GO Enrichment Analysis of Co-expressed Genes with
AT3G02050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:0015843: methylammonium transport | 0.00E+00 |
| 3 | GO:0071483: cellular response to blue light | 4.77E-10 |
| 4 | GO:0009902: chloroplast relocation | 5.27E-07 |
| 5 | GO:0010362: negative regulation of anion channel activity by blue light | 1.87E-05 |
| 6 | GO:0046467: membrane lipid biosynthetic process | 1.87E-05 |
| 7 | GO:0042550: photosystem I stabilization | 4.85E-05 |
| 8 | GO:0042853: L-alanine catabolic process | 4.85E-05 |
| 9 | GO:0006898: receptor-mediated endocytosis | 4.85E-05 |
| 10 | GO:0005977: glycogen metabolic process | 8.61E-05 |
| 11 | GO:0009658: chloroplast organization | 1.08E-04 |
| 12 | GO:2001141: regulation of RNA biosynthetic process | 1.30E-04 |
| 13 | GO:0015696: ammonium transport | 1.30E-04 |
| 14 | GO:0010021: amylopectin biosynthetic process | 1.78E-04 |
| 15 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.78E-04 |
| 16 | GO:0072488: ammonium transmembrane transport | 1.78E-04 |
| 17 | GO:0006546: glycine catabolic process | 1.78E-04 |
| 18 | GO:0009637: response to blue light | 2.21E-04 |
| 19 | GO:0009904: chloroplast accumulation movement | 2.30E-04 |
| 20 | GO:0010236: plastoquinone biosynthetic process | 2.30E-04 |
| 21 | GO:0009643: photosynthetic acclimation | 2.85E-04 |
| 22 | GO:0009903: chloroplast avoidance movement | 3.42E-04 |
| 23 | GO:0009648: photoperiodism | 3.42E-04 |
| 24 | GO:0070370: cellular heat acclimation | 4.02E-04 |
| 25 | GO:0019375: galactolipid biosynthetic process | 4.64E-04 |
| 26 | GO:0010100: negative regulation of photomorphogenesis | 5.27E-04 |
| 27 | GO:0009624: response to nematode | 5.45E-04 |
| 28 | GO:0034765: regulation of ion transmembrane transport | 5.93E-04 |
| 29 | GO:0009638: phototropism | 6.61E-04 |
| 30 | GO:0009641: shade avoidance | 7.30E-04 |
| 31 | GO:0009970: cellular response to sulfate starvation | 7.30E-04 |
| 32 | GO:0006995: cellular response to nitrogen starvation | 7.30E-04 |
| 33 | GO:0016485: protein processing | 8.02E-04 |
| 34 | GO:0006352: DNA-templated transcription, initiation | 8.02E-04 |
| 35 | GO:0009767: photosynthetic electron transport chain | 9.49E-04 |
| 36 | GO:0010223: secondary shoot formation | 1.02E-03 |
| 37 | GO:0010207: photosystem II assembly | 1.02E-03 |
| 38 | GO:0007015: actin filament organization | 1.02E-03 |
| 39 | GO:0042343: indole glucosinolate metabolic process | 1.10E-03 |
| 40 | GO:0008299: isoprenoid biosynthetic process | 1.35E-03 |
| 41 | GO:0098542: defense response to other organism | 1.44E-03 |
| 42 | GO:0031408: oxylipin biosynthetic process | 1.44E-03 |
| 43 | GO:0010118: stomatal movement | 1.89E-03 |
| 44 | GO:0042391: regulation of membrane potential | 1.89E-03 |
| 45 | GO:0006810: transport | 2.04E-03 |
| 46 | GO:0019252: starch biosynthetic process | 2.19E-03 |
| 47 | GO:0071805: potassium ion transmembrane transport | 2.72E-03 |
| 48 | GO:0015995: chlorophyll biosynthetic process | 3.28E-03 |
| 49 | GO:0018298: protein-chromophore linkage | 3.51E-03 |
| 50 | GO:0008219: cell death | 3.51E-03 |
| 51 | GO:0000160: phosphorelay signal transduction system | 3.63E-03 |
| 52 | GO:0010218: response to far red light | 3.76E-03 |
| 53 | GO:0006811: ion transport | 3.76E-03 |
| 54 | GO:0009853: photorespiration | 4.13E-03 |
| 55 | GO:0009867: jasmonic acid mediated signaling pathway | 4.13E-03 |
| 56 | GO:0034599: cellular response to oxidative stress | 4.26E-03 |
| 57 | GO:0009416: response to light stimulus | 4.40E-03 |
| 58 | GO:0042542: response to hydrogen peroxide | 4.77E-03 |
| 59 | GO:0010114: response to red light | 4.91E-03 |
| 60 | GO:0045893: positive regulation of transcription, DNA-templated | 5.05E-03 |
| 61 | GO:0009809: lignin biosynthetic process | 6.02E-03 |
| 62 | GO:0009585: red, far-red light phototransduction | 6.02E-03 |
| 63 | GO:0006813: potassium ion transport | 6.02E-03 |
| 64 | GO:0009909: regulation of flower development | 6.46E-03 |
| 65 | GO:0009058: biosynthetic process | 9.33E-03 |
| 66 | GO:0042744: hydrogen peroxide catabolic process | 9.85E-03 |
| 67 | GO:0016036: cellular response to phosphate starvation | 1.07E-02 |
| 68 | GO:0007623: circadian rhythm | 1.13E-02 |
| 69 | GO:0009409: response to cold | 1.21E-02 |
| 70 | GO:0005975: carbohydrate metabolic process | 1.35E-02 |
| 71 | GO:0046777: protein autophosphorylation | 1.88E-02 |
| 72 | GO:0044550: secondary metabolite biosynthetic process | 1.90E-02 |
| 73 | GO:0015979: photosynthesis | 1.97E-02 |
| 74 | GO:0045454: cell redox homeostasis | 2.03E-02 |
| 75 | GO:0006869: lipid transport | 2.17E-02 |
| 76 | GO:0009408: response to heat | 2.36E-02 |
| 77 | GO:0055114: oxidation-reduction process | 2.96E-02 |
| 78 | GO:0009735: response to cytokinin | 3.33E-02 |
| 79 | GO:0035556: intracellular signal transduction | 3.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046481: digalactosyldiacylglycerol synthase activity | 1.87E-05 |
| 2 | GO:0004328: formamidase activity | 1.87E-05 |
| 3 | GO:0046480: galactolipid galactosyltransferase activity | 1.87E-05 |
| 4 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 1.87E-05 |
| 5 | GO:0050347: trans-octaprenyltranstransferase activity | 4.85E-05 |
| 6 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 4.85E-05 |
| 7 | GO:0019156: isoamylase activity | 4.85E-05 |
| 8 | GO:0004096: catalase activity | 8.61E-05 |
| 9 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 8.61E-05 |
| 10 | GO:0009882: blue light photoreceptor activity | 1.30E-04 |
| 11 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.30E-04 |
| 12 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.30E-04 |
| 13 | GO:0035250: UDP-galactosyltransferase activity | 1.30E-04 |
| 14 | GO:0022890: inorganic cation transmembrane transporter activity | 1.30E-04 |
| 15 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.30E-04 |
| 16 | GO:0001053: plastid sigma factor activity | 1.78E-04 |
| 17 | GO:0008453: alanine-glyoxylate transaminase activity | 1.78E-04 |
| 18 | GO:0016987: sigma factor activity | 1.78E-04 |
| 19 | GO:0008519: ammonium transmembrane transporter activity | 2.85E-04 |
| 20 | GO:0000293: ferric-chelate reductase activity | 2.85E-04 |
| 21 | GO:0004556: alpha-amylase activity | 2.85E-04 |
| 22 | GO:0005242: inward rectifier potassium channel activity | 3.42E-04 |
| 23 | GO:0000989: transcription factor activity, transcription factor binding | 5.93E-04 |
| 24 | GO:0015386: potassium:proton antiporter activity | 8.02E-04 |
| 25 | GO:0000155: phosphorelay sensor kinase activity | 9.49E-04 |
| 26 | GO:0004565: beta-galactosidase activity | 9.49E-04 |
| 27 | GO:0042802: identical protein binding | 1.15E-03 |
| 28 | GO:0015079: potassium ion transmembrane transporter activity | 1.35E-03 |
| 29 | GO:0005249: voltage-gated potassium channel activity | 1.89E-03 |
| 30 | GO:0030551: cyclic nucleotide binding | 1.89E-03 |
| 31 | GO:0015299: solute:proton antiporter activity | 2.09E-03 |
| 32 | GO:0010181: FMN binding | 2.09E-03 |
| 33 | GO:0016887: ATPase activity | 3.85E-03 |
| 34 | GO:0050897: cobalt ion binding | 3.88E-03 |
| 35 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.18E-03 |
| 36 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.02E-03 |
| 37 | GO:0005506: iron ion binding | 8.75E-03 |
| 38 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.16E-03 |
| 39 | GO:0030170: pyridoxal phosphate binding | 9.68E-03 |
| 40 | GO:0005215: transporter activity | 9.84E-03 |
| 41 | GO:0020037: heme binding | 1.41E-02 |
| 42 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.15E-02 |
| 43 | GO:0030246: carbohydrate binding | 4.39E-02 |
| 44 | GO:0019825: oxygen binding | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.87E-07 |
| 2 | GO:0005960: glycine cleavage complex | 1.30E-04 |
| 3 | GO:0009707: chloroplast outer membrane | 1.72E-04 |
| 4 | GO:0031982: vesicle | 4.64E-04 |
| 5 | GO:0009514: glyoxysome | 5.27E-04 |
| 6 | GO:0005777: peroxisome | 6.27E-04 |
| 7 | GO:0042651: thylakoid membrane | 1.35E-03 |
| 8 | GO:0009532: plastid stroma | 1.44E-03 |
| 9 | GO:0031969: chloroplast membrane | 1.71E-03 |
| 10 | GO:0010319: stromule | 2.72E-03 |
| 11 | GO:0005887: integral component of plasma membrane | 3.38E-03 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 3.47E-03 |
| 13 | GO:0009706: chloroplast inner membrane | 7.69E-03 |
| 14 | GO:0010287: plastoglobule | 8.66E-03 |
| 15 | GO:0009941: chloroplast envelope | 8.87E-03 |
| 16 | GO:0005623: cell | 9.16E-03 |
| 17 | GO:0009570: chloroplast stroma | 1.36E-02 |
| 18 | GO:0048046: apoplast | 3.25E-02 |
| 19 | GO:0022626: cytosolic ribosome | 3.44E-02 |
| 20 | GO:0009534: chloroplast thylakoid | 4.07E-02 |
| 21 | GO:0005773: vacuole | 4.73E-02 |