co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G01820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001143: N-methylnicotinate transport	0.00E+00
2	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
3	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
4	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
5	GO:0006862: nucleotide transport	0.00E+00
6	GO:2001142: nicotinate transport	0.00E+00
7	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
8	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
9	GO:0009268: response to pH	0.00E+00
10	GO:0032499: detection of peptidoglycan	0.00E+00
11	GO:0010200: response to chitin	8.57E-09
12	GO:0009611: response to wounding	7.66E-07
13	GO:0006468: protein phosphorylation	4.75E-06
14	GO:0002679: respiratory burst involved in defense response	2.80E-05
15	GO:0045227: capsule polysaccharide biosynthetic process	5.05E-05
16	GO:0033358: UDP-L-arabinose biosynthetic process	5.05E-05
17	GO:0034440: lipid oxidation	5.05E-05
18	GO:0042742: defense response to bacterium	8.05E-05
19	GO:0009695: jasmonic acid biosynthetic process	1.06E-04
20	GO:0080086: stamen filament development	1.60E-04
21	GO:0006955: immune response	2.10E-04
22	GO:0045010: actin nucleation	2.66E-04
23	GO:0051180: vitamin transport	2.75E-04
24	GO:0010482: regulation of epidermal cell division	2.75E-04
25	GO:0007229: integrin-mediated signaling pathway	2.75E-04
26	GO:0030974: thiamine pyrophosphate transport	2.75E-04
27	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.75E-04
28	GO:0050691: regulation of defense response to virus by host	2.75E-04
29	GO:0032491: detection of molecule of fungal origin	2.75E-04
30	GO:1900384: regulation of flavonol biosynthetic process	2.75E-04
31	GO:0006083: acetate metabolic process	2.75E-04
32	GO:0009699: phenylpropanoid biosynthetic process	3.27E-04
33	GO:0009753: response to jasmonic acid	3.61E-04
34	GO:0051865: protein autoubiquitination	3.94E-04
35	GO:0042754: negative regulation of circadian rhythm	6.04E-04
36	GO:0010372: positive regulation of gibberellin biosynthetic process	6.04E-04
37	GO:0015893: drug transport	6.04E-04
38	GO:0008219: cell death	7.45E-04
39	GO:0055046: microgametogenesis	8.15E-04
40	GO:0034605: cellular response to heat	9.17E-04
41	GO:0010447: response to acidic pH	9.79E-04
42	GO:0080168: abscisic acid transport	9.79E-04
43	GO:0010366: negative regulation of ethylene biosynthetic process	9.79E-04
44	GO:0009225: nucleotide-sugar metabolic process	1.02E-03
45	GO:0009901: anther dehiscence	1.02E-03
46	GO:0046686: response to cadmium ion	1.02E-03
47	GO:0006839: mitochondrial transport	1.18E-03
48	GO:0006952: defense response	1.32E-03
49	GO:0043207: response to external biotic stimulus	1.40E-03
50	GO:0030100: regulation of endocytosis	1.40E-03
51	GO:0009399: nitrogen fixation	1.40E-03
52	GO:0033014: tetrapyrrole biosynthetic process	1.40E-03
53	GO:0071323: cellular response to chitin	1.40E-03
54	GO:0046836: glycolipid transport	1.40E-03
55	GO:0031408: oxylipin biosynthetic process	1.52E-03
56	GO:0006012: galactose metabolic process	1.81E-03
57	GO:0009686: gibberellin biosynthetic process	1.81E-03
58	GO:0040007: growth	1.81E-03
59	GO:0015743: malate transport	1.87E-03
60	GO:0010107: potassium ion import	1.87E-03
61	GO:0071219: cellular response to molecule of bacterial origin	1.87E-03
62	GO:0051567: histone H3-K9 methylation	1.87E-03
63	GO:1902347: response to strigolactone	1.87E-03
64	GO:0009306: protein secretion	1.97E-03
65	GO:0009737: response to abscisic acid	2.15E-03
66	GO:0048653: anther development	2.30E-03
67	GO:0009164: nucleoside catabolic process	2.39E-03
68	GO:2000762: regulation of phenylpropanoid metabolic process	2.39E-03
69	GO:0045487: gibberellin catabolic process	2.39E-03
70	GO:0030041: actin filament polymerization	2.39E-03
71	GO:0006970: response to osmotic stress	2.60E-03
72	GO:0048544: recognition of pollen	2.67E-03
73	GO:0009620: response to fungus	2.79E-03
74	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.95E-03
75	GO:0048317: seed morphogenesis	2.95E-03
76	GO:0006828: manganese ion transport	2.95E-03
77	GO:0006796: phosphate-containing compound metabolic process	2.95E-03
78	GO:1900425: negative regulation of defense response to bacterium	2.95E-03
79	GO:0010337: regulation of salicylic acid metabolic process	2.95E-03
80	GO:0006014: D-ribose metabolic process	2.95E-03
81	GO:0015691: cadmium ion transport	2.95E-03
82	GO:0006751: glutathione catabolic process	2.95E-03
83	GO:0002229: defense response to oomycetes	3.06E-03
84	GO:0009742: brassinosteroid mediated signaling pathway	3.37E-03
85	GO:0046777: protein autophosphorylation	3.58E-03
86	GO:0009555: pollen development	3.79E-03
87	GO:0006979: response to oxidative stress	4.08E-03
88	GO:0035556: intracellular signal transduction	4.17E-03
89	GO:0010161: red light signaling pathway	4.19E-03
90	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.19E-03
91	GO:0010044: response to aluminum ion	4.19E-03
92	GO:0001666: response to hypoxia	4.42E-03
93	GO:0009845: seed germination	4.61E-03
94	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.67E-03
95	GO:0006402: mRNA catabolic process	4.86E-03
96	GO:1900150: regulation of defense response to fungus	4.86E-03
97	GO:0006605: protein targeting	4.86E-03
98	GO:2000070: regulation of response to water deprivation	4.86E-03
99	GO:0048658: anther wall tapetum development	4.86E-03
100	GO:0009932: cell tip growth	5.57E-03
101	GO:0009751: response to salicylic acid	5.72E-03
102	GO:0009817: defense response to fungus, incompatible interaction	5.76E-03
103	GO:0010311: lateral root formation	6.05E-03
104	GO:0090333: regulation of stomatal closure	6.31E-03
105	GO:0006783: heme biosynthetic process	6.31E-03
106	GO:0006779: porphyrin-containing compound biosynthetic process	7.09E-03
107	GO:0009086: methionine biosynthetic process	7.09E-03
108	GO:0008202: steroid metabolic process	7.09E-03
109	GO:0045087: innate immune response	7.30E-03
110	GO:0006470: protein dephosphorylation	7.46E-03
111	GO:0007166: cell surface receptor signaling pathway	7.46E-03
112	GO:0009617: response to bacterium	7.87E-03
113	GO:0006782: protoporphyrinogen IX biosynthetic process	7.90E-03
114	GO:0019538: protein metabolic process	7.90E-03
115	GO:0007064: mitotic sister chromatid cohesion	7.90E-03
116	GO:0048829: root cap development	7.90E-03
117	GO:0016310: phosphorylation	8.45E-03
118	GO:0010015: root morphogenesis	8.74E-03
119	GO:0006816: calcium ion transport	8.74E-03
120	GO:0015770: sucrose transport	8.74E-03
121	GO:1903507: negative regulation of nucleic acid-templated transcription	8.74E-03
122	GO:0048765: root hair cell differentiation	8.74E-03
123	GO:0006357: regulation of transcription from RNA polymerase II promoter	8.94E-03
124	GO:0000266: mitochondrial fission	9.61E-03
125	GO:0010152: pollen maturation	9.61E-03
126	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.61E-03
127	GO:0018107: peptidyl-threonine phosphorylation	1.05E-02
128	GO:0031347: regulation of defense response	1.14E-02
129	GO:0002237: response to molecule of bacterial origin	1.14E-02
130	GO:0005985: sucrose metabolic process	1.24E-02
131	GO:0009414: response to water deprivation	1.24E-02
132	GO:0071732: cellular response to nitric oxide	1.24E-02
133	GO:0090351: seedling development	1.24E-02
134	GO:0009809: lignin biosynthetic process	1.27E-02
135	GO:0010224: response to UV-B	1.32E-02
136	GO:0009863: salicylic acid mediated signaling pathway	1.44E-02
137	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.51E-02
138	GO:0010026: trichome differentiation	1.55E-02
139	GO:0043622: cortical microtubule organization	1.55E-02
140	GO:0009651: response to salt stress	1.64E-02
141	GO:0098542: defense response to other organism	1.65E-02
142	GO:0016998: cell wall macromolecule catabolic process	1.65E-02
143	GO:0030245: cellulose catabolic process	1.76E-02
144	GO:0016226: iron-sulfur cluster assembly	1.76E-02
145	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.76E-02
146	GO:0030433: ubiquitin-dependent ERAD pathway	1.76E-02
147	GO:0007005: mitochondrion organization	1.76E-02
148	GO:0071215: cellular response to abscisic acid stimulus	1.88E-02
149	GO:0071369: cellular response to ethylene stimulus	1.88E-02
150	GO:0006817: phosphate ion transport	1.99E-02
151	GO:0019722: calcium-mediated signaling	1.99E-02
152	GO:0055085: transmembrane transport	1.99E-02
153	GO:0010118: stomatal movement	2.23E-02
154	GO:0042631: cellular response to water deprivation	2.23E-02
155	GO:0009960: endosperm development	2.35E-02
156	GO:0048868: pollen tube development	2.35E-02
157	GO:0009749: response to glucose	2.60E-02
158	GO:0019252: starch biosynthetic process	2.60E-02
159	GO:0010193: response to ozone	2.73E-02
160	GO:0031047: gene silencing by RNA	2.86E-02
161	GO:1901657: glycosyl compound metabolic process	2.99E-02
162	GO:0071281: cellular response to iron ion	2.99E-02
163	GO:0010090: trichome morphogenesis	2.99E-02
164	GO:0019760: glucosinolate metabolic process	3.13E-02
165	GO:0009639: response to red or far red light	3.13E-02
166	GO:0009873: ethylene-activated signaling pathway	3.24E-02
167	GO:0016567: protein ubiquitination	3.40E-02
168	GO:0016579: protein deubiquitination	3.41E-02
169	GO:0009615: response to virus	3.55E-02
170	GO:0010468: regulation of gene expression	3.75E-02
171	GO:0015995: chlorophyll biosynthetic process	3.99E-02
172	GO:0048573: photoperiodism, flowering	3.99E-02
173	GO:0016049: cell growth	4.14E-02
174	GO:0006351: transcription, DNA-templated	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0090416: nicotinate transporter activity	0.00E+00
3	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
6	GO:2001080: chitosan binding	0.00E+00
7	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
8	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
9	GO:0016301: kinase activity	7.57E-07
10	GO:0016165: linoleate 13S-lipoxygenase activity	1.24E-05
11	GO:0050373: UDP-arabinose 4-epimerase activity	5.05E-05
12	GO:0004672: protein kinase activity	6.36E-05
13	GO:0005524: ATP binding	7.58E-05
14	GO:0047631: ADP-ribose diphosphatase activity	8.02E-05
15	GO:0004674: protein serine/threonine kinase activity	1.10E-04
16	GO:0003978: UDP-glucose 4-epimerase activity	1.60E-04
17	GO:0003987: acetate-CoA ligase activity	2.75E-04
18	GO:0090422: thiamine pyrophosphate transporter activity	2.75E-04
19	GO:0090440: abscisic acid transporter activity	2.75E-04
20	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.75E-04
21	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	6.04E-04
22	GO:1990585: hydroxyproline O-arabinosyltransferase activity	6.04E-04
23	GO:0004103: choline kinase activity	6.04E-04
24	GO:0008883: glutamyl-tRNA reductase activity	6.04E-04
25	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.93E-04
26	GO:0003840: gamma-glutamyltransferase activity	9.79E-04
27	GO:0036374: glutathione hydrolase activity	9.79E-04
28	GO:0046423: allene-oxide cyclase activity	9.79E-04
29	GO:0004383: guanylate cyclase activity	9.79E-04
30	GO:0043565: sequence-specific DNA binding	1.04E-03
31	GO:0017089: glycolipid transporter activity	1.40E-03
32	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.40E-03
33	GO:0001653: peptide receptor activity	1.40E-03
34	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.40E-03
35	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.40E-03
36	GO:0051861: glycolipid binding	1.87E-03
37	GO:0015369: calcium:proton antiporter activity	1.87E-03
38	GO:0043015: gamma-tubulin binding	1.87E-03
39	GO:0019199: transmembrane receptor protein kinase activity	1.87E-03
40	GO:0005253: anion channel activity	1.87E-03
41	GO:0015368: calcium:cation antiporter activity	1.87E-03
42	GO:0002020: protease binding	2.39E-03
43	GO:0004356: glutamate-ammonia ligase activity	2.39E-03
44	GO:0035673: oligopeptide transmembrane transporter activity	2.95E-03
45	GO:0000210: NAD+ diphosphatase activity	2.95E-03
46	GO:0016208: AMP binding	2.95E-03
47	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	3.55E-03
48	GO:0004747: ribokinase activity	3.55E-03
49	GO:0019900: kinase binding	3.55E-03
50	GO:0044212: transcription regulatory region DNA binding	4.02E-03
51	GO:0004143: diacylglycerol kinase activity	4.19E-03
52	GO:0008506: sucrose:proton symporter activity	4.19E-03
53	GO:0004427: inorganic diphosphatase activity	4.19E-03
54	GO:0016621: cinnamoyl-CoA reductase activity	4.19E-03
55	GO:0015140: malate transmembrane transporter activity	4.19E-03
56	GO:0008143: poly(A) binding	4.19E-03
57	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.25E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	4.86E-03
59	GO:0008865: fructokinase activity	4.86E-03
60	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.86E-03
61	GO:0004722: protein serine/threonine phosphatase activity	4.89E-03
62	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	5.00E-03
63	GO:0008142: oxysterol binding	5.57E-03
64	GO:0003951: NAD+ kinase activity	5.57E-03
65	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.75E-03
66	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.76E-03
67	GO:0016207: 4-coumarate-CoA ligase activity	6.31E-03
68	GO:0047617: acyl-CoA hydrolase activity	7.09E-03
69	GO:0004712: protein serine/threonine/tyrosine kinase activity	7.98E-03
70	GO:0004860: protein kinase inhibitor activity	8.74E-03
71	GO:0008515: sucrose transmembrane transporter activity	8.74E-03
72	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.61E-03
73	GO:0015198: oligopeptide transporter activity	9.61E-03
74	GO:0019888: protein phosphatase regulator activity	1.05E-02
75	GO:0008061: chitin binding	1.24E-02
76	GO:0050660: flavin adenine dinucleotide binding	1.32E-02
77	GO:0003714: transcription corepressor activity	1.44E-02
78	GO:0004707: MAP kinase activity	1.65E-02
79	GO:0033612: receptor serine/threonine kinase binding	1.65E-02
80	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.65E-02
81	GO:0003779: actin binding	1.76E-02
82	GO:0022891: substrate-specific transmembrane transporter activity	1.88E-02
83	GO:0004842: ubiquitin-protein transferase activity	2.25E-02
84	GO:0016853: isomerase activity	2.47E-02
85	GO:0050662: coenzyme binding	2.47E-02
86	GO:0005516: calmodulin binding	2.56E-02
87	GO:0009055: electron carrier activity	2.58E-02
88	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.73E-02
89	GO:0015144: carbohydrate transmembrane transporter activity	2.73E-02
90	GO:0004518: nuclease activity	2.86E-02
91	GO:0051015: actin filament binding	2.99E-02
92	GO:0015297: antiporter activity	3.00E-02
93	GO:0005351: sugar:proton symporter activity	3.07E-02
94	GO:0008017: microtubule binding	3.29E-02
95	GO:0102483: scopolin beta-glucosidase activity	3.99E-02
96	GO:0004721: phosphoprotein phosphatase activity	3.99E-02
97	GO:0030247: polysaccharide binding	3.99E-02
98	GO:0046872: metal ion binding	4.02E-02
99	GO:0015238: drug transmembrane transporter activity	4.44E-02
100	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.00E-07
2	GO:0005911: cell-cell junction	2.75E-04
3	GO:0016442: RISC complex	2.75E-04
4	GO:0019008: molybdopterin synthase complex	2.75E-04
5	GO:0010494: cytoplasmic stress granule	3.94E-04
6	GO:0090404: pollen tube tip	6.30E-04
7	GO:0090406: pollen tube	1.37E-03
8	GO:0016021: integral component of membrane	2.49E-03
9	GO:0009506: plasmodesma	3.38E-03
10	GO:0016363: nuclear matrix	3.55E-03
11	GO:0032580: Golgi cisterna membrane	3.70E-03
12	GO:0009514: glyoxysome	5.57E-03
13	GO:0000159: protein phosphatase type 2A complex	8.74E-03
14	GO:0071013: catalytic step 2 spliceosome	8.74E-03
15	GO:0048471: perinuclear region of cytoplasm	8.74E-03
16	GO:0005938: cell cortex	1.05E-02
17	GO:0043234: protein complex	1.34E-02
18	GO:0005758: mitochondrial intermembrane space	1.44E-02
19	GO:0010008: endosome membrane	1.56E-02
20	GO:0030136: clathrin-coated vesicle	2.11E-02
21	GO:0005743: mitochondrial inner membrane	2.15E-02
22	GO:0005770: late endosome	2.35E-02
23	GO:0009524: phragmoplast	2.40E-02
24	GO:0009504: cell plate	2.60E-02
25	GO:0009705: plant-type vacuole membrane	3.14E-02
26	GO:0005829: cytosol	3.34E-02
27	GO:0005768: endosome	3.39E-02
28	GO:0000932: P-body	3.55E-02
29	GO:0019005: SCF ubiquitin ligase complex	4.29E-02