GO Enrichment Analysis of Co-expressed Genes with
AT3G01970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1902325: negative regulation of chlorophyll biosynthetic process | 0.00E+00 |
| 2 | GO:0019458: methionine catabolic process via 2-oxobutanoate | 0.00E+00 |
| 3 | GO:0046680: response to DDT | 0.00E+00 |
| 4 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 5 | GO:1903647: negative regulation of chlorophyll catabolic process | 0.00E+00 |
| 6 | GO:0042362: fat-soluble vitamin biosynthetic process | 0.00E+00 |
| 7 | GO:0046177: D-gluconate catabolic process | 0.00E+00 |
| 8 | GO:0033542: fatty acid beta-oxidation, unsaturated, even number | 0.00E+00 |
| 9 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 10 | GO:0055114: oxidation-reduction process | 1.46E-09 |
| 11 | GO:0042744: hydrogen peroxide catabolic process | 8.28E-08 |
| 12 | GO:0006564: L-serine biosynthetic process | 3.50E-05 |
| 13 | GO:0006979: response to oxidative stress | 4.38E-05 |
| 14 | GO:0010019: chloroplast-nucleus signaling pathway | 7.27E-05 |
| 15 | GO:0009820: alkaloid metabolic process | 1.67E-04 |
| 16 | GO:0010365: positive regulation of ethylene biosynthetic process | 1.67E-04 |
| 17 | GO:0071266: 'de novo' L-methionine biosynthetic process | 1.67E-04 |
| 18 | GO:1901349: glucosinolate transport | 1.67E-04 |
| 19 | GO:0090449: phloem glucosinolate loading | 1.67E-04 |
| 20 | GO:0000032: cell wall mannoprotein biosynthetic process | 1.67E-04 |
| 21 | GO:0019343: cysteine biosynthetic process via cystathionine | 1.67E-04 |
| 22 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 1.67E-04 |
| 23 | GO:0009852: auxin catabolic process | 1.67E-04 |
| 24 | GO:0019346: transsulfuration | 1.67E-04 |
| 25 | GO:0015812: gamma-aminobutyric acid transport | 1.67E-04 |
| 26 | GO:0019605: butyrate metabolic process | 1.67E-04 |
| 27 | GO:0006083: acetate metabolic process | 1.67E-04 |
| 28 | GO:0006148: inosine catabolic process | 1.67E-04 |
| 29 | GO:0009817: defense response to fungus, incompatible interaction | 3.00E-04 |
| 30 | GO:0009651: response to salt stress | 3.47E-04 |
| 31 | GO:0002213: defense response to insect | 3.60E-04 |
| 32 | GO:2000379: positive regulation of reactive oxygen species metabolic process | 3.78E-04 |
| 33 | GO:0009915: phloem sucrose loading | 3.78E-04 |
| 34 | GO:0002215: defense response to nematode | 3.78E-04 |
| 35 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 3.78E-04 |
| 36 | GO:0005975: carbohydrate metabolic process | 6.15E-04 |
| 37 | GO:0044746: amino acid transmembrane export | 6.19E-04 |
| 38 | GO:0015692: lead ion transport | 6.19E-04 |
| 39 | GO:0033591: response to L-ascorbic acid | 6.19E-04 |
| 40 | GO:0009636: response to toxic substance | 6.56E-04 |
| 41 | GO:0048511: rhythmic process | 7.70E-04 |
| 42 | GO:0009809: lignin biosynthetic process | 8.23E-04 |
| 43 | GO:0051289: protein homotetramerization | 8.83E-04 |
| 44 | GO:0046836: glycolipid transport | 8.83E-04 |
| 45 | GO:0009413: response to flooding | 8.83E-04 |
| 46 | GO:0009298: GDP-mannose biosynthetic process | 8.83E-04 |
| 47 | GO:0009611: response to wounding | 1.12E-03 |
| 48 | GO:0042631: cellular response to water deprivation | 1.15E-03 |
| 49 | GO:0051365: cellular response to potassium ion starvation | 1.17E-03 |
| 50 | GO:0044550: secondary metabolite biosynthetic process | 1.23E-03 |
| 51 | GO:0006097: glyoxylate cycle | 1.48E-03 |
| 52 | GO:1901657: glycosyl compound metabolic process | 1.72E-03 |
| 53 | GO:0009058: biosynthetic process | 1.80E-03 |
| 54 | GO:0006828: manganese ion transport | 1.83E-03 |
| 55 | GO:0009228: thiamine biosynthetic process | 1.83E-03 |
| 56 | GO:0002238: response to molecule of fungal origin | 1.83E-03 |
| 57 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 1.83E-03 |
| 58 | GO:0015691: cadmium ion transport | 1.83E-03 |
| 59 | GO:0009648: photoperiodism | 2.19E-03 |
| 60 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.19E-03 |
| 61 | GO:0030643: cellular phosphate ion homeostasis | 2.19E-03 |
| 62 | GO:0010189: vitamin E biosynthetic process | 2.19E-03 |
| 63 | GO:0009554: megasporogenesis | 2.19E-03 |
| 64 | GO:0046686: response to cadmium ion | 2.32E-03 |
| 65 | GO:0010150: leaf senescence | 2.54E-03 |
| 66 | GO:0080027: response to herbivore | 2.58E-03 |
| 67 | GO:0050829: defense response to Gram-negative bacterium | 2.58E-03 |
| 68 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 2.58E-03 |
| 69 | GO:0022904: respiratory electron transport chain | 2.58E-03 |
| 70 | GO:0016311: dephosphorylation | 2.70E-03 |
| 71 | GO:0009642: response to light intensity | 2.99E-03 |
| 72 | GO:0006875: cellular metal ion homeostasis | 2.99E-03 |
| 73 | GO:0006102: isocitrate metabolic process | 2.99E-03 |
| 74 | GO:0009407: toxin catabolic process | 3.12E-03 |
| 75 | GO:0009617: response to bacterium | 3.17E-03 |
| 76 | GO:0010043: response to zinc ion | 3.27E-03 |
| 77 | GO:0007568: aging | 3.27E-03 |
| 78 | GO:0006972: hyperosmotic response | 3.41E-03 |
| 79 | GO:0015996: chlorophyll catabolic process | 3.41E-03 |
| 80 | GO:0006099: tricarboxylic acid cycle | 3.75E-03 |
| 81 | GO:0010112: regulation of systemic acquired resistance | 3.86E-03 |
| 82 | GO:0009060: aerobic respiration | 3.86E-03 |
| 83 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.33E-03 |
| 84 | GO:0042542: response to hydrogen peroxide | 4.43E-03 |
| 85 | GO:0010192: mucilage biosynthetic process | 4.81E-03 |
| 86 | GO:0009970: cellular response to sulfate starvation | 4.81E-03 |
| 87 | GO:0006032: chitin catabolic process | 4.81E-03 |
| 88 | GO:0006913: nucleocytoplasmic transport | 5.32E-03 |
| 89 | GO:0072593: reactive oxygen species metabolic process | 5.32E-03 |
| 90 | GO:0000272: polysaccharide catabolic process | 5.32E-03 |
| 91 | GO:0012501: programmed cell death | 5.84E-03 |
| 92 | GO:0006820: anion transport | 5.84E-03 |
| 93 | GO:0009725: response to hormone | 6.38E-03 |
| 94 | GO:0006807: nitrogen compound metabolic process | 6.38E-03 |
| 95 | GO:0009266: response to temperature stimulus | 6.93E-03 |
| 96 | GO:0002237: response to molecule of bacterial origin | 6.93E-03 |
| 97 | GO:0042343: indole glucosinolate metabolic process | 7.50E-03 |
| 98 | GO:0019853: L-ascorbic acid biosynthetic process | 7.50E-03 |
| 99 | GO:0019762: glucosinolate catabolic process | 8.10E-03 |
| 100 | GO:0000162: tryptophan biosynthetic process | 8.10E-03 |
| 101 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.10E-03 |
| 102 | GO:0009833: plant-type primary cell wall biogenesis | 8.10E-03 |
| 103 | GO:0006869: lipid transport | 8.20E-03 |
| 104 | GO:0009624: response to nematode | 8.84E-03 |
| 105 | GO:0098542: defense response to other organism | 9.97E-03 |
| 106 | GO:0015992: proton transport | 9.97E-03 |
| 107 | GO:0030245: cellulose catabolic process | 1.06E-02 |
| 108 | GO:0010017: red or far-red light signaling pathway | 1.06E-02 |
| 109 | GO:0016226: iron-sulfur cluster assembly | 1.06E-02 |
| 110 | GO:0009625: response to insect | 1.13E-02 |
| 111 | GO:0010089: xylem development | 1.20E-02 |
| 112 | GO:0009561: megagametogenesis | 1.20E-02 |
| 113 | GO:0010118: stomatal movement | 1.34E-02 |
| 114 | GO:0000271: polysaccharide biosynthetic process | 1.34E-02 |
| 115 | GO:0071555: cell wall organization | 1.37E-02 |
| 116 | GO:0010154: fruit development | 1.41E-02 |
| 117 | GO:0006885: regulation of pH | 1.41E-02 |
| 118 | GO:0006520: cellular amino acid metabolic process | 1.41E-02 |
| 119 | GO:0009646: response to absence of light | 1.49E-02 |
| 120 | GO:0006623: protein targeting to vacuole | 1.56E-02 |
| 121 | GO:0055072: iron ion homeostasis | 1.56E-02 |
| 122 | GO:0000302: response to reactive oxygen species | 1.64E-02 |
| 123 | GO:0030163: protein catabolic process | 1.80E-02 |
| 124 | GO:0010252: auxin homeostasis | 1.88E-02 |
| 125 | GO:0009615: response to virus | 2.13E-02 |
| 126 | GO:0009816: defense response to bacterium, incompatible interaction | 2.22E-02 |
| 127 | GO:0009627: systemic acquired resistance | 2.30E-02 |
| 128 | GO:0030244: cellulose biosynthetic process | 2.57E-02 |
| 129 | GO:0008219: cell death | 2.57E-02 |
| 130 | GO:0009813: flavonoid biosynthetic process | 2.67E-02 |
| 131 | GO:0009723: response to ethylene | 2.75E-02 |
| 132 | GO:0006811: ion transport | 2.76E-02 |
| 133 | GO:0030001: metal ion transport | 3.34E-02 |
| 134 | GO:0006631: fatty acid metabolic process | 3.44E-02 |
| 135 | GO:0008283: cell proliferation | 3.65E-02 |
| 136 | GO:0009744: response to sucrose | 3.65E-02 |
| 137 | GO:0006855: drug transmembrane transport | 4.07E-02 |
| 138 | GO:0031347: regulation of defense response | 4.18E-02 |
| 139 | GO:0006812: cation transport | 4.29E-02 |
| 140 | GO:0009664: plant-type cell wall organization | 4.29E-02 |
| 141 | GO:0006486: protein glycosylation | 4.51E-02 |
| 142 | GO:0006813: potassium ion transport | 4.51E-02 |
| 143 | GO:0042742: defense response to bacterium | 4.72E-02 |
| 144 | GO:0006857: oligopeptide transport | 4.73E-02 |
| 145 | GO:0008152: metabolic process | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018826: methionine gamma-lyase activity | 0.00E+00 |
| 2 | GO:0046316: gluconokinase activity | 0.00E+00 |
| 3 | GO:0047782: coniferin beta-glucosidase activity | 0.00E+00 |
| 4 | GO:0032441: pheophorbide a oxygenase activity | 0.00E+00 |
| 5 | GO:0010176: homogentisate phytyltransferase activity | 0.00E+00 |
| 6 | GO:0003796: lysozyme activity | 0.00E+00 |
| 7 | GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 8 | GO:0020037: heme binding | 5.69E-09 |
| 9 | GO:0004601: peroxidase activity | 4.03E-08 |
| 10 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.35E-06 |
| 11 | GO:0008422: beta-glucosidase activity | 3.64E-05 |
| 12 | GO:0046872: metal ion binding | 1.29E-04 |
| 13 | GO:0004123: cystathionine gamma-lyase activity | 1.67E-04 |
| 14 | GO:0003987: acetate-CoA ligase activity | 1.67E-04 |
| 15 | GO:0046906: tetrapyrrole binding | 1.67E-04 |
| 16 | GO:0070401: NADP+ binding | 1.67E-04 |
| 17 | GO:0004048: anthranilate phosphoribosyltransferase activity | 1.67E-04 |
| 18 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 1.67E-04 |
| 19 | GO:0045437: uridine nucleosidase activity | 1.67E-04 |
| 20 | GO:0047760: butyrate-CoA ligase activity | 1.67E-04 |
| 21 | GO:0004476: mannose-6-phosphate isomerase activity | 1.67E-04 |
| 22 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.67E-04 |
| 23 | GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | 1.67E-04 |
| 24 | GO:0090448: glucosinolate:proton symporter activity | 1.67E-04 |
| 25 | GO:0016229: steroid dehydrogenase activity | 1.67E-04 |
| 26 | GO:0102483: scopolin beta-glucosidase activity | 2.61E-04 |
| 27 | GO:0004047: aminomethyltransferase activity | 3.78E-04 |
| 28 | GO:0047724: inosine nucleosidase activity | 3.78E-04 |
| 29 | GO:0047517: 1,4-beta-D-xylan synthase activity | 3.78E-04 |
| 30 | GO:0019172: glyoxalase III activity | 3.78E-04 |
| 31 | GO:0008517: folic acid transporter activity | 3.78E-04 |
| 32 | GO:0004566: beta-glucuronidase activity | 3.78E-04 |
| 33 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.10E-04 |
| 34 | GO:0004867: serine-type endopeptidase inhibitor activity | 5.19E-04 |
| 35 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.19E-04 |
| 36 | GO:0003962: cystathionine gamma-synthase activity | 6.19E-04 |
| 37 | GO:0051287: NAD binding | 7.20E-04 |
| 38 | GO:0017089: glycolipid transporter activity | 8.83E-04 |
| 39 | GO:0015186: L-glutamine transmembrane transporter activity | 8.83E-04 |
| 40 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 8.83E-04 |
| 41 | GO:0051861: glycolipid binding | 1.17E-03 |
| 42 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 1.17E-03 |
| 43 | GO:0050302: indole-3-acetaldehyde oxidase activity | 1.17E-03 |
| 44 | GO:0004659: prenyltransferase activity | 1.17E-03 |
| 45 | GO:0005199: structural constituent of cell wall | 1.24E-03 |
| 46 | GO:0000104: succinate dehydrogenase activity | 1.48E-03 |
| 47 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 1.48E-03 |
| 48 | GO:0005496: steroid binding | 1.48E-03 |
| 49 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.48E-03 |
| 50 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.60E-03 |
| 51 | GO:0016791: phosphatase activity | 1.83E-03 |
| 52 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.83E-03 |
| 53 | GO:0016208: AMP binding | 1.83E-03 |
| 54 | GO:0004462: lactoylglutathione lyase activity | 1.83E-03 |
| 55 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.83E-03 |
| 56 | GO:0004866: endopeptidase inhibitor activity | 1.83E-03 |
| 57 | GO:0008200: ion channel inhibitor activity | 1.83E-03 |
| 58 | GO:0016597: amino acid binding | 2.06E-03 |
| 59 | GO:0009055: electron carrier activity | 2.18E-03 |
| 60 | GO:0051213: dioxygenase activity | 2.18E-03 |
| 61 | GO:0004602: glutathione peroxidase activity | 2.19E-03 |
| 62 | GO:0004721: phosphoprotein phosphatase activity | 2.56E-03 |
| 63 | GO:0015103: inorganic anion transmembrane transporter activity | 2.58E-03 |
| 64 | GO:0015288: porin activity | 2.99E-03 |
| 65 | GO:0004033: aldo-keto reductase (NADP) activity | 2.99E-03 |
| 66 | GO:0008308: voltage-gated anion channel activity | 3.41E-03 |
| 67 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.58E-03 |
| 68 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 3.86E-03 |
| 69 | GO:0005384: manganese ion transmembrane transporter activity | 4.33E-03 |
| 70 | GO:0016844: strictosidine synthase activity | 4.33E-03 |
| 71 | GO:0004364: glutathione transferase activity | 4.43E-03 |
| 72 | GO:0004568: chitinase activity | 4.81E-03 |
| 73 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.99E-03 |
| 74 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.32E-03 |
| 75 | GO:0008559: xenobiotic-transporting ATPase activity | 5.32E-03 |
| 76 | GO:0016740: transferase activity | 6.35E-03 |
| 77 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.38E-03 |
| 78 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.93E-03 |
| 79 | GO:0008061: chitin binding | 7.50E-03 |
| 80 | GO:0004190: aspartic-type endopeptidase activity | 7.50E-03 |
| 81 | GO:0019825: oxygen binding | 8.02E-03 |
| 82 | GO:0004725: protein tyrosine phosphatase activity | 8.10E-03 |
| 83 | GO:0051536: iron-sulfur cluster binding | 8.70E-03 |
| 84 | GO:0015035: protein disulfide oxidoreductase activity | 9.10E-03 |
| 85 | GO:0035251: UDP-glucosyltransferase activity | 9.97E-03 |
| 86 | GO:0004540: ribonuclease activity | 9.97E-03 |
| 87 | GO:0008810: cellulase activity | 1.13E-02 |
| 88 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.13E-02 |
| 89 | GO:0030170: pyridoxal phosphate binding | 1.23E-02 |
| 90 | GO:0005506: iron ion binding | 1.33E-02 |
| 91 | GO:0005451: monovalent cation:proton antiporter activity | 1.34E-02 |
| 92 | GO:0046873: metal ion transmembrane transporter activity | 1.41E-02 |
| 93 | GO:0008289: lipid binding | 1.45E-02 |
| 94 | GO:0015299: solute:proton antiporter activity | 1.49E-02 |
| 95 | GO:0008194: UDP-glycosyltransferase activity | 1.72E-02 |
| 96 | GO:0015385: sodium:proton antiporter activity | 1.80E-02 |
| 97 | GO:0016759: cellulose synthase activity | 1.88E-02 |
| 98 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.39E-02 |
| 99 | GO:0030145: manganese ion binding | 2.85E-02 |
| 100 | GO:0005507: copper ion binding | 3.06E-02 |
| 101 | GO:0003993: acid phosphatase activity | 3.14E-02 |
| 102 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.34E-02 |
| 103 | GO:0004722: protein serine/threonine phosphatase activity | 3.86E-02 |
| 104 | GO:0008234: cysteine-type peptidase activity | 4.84E-02 |
| 105 | GO:0045330: aspartyl esterase activity | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005576: extracellular region | 4.54E-07 |
| 2 | GO:0045281: succinate dehydrogenase complex | 3.78E-04 |
| 3 | GO:0005774: vacuolar membrane | 3.79E-04 |
| 4 | GO:0009530: primary cell wall | 6.19E-04 |
| 5 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 1.17E-03 |
| 6 | GO:0005777: peroxisome | 1.36E-03 |
| 7 | GO:0055035: plastid thylakoid membrane | 1.48E-03 |
| 8 | GO:0005618: cell wall | 1.67E-03 |
| 9 | GO:0009986: cell surface | 2.58E-03 |
| 10 | GO:0045273: respiratory chain complex II | 2.99E-03 |
| 11 | GO:0000325: plant-type vacuole | 3.27E-03 |
| 12 | GO:0046930: pore complex | 3.41E-03 |
| 13 | GO:0005829: cytosol | 4.54E-03 |
| 14 | GO:0005765: lysosomal membrane | 5.32E-03 |
| 15 | GO:0030176: integral component of endoplasmic reticulum membrane | 7.50E-03 |
| 16 | GO:0005758: mitochondrial intermembrane space | 8.70E-03 |
| 17 | GO:0070469: respiratory chain | 9.33E-03 |
| 18 | GO:0005741: mitochondrial outer membrane | 9.97E-03 |
| 19 | GO:0009506: plasmodesma | 1.18E-02 |
| 20 | GO:0005770: late endosome | 1.41E-02 |
| 21 | GO:0031965: nuclear membrane | 1.56E-02 |
| 22 | GO:0005615: extracellular space | 1.72E-02 |
| 23 | GO:0071944: cell periphery | 1.80E-02 |
| 24 | GO:0009536: plastid | 1.86E-02 |
| 25 | GO:0005794: Golgi apparatus | 2.46E-02 |
| 26 | GO:0005773: vacuole | 2.50E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 2.57E-02 |
| 28 | GO:0031969: chloroplast membrane | 2.95E-02 |
| 29 | GO:0005886: plasma membrane | 3.00E-02 |
| 30 | GO:0031225: anchored component of membrane | 3.43E-02 |
| 31 | GO:0031966: mitochondrial membrane | 4.29E-02 |
| 32 | GO:0000502: proteasome complex | 4.51E-02 |
| 33 | GO:0005635: nuclear envelope | 4.73E-02 |