoreduplication4.02E-03
72GO:0046836: glycolipid transport4.02E-03
73GO:0006166: purine ribonucleoside salvage4.02E-03
74GO:0051781: positive regulation of cell division5.43E-03
75GO:0042274: ribosomal small subunit biogenesis5.43E-03
76GO:0006183: GTP biosynthetic process5.43E-03
77GO:0010363: regulation of plant-type hypersensitive response5.43E-03
78GO:0006621: protein retention in ER lumen5.43E-03
79GO:0009165: nucleotide biosynthetic process5.43E-03
80GO:0009116: nucleoside metabolic process5.86E-03
81GO:0030150: protein import into mitochondrial matrix5.86E-03
82GO:0006289: nucleotide-excision repair5.86E-03
83GO:0006487: protein N-linked glycosylation5.86E-03
84GO:1902183: regulation of shoot apical meristem development6.99E-03
85GO:0044209: AMP salvage6.99E-03
86GO:0061077: chaperone-mediated protein folding7.13E-03
87GO:0051568: histone H3-K4 methylation8.69E-03
88GO:0000470: maturation of LSU-rRNA8.69E-03
89GO:0006555: methionine metabolic process8.69E-03
90GO:0045040: protein import into mitochondrial outer membrane8.69E-03
91GO:0006574: valine catabolic process8.69E-03
92GO:0006561: proline biosynthetic process8.69E-03
93GO:0009793: embryo development ending in seed dormancy1.03E-02
94GO:0019509: L-methionine salvage from methylthioadenosine1.05E-02
95GO:1901001: negative regulation of response to salt stress1.05E-02
96GO:0000911: cytokinesis by cell plate formation1.05E-02
97GO:0006120: mitochondrial electron transport, NADH to ubiquinone1.05E-02
98GO:0006413: translational initiation1.16E-02
99GO:0009965: leaf morphogenesis1.16E-02
100GO:0006662: glycerol ether metabolic process1.18E-02
101GO:0048528: post-embryonic root development1.25E-02
102GO:0032880: regulation of protein localization1.25E-02
103GO:0009690: cytokinin metabolic process1.46E-02
104GO:0006506: GPI anchor biosynthetic process1.46E-02
105GO:0050821: protein stabilization1.46E-02
106GO:0031540: regulation of anthocyanin biosynthetic process1.46E-02
107GO:0022900: electron transport chain1.68E-02
108GO:0010204: defense response signaling pathway, resistance gene-independent1.68E-02
109GO:0044030: regulation of DNA methylation1.68E-02
110GO:0009808: lignin metabolic process1.68E-02
111GO:0046686: response to cadmium ion1.79E-02
112GO:0006189: 'de novo' IMP biosynthetic process1.91E-02
113GO:0048589: developmental growth1.91E-02
114GO:0009060: aerobic respiration1.91E-02
115GO:0015780: nucleotide-sugar transport1.91E-02
116GO:0016441: posttranscriptional gene silencing2.40E-02
117GO:0006325: chromatin organization2.40E-02
118GO:0043069: negative regulation of programmed cell death2.40E-02
119GO:0015031: protein transport2.52E-02
120GO:0010015: root morphogenesis2.66E-02
121GO:0006913: nucleocytoplasmic transport2.66E-02
122GO:0015770: sucrose transport2.66E-02
123GO:0006790: sulfur compound metabolic process2.93E-02
124GO:0016925: protein sumoylation2.93E-02
125GO:0010102: lateral root morphogenesis3.21E-02
126GO:0010628: positive regulation of gene expression3.21E-02
127GO:0006807: nitrogen compound metabolic process3.21E-02
128GO:0006108: malate metabolic process3.21E-02
129GO:2000028: regulation of photoperiodism, flowering3.21E-02
130GO:0048467: gynoecium development3.50E-02
131GO:0007034: vacuolar transport3.50E-02
132GO:0006446: regulation of translational initiation3.50E-02
133GO:0034599: cellular response to oxidative stress3.68E-02
134GO:0010039: response to iron ion3.80E-02
135GO:0006406: mRNA export from nucleus4.41E-02
136GO:0045454: cell redox homeostasis4.43E-02
137GO:0008283: cell proliferation4.53E-02
138GO:0009908: flower development4.66E-02
139GO:0051302: regulation of cell division4.73E-02
140GO:0009644: response to high light intensity4.89E-02
RankGO TermAdjusted P value
1GO:0050152: omega-amidase activity0.00E+00
2GO:0004735: pyrroline-5-carboxylate reductase activity0.00E+00
3GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity0.00E+00
4GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
5GO:0003735: structural constituent of ribosome5.73E-180
6GO:0003729: mRNA binding8.31E-32
7GO:0019843: rRNA binding9.59E-14
8GO:0004298: threonine-type endopeptidase activity2.23E-07
9GO:0001055: RNA polymerase II activity7.95E-06
10GO:0001054: RNA polymerase I activity1.59E-05
11GO:0001056: RNA polymerase III activity2.14E-05
12GO:0008121: ubiquinol-cytochrome-c reductase activity5.41E-05
13GO:0015288: porin activity7.81E-05
14GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.94E-05
15GO:0008308: voltage-gated anion channel activity1.08E-04
16GO:0008097: 5S rRNA binding1.66E-04
17GO:0008233: peptidase activity2.49E-04
18GO:0003746: translation elongation factor activity2.49E-04
19GO:0004576: oligosaccharyl transferase activity2.79E-04
20GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity4.16E-04
21GO:0031177: phosphopantetheine binding5.77E-04
22GO:0003899: DNA-directed 5'-3' RNA polymerase activity6.99E-04
23GO:0000035: acyl binding7.64E-04
24GO:1990189: peptide-serine-N-acetyltransferase activity7.72E-04
25GO:1990190: peptide-glutamate-N-acetyltransferase activity7.72E-04
26GO:0005080: protein kinase C binding7.72E-04
27GO:0035614: snRNA stem-loop binding7.72E-04
28GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity9.65E-04
29GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.21E-03
30GO:0043022: ribosome binding1.21E-03
31GO:0015173: aromatic amino acid transmembrane transporter activity1.67E-03
32GO:0004826: phenylalanine-tRNA ligase activity1.67E-03
33GO:0030619: U1 snRNA binding1.67E-03
34GO:0008430: selenium binding2.76E-03
35GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity2.76E-03
36GO:0005047: signal recognition particle binding2.76E-03
37GO:0070181: small ribosomal subunit rRNA binding2.76E-03
38GO:0070180: large ribosomal subunit rRNA binding2.76E-03
39GO:0004129: cytochrome-c oxidase activity2.85E-03
40GO:0015266: protein channel activity3.72E-03
41GO:0017089: glycolipid transporter activity4.02E-03
42GO:0004749: ribose phosphate diphosphokinase activity4.02E-03
43GO:0003999: adenine phosphoribosyltransferase activity4.02E-03
44GO:0004550: nucleoside diphosphate kinase activity4.02E-03
45GO:0047627: adenylylsulfatase activity4.02E-03
46GO:0010011: auxin binding5.43E-03
47GO:0051861: glycolipid binding5.43E-03
48GO:0046923: ER retention sequence binding5.43E-03
49GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds5.43E-03
50GO:0070628: proteasome binding5.43E-03
51GO:0000993: RNA polymerase II core binding5.43E-03
52GO:0016004: phospholipase activator activity5.43E-03
53GO:0005528: FK506 binding5.86E-03
54GO:0050897: cobalt ion binding6.39E-03
55GO:0005275: amine transmembrane transporter activity6.99E-03
56GO:0031386: protein tag6.99E-03
57GO:0031593: polyubiquitin binding8.69E-03
58GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity8.69E-03
59GO:0047134: protein-disulfide reductase activity1.01E-02
60GO:0051920: peroxiredoxin activity1.05E-02
61GO:0005338: nucleotide-sugar transmembrane transporter activity1.25E-02
62GO:0042162: telomeric DNA binding1.25E-02
63GO:0004791: thioredoxin-disulfide reductase activity1.27E-02
64GO:0004872: receptor activity1.36E-02
65GO:0003723: RNA binding1.44E-02
66GO:0016209: antioxidant activity1.46E-02
67GO:0035064: methylated histone binding1.46E-02
68GO:0008137: NADH dehydrogenase (ubiquinone) activity1.46E-02
69GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.67E-02
70GO:0015035: protein disulfide oxidoreductase activity2.38E-02
71GO:0044183: protein binding involved in protein folding2.66E-02
72GO:0008515: sucrose transmembrane transporter activity2.66E-02
73GO:0046961: proton-transporting ATPase activity, rotational mechanism2.66E-02
74GO:0008794: arsenate reductase (glutaredoxin) activity2.66E-02
75GO:0008327: methyl-CpG binding2.66E-02
76GO:0000049: tRNA binding2.93E-02
77GO:0031072: heat shock protein binding3.21E-02
78GO:0003712: transcription cofactor activity3.80E-02
79GO:0051119: sugar transmembrane transporter activity3.80E-02
80GO:0043130: ubiquitin binding4.41E-02
81GO:0051536: iron-sulfur cluster binding4.41E-02
RankGO TermAdjusted P value
1GO:0043186: P granule0.00E+00
2GO:0005675: holo TFIIH complex0.00E+00
3GO:0005840: ribosome4.57E-130
4GO:0022626: cytosolic ribosome1.55E-115
5GO:0022625: cytosolic large ribosomal subunit6.30E-115
6GO:0022627: cytosolic small ribosomal subunit6.21E-73
7GO:0005829: cytosol3.49E-40
8GO:0005737: cytoplasm7.12E-35
9GO:0005730: nucleolus4.18E-34
10GO:0009506: plasmodesma1.38E-20
11GO:0005774: vacuolar membrane1.63E-15
12GO:0015934: large ribosomal subunit8.04E-15
13GO:0016020: membrane1.23E-11
14GO:0005773: vacuole1.65E-11
15GO:0015935: small ribosomal subunit1.40E-10
16GO:0000502: proteasome complex6.20E-09
17GO:0005839: proteasome core complex2.23E-07
18GO:0005665: DNA-directed RNA polymerase II, core complex6.73E-07
19GO:0005618: cell wall7.38E-07
20GO:0005750: mitochondrial respiratory chain complex III1.41E-06
21GO:0000419: DNA-directed RNA polymerase V complex2.67E-06
22GO:0005736: DNA-directed RNA polymerase I complex5.33E-06
23GO:0009507: chloroplast5.90E-06
24GO:0005666: DNA-directed RNA polymerase III complex7.95E-06
25GO:0005753: mitochondrial proton-transporting ATP synthase complex4.62E-05
26GO:0005732: small nucleolar ribonucleoprotein complex6.05E-05
27GO:0005853: eukaryotic translation elongation factor 1 complex8.08E-05
28GO:0005742: mitochondrial outer membrane translocase complex1.08E-04
29GO:0046930: pore complex1.08E-04
30GO:0000418: DNA-directed RNA polymerase IV complex2.32E-04
31GO:0019013: viral nucleocapsid4.10E-04
32GO:0008250: oligosaccharyltransferase complex4.16E-04
33GO:0005758: mitochondrial intermembrane space7.39E-04
34GO:0030686: 90S preribosome7.72E-04
35GO:0032044: DSIF complex7.72E-04
36GO:0005741: mitochondrial outer membrane9.46E-04
37GO:0035145: exon-exon junction complex1.67E-03
38GO:0031415: NatA complex1.67E-03
39GO:0005697: telomerase holoenzyme complex1.67E-03
40GO:0005685: U1 snRNP1.77E-03
41GO:0071011: precatalytic spliceosome2.10E-03
42GO:0000439: core TFIIH complex2.76E-03
43GO:0034719: SMN-Sm protein complex2.76E-03
44GO:0005886: plasma membrane2.77E-03
45GO:0008541: proteasome regulatory particle, lid subcomplex2.85E-03
46GO:0071013: catalytic step 2 spliceosome2.85E-03
47GO:0033180: proton-transporting V-type ATPase, V1 domain4.02E-03
48GO:1990726: Lsm1-7-Pat1 complex4.02E-03
49GO:0005788: endoplasmic reticulum lumen4.05E-03
50GO:0009536: plastid4.10E-03
51GO:0005681: spliceosomal complex4.21E-03
52GO:0005747: mitochondrial respiratory chain complex I4.42E-03
53GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)5.43E-03
54GO:0016593: Cdc73/Paf1 complex5.43E-03
55GO:0005682: U5 snRNP5.43E-03
56GO:0070469: respiratory chain6.48E-03
57GO:0097526: spliceosomal tri-snRNP complex6.99E-03
58GO:0005746: mitochondrial respiratory chain6.99E-03
59GO:0005687: U4 snRNP6.99E-03
60GO:0030904: retromer complex8.69E-03
61GO:0005771: multivesicular body8.69E-03
62GO:0005762: mitochondrial large ribosomal subunit1.05E-02
63GO:0005689: U12-type spliceosomal complex1.05E-02
64GO:0016272: prefoldin complex1.05E-02
65GO:0045273: respiratory chain complex II1.46E-02
66GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.46E-02
67GO:0005688: U6 snRNP1.46E-02
68GO:0071004: U2-type prespliceosome1.46E-02
69GO:0019773: proteasome core complex, alpha-subunit complex1.68E-02
70GO:0046540: U4/U6 x U5 tri-snRNP complex1.68E-02
71GO:0031090: organelle membrane1.91E-02
72GO:0015030: Cajal body2.15E-02
73GO:0005740: mitochondrial envelope2.40E-02
74GO:0005686: U2 snRNP2.40E-02
75GO:0005622: intracellular2.65E-02
76GO:0005852: eukaryotic translation initiation factor 3 complex2.66E-02
77GO:0048471: perinuclear region of cytoplasm2.66E-02
78GO:0031307: integral component of mitochondrial outer membrane2.93E-02
79GO:0005654: nucleoplasm2.94E-02
80GO:0009508: plastid chromosome3.21E-02
81GO:0005783: endoplasmic reticulum3.36E-02
82GO:0005759: mitochondrial matrix4.03E-02
83GO:0045271: respiratory chain complex I4.73E-02
84GO:0005739: mitochondrion4.97E-02
<
Gene type



Gene DE type