Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G01800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0039694: viral RNA genome replication0.00E+00
2GO:0090070: positive regulation of ribosome biogenesis0.00E+00
3GO:0006364: rRNA processing1.45E-09
4GO:0010501: RNA secondary structure unwinding5.13E-07
5GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.74E-06
6GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine1.67E-05
7GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery1.67E-05
8GO:0043985: histone H4-R3 methylation1.67E-05
9GO:0036228: protein targeting to nuclear inner membrane1.67E-05
10GO:0048825: cotyledon development6.79E-05
11GO:0045604: regulation of epidermal cell differentiation7.77E-05
12GO:0046345: abscisic acid catabolic process1.61E-04
13GO:0006405: RNA export from nucleus2.09E-04
14GO:0048444: floral organ morphogenesis3.11E-04
15GO:0010077: maintenance of inflorescence meristem identity3.11E-04
16GO:0045995: regulation of embryonic development3.66E-04
17GO:0000028: ribosomal small subunit assembly4.23E-04
18GO:0019827: stem cell population maintenance4.23E-04
19GO:0009880: embryonic pattern specification4.82E-04
20GO:0001708: cell fate specification5.42E-04
21GO:2000024: regulation of leaf development5.42E-04
22GO:0006349: regulation of gene expression by genetic imprinting6.04E-04
23GO:0006913: nucleocytoplasmic transport7.34E-04
24GO:0010582: floral meristem determinacy8.01E-04
25GO:0009451: RNA modification8.22E-04
26GO:2000012: regulation of auxin polar transport8.70E-04
27GO:0010030: positive regulation of seed germination1.01E-03
28GO:0042254: ribosome biogenesis1.24E-03
29GO:0006606: protein import into nucleus1.73E-03
30GO:0009960: endosperm development1.82E-03
31GO:0010305: leaf vascular tissue pattern formation1.82E-03
32GO:0009926: auxin polar transport4.47E-03
33GO:0006260: DNA replication5.09E-03
34GO:0006417: regulation of translation5.88E-03
35GO:0009553: embryo sac development6.84E-03
36GO:0009790: embryo development9.10E-03
37GO:0007166: cell surface receptor signaling pathway1.12E-02
38GO:0048366: leaf development1.56E-02
39GO:0009793: embryo development ending in seed dormancy1.80E-02
40GO:0045892: negative regulation of transcription, DNA-templated1.86E-02
41GO:0032259: methylation2.07E-02
42GO:0048364: root development2.21E-02
43GO:0051301: cell division3.42E-02
RankGO TermAdjusted P value
1GO:0004164: diphthine synthase activity0.00E+00
2GO:0000166: nucleotide binding8.06E-10
3GO:0004004: ATP-dependent RNA helicase activity1.90E-08
4GO:0030515: snoRNA binding2.45E-06
5GO:0001054: RNA polymerase I activity1.03E-05
6GO:0008026: ATP-dependent helicase activity2.09E-05
7GO:0003723: RNA binding1.04E-04
8GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.37E-04
9GO:0043022: ribosome binding4.23E-04
10GO:0017056: structural constituent of nuclear pore4.23E-04
11GO:0005487: nucleocytoplasmic transporter activity6.04E-04
12GO:0001056: RNA polymerase III activity8.01E-04
13GO:0003887: DNA-directed DNA polymerase activity1.08E-03
14GO:0004519: endonuclease activity2.37E-03
15GO:0000987: core promoter proximal region sequence-specific DNA binding3.87E-03
16GO:0005525: GTP binding6.28E-03
17GO:0004386: helicase activity7.42E-03
18GO:0008168: methyltransferase activity1.36E-02
19GO:0016787: hydrolase activity1.66E-02
20GO:0003677: DNA binding2.41E-02
21GO:0016887: ATPase activity2.92E-02
22GO:0005524: ATP binding3.78E-02
RankGO TermAdjusted P value
1GO:0034455: t-UTP complex0.00E+00
2GO:0034388: Pwp2p-containing subcomplex of 90S preribosome0.00E+00
3GO:0019034: viral replication complex0.00E+00
4GO:0005730: nucleolus6.25E-11
5GO:0005634: nucleus3.88E-06
6GO:0005736: DNA-directed RNA polymerase I complex5.52E-06
7GO:0032040: small-subunit processome1.22E-05
8GO:0044611: nuclear pore inner ring1.67E-05
9GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.00E-04
10GO:0005666: DNA-directed RNA polymerase III complex6.04E-04
11GO:0043234: protein complex1.08E-03
12GO:0005643: nuclear pore3.20E-03
13GO:0005834: heterotrimeric G-protein complex6.42E-03
14GO:0009506: plasmodesma2.75E-02
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Gene type



Gene DE type