co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G01590

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019428: allantoin biosynthetic process	0.00E+00
2	GO:0006721: terpenoid metabolic process	0.00E+00
3	GO:0006069: ethanol oxidation	0.00E+00
4	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
5	GO:0006720: isoprenoid metabolic process	0.00E+00
6	GO:0048870: cell motility	0.00E+00
7	GO:0016487: farnesol metabolic process	0.00E+00
8	GO:0071284: cellular response to lead ion	0.00E+00
9	GO:0046292: formaldehyde metabolic process	0.00E+00
10	GO:0016093: polyprenol metabolic process	0.00E+00
11	GO:0009826: unidimensional cell growth	1.74E-04
12	GO:0006144: purine nucleobase metabolic process	1.95E-04
13	GO:0001560: regulation of cell growth by extracellular stimulus	1.95E-04
14	GO:0019628: urate catabolic process	1.95E-04
15	GO:0009240: isopentenyl diphosphate biosynthetic process	1.95E-04
16	GO:0031468: nuclear envelope reassembly	1.95E-04
17	GO:0080026: response to indolebutyric acid	4.38E-04
18	GO:0007163: establishment or maintenance of cell polarity	4.38E-04
19	GO:0006432: phenylalanyl-tRNA aminoacylation	4.38E-04
20	GO:0019441: tryptophan catabolic process to kynurenine	4.38E-04
21	GO:0050992: dimethylallyl diphosphate biosynthetic process	4.38E-04
22	GO:0030010: establishment of cell polarity	4.38E-04
23	GO:0043255: regulation of carbohydrate biosynthetic process	4.38E-04
24	GO:0048527: lateral root development	4.84E-04
25	GO:0009853: photorespiration	5.43E-04
26	GO:0008333: endosome to lysosome transport	7.14E-04
27	GO:0045793: positive regulation of cell size	7.14E-04
28	GO:0006760: folic acid-containing compound metabolic process	7.14E-04
29	GO:0010476: gibberellin mediated signaling pathway	7.14E-04
30	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.14E-04
31	GO:0006487: protein N-linked glycosylation	7.89E-04
32	GO:0061077: chaperone-mediated protein folding	9.50E-04
33	GO:0006516: glycoprotein catabolic process	1.02E-03
34	GO:1901332: negative regulation of lateral root development	1.02E-03
35	GO:0051289: protein homotetramerization	1.02E-03
36	GO:0080024: indolebutyric acid metabolic process	1.02E-03
37	GO:0032877: positive regulation of DNA endoreduplication	1.02E-03
38	GO:0006107: oxaloacetate metabolic process	1.02E-03
39	GO:0016226: iron-sulfur cluster assembly	1.04E-03
40	GO:0006012: galactose metabolic process	1.13E-03
41	GO:0051603: proteolysis involved in cellular protein catabolic process	1.13E-03
42	GO:0032366: intracellular sterol transport	1.35E-03
43	GO:0044205: 'de novo' UMP biosynthetic process	1.35E-03
44	GO:0006646: phosphatidylethanolamine biosynthetic process	1.35E-03
45	GO:0015976: carbon utilization	1.35E-03
46	GO:0051781: positive regulation of cell division	1.35E-03
47	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.35E-03
48	GO:0071249: cellular response to nitrate	1.35E-03
49	GO:0006221: pyrimidine nucleotide biosynthetic process	1.35E-03
50	GO:0030041: actin filament polymerization	1.72E-03
51	GO:0018344: protein geranylgeranylation	1.72E-03
52	GO:0008654: phospholipid biosynthetic process	1.76E-03
53	GO:0006796: phosphate-containing compound metabolic process	2.12E-03
54	GO:0055114: oxidation-reduction process	2.12E-03
55	GO:0009117: nucleotide metabolic process	2.12E-03
56	GO:0006555: methionine metabolic process	2.12E-03
57	GO:0010090: trichome morphogenesis	2.14E-03
58	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.54E-03
59	GO:0048444: floral organ morphogenesis	2.54E-03
60	GO:0019509: L-methionine salvage from methylthioadenosine	2.54E-03
61	GO:0016042: lipid catabolic process	2.64E-03
62	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	3.00E-03
63	GO:0050790: regulation of catalytic activity	3.00E-03
64	GO:0006506: GPI anchor biosynthetic process	3.47E-03
65	GO:0000028: ribosomal small subunit assembly	3.47E-03
66	GO:0045010: actin nucleation	3.47E-03
67	GO:0009880: embryonic pattern specification	3.97E-03
68	GO:0009056: catabolic process	4.49E-03
69	GO:0000902: cell morphogenesis	4.49E-03
70	GO:0009821: alkaloid biosynthetic process	4.49E-03
71	GO:0042761: very long-chain fatty acid biosynthetic process	5.04E-03
72	GO:0000103: sulfate assimilation	5.61E-03
73	GO:0043069: negative regulation of programmed cell death	5.61E-03
74	GO:0006896: Golgi to vacuole transport	5.61E-03
75	GO:0072593: reactive oxygen species metabolic process	6.20E-03
76	GO:0010015: root morphogenesis	6.20E-03
77	GO:0052544: defense response by callose deposition in cell wall	6.20E-03
78	GO:0010152: pollen maturation	6.81E-03
79	GO:0035556: intracellular signal transduction	7.16E-03
80	GO:0006807: nitrogen compound metabolic process	7.44E-03
81	GO:0009691: cytokinin biosynthetic process	7.44E-03
82	GO:0006108: malate metabolic process	7.44E-03
83	GO:0006006: glucose metabolic process	7.44E-03
84	GO:0050826: response to freezing	7.44E-03
85	GO:0006829: zinc II ion transport	7.44E-03
86	GO:0007034: vacuolar transport	8.10E-03
87	GO:0048440: carpel development	8.10E-03
88	GO:0002237: response to molecule of bacterial origin	8.10E-03
89	GO:0019853: L-ascorbic acid biosynthetic process	8.77E-03
90	GO:0007030: Golgi organization	8.77E-03
91	GO:0034976: response to endoplasmic reticulum stress	9.46E-03
92	GO:0006071: glycerol metabolic process	9.46E-03
93	GO:0045454: cell redox homeostasis	9.68E-03
94	GO:2000377: regulation of reactive oxygen species metabolic process	1.02E-02
95	GO:0019953: sexual reproduction	1.09E-02
96	GO:0008299: isoprenoid biosynthetic process	1.09E-02
97	GO:0010431: seed maturation	1.17E-02
98	GO:0019915: lipid storage	1.17E-02
99	GO:0046686: response to cadmium ion	1.18E-02
100	GO:0006629: lipid metabolic process	1.26E-02
101	GO:0048443: stamen development	1.40E-02
102	GO:0008152: metabolic process	1.43E-02
103	GO:0009058: biosynthetic process	1.46E-02
104	GO:0042147: retrograde transport, endosome to Golgi	1.48E-02
105	GO:0042391: regulation of membrane potential	1.57E-02
106	GO:0080022: primary root development	1.57E-02
107	GO:0034220: ion transmembrane transport	1.57E-02
108	GO:0000413: protein peptidyl-prolyl isomerization	1.57E-02
109	GO:0015991: ATP hydrolysis coupled proton transport	1.57E-02
110	GO:0006520: cellular amino acid metabolic process	1.65E-02
111	GO:0006662: glycerol ether metabolic process	1.65E-02
112	GO:0061025: membrane fusion	1.74E-02
113	GO:0006623: protein targeting to vacuole	1.83E-02
114	GO:0010150: leaf senescence	1.92E-02
115	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.92E-02
116	GO:1901657: glycosyl compound metabolic process	2.11E-02
117	GO:0009828: plant-type cell wall loosening	2.20E-02
118	GO:0010286: heat acclimation	2.30E-02
119	GO:0000910: cytokinesis	2.40E-02
120	GO:0009615: response to virus	2.50E-02
121	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.60E-02
122	GO:0006974: cellular response to DNA damage stimulus	2.70E-02
123	GO:0006888: ER to Golgi vesicle-mediated transport	2.80E-02
124	GO:0015995: chlorophyll biosynthetic process	2.80E-02
125	GO:0008219: cell death	3.02E-02
126	GO:0010311: lateral root formation	3.12E-02
127	GO:0048767: root hair elongation	3.12E-02
128	GO:0009813: flavonoid biosynthetic process	3.12E-02
129	GO:0006970: response to osmotic stress	3.20E-02
130	GO:0009407: toxin catabolic process	3.23E-02
131	GO:0006499: N-terminal protein myristoylation	3.23E-02
132	GO:0010043: response to zinc ion	3.34E-02
133	GO:0006810: transport	3.36E-02
134	GO:0005975: carbohydrate metabolic process	3.53E-02
135	GO:0034599: cellular response to oxidative stress	3.68E-02
136	GO:0030001: metal ion transport	3.92E-02
137	GO:0006631: fatty acid metabolic process	4.03E-02
138	GO:0009926: auxin polar transport	4.27E-02
139	GO:0009651: response to salt stress	4.30E-02
140	GO:0006886: intracellular protein transport	4.53E-02
141	GO:0009636: response to toxic substance	4.64E-02
142	GO:0009965: leaf morphogenesis	4.64E-02

Rank	GO Term	Adjusted P value
1	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
2	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
3	GO:0004151: dihydroorotase activity	0.00E+00
4	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
5	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
6	GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity	0.00E+00
7	GO:0047886: farnesol dehydrogenase activity	0.00E+00
8	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
9	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
10	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
11	GO:0052670: geraniol kinase activity	0.00E+00
12	GO:0052668: farnesol kinase activity	0.00E+00
13	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
14	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
15	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
16	GO:0050152: omega-amidase activity	0.00E+00
17	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
18	GO:0052671: geranylgeraniol kinase activity	0.00E+00
19	GO:0008137: NADH dehydrogenase (ubiquinone) activity	7.83E-06
20	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.53E-05
21	GO:0010011: auxin binding	2.82E-05
22	GO:0004034: aldose 1-epimerase activity	1.59E-04
23	GO:0004452: isopentenyl-diphosphate delta-isomerase activity	1.95E-04
24	GO:0010209: vacuolar sorting signal binding	1.95E-04
25	GO:0004307: ethanolaminephosphotransferase activity	1.95E-04
26	GO:0016788: hydrolase activity, acting on ester bonds	1.95E-04
27	GO:0019707: protein-cysteine S-acyltransferase activity	1.95E-04
28	GO:0080048: GDP-D-glucose phosphorylase activity	1.95E-04
29	GO:0046480: galactolipid galactosyltransferase activity	1.95E-04
30	GO:0080079: cellobiose glucosidase activity	1.95E-04
31	GO:0004560: alpha-L-fucosidase activity	1.95E-04
32	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.95E-04
33	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	1.95E-04
34	GO:0080047: GDP-L-galactose phosphorylase activity	1.95E-04
35	GO:0004142: diacylglycerol cholinephosphotransferase activity	4.38E-04
36	GO:0004061: arylformamidase activity	4.38E-04
37	GO:0019172: glyoxalase III activity	4.38E-04
38	GO:0010331: gibberellin binding	4.38E-04
39	GO:0030572: phosphatidyltransferase activity	4.38E-04
40	GO:0004826: phenylalanine-tRNA ligase activity	4.38E-04
41	GO:0004089: carbonate dehydratase activity	5.09E-04
42	GO:0004557: alpha-galactosidase activity	7.14E-04
43	GO:0004663: Rab geranylgeranyltransferase activity	7.14E-04
44	GO:0032403: protein complex binding	7.14E-04
45	GO:0052692: raffinose alpha-galactosidase activity	7.14E-04
46	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	7.14E-04
47	GO:0005528: FK506 binding	7.89E-04
48	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.06E-04
49	GO:0004298: threonine-type endopeptidase activity	9.50E-04
50	GO:0035529: NADH pyrophosphatase activity	1.02E-03
51	GO:0004576: oligosaccharyl transferase activity	1.35E-03
52	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.35E-03
53	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.35E-03
54	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.72E-03
55	GO:0005496: steroid binding	1.72E-03
56	GO:0052689: carboxylic ester hydrolase activity	1.77E-03
57	GO:0051117: ATPase binding	2.12E-03
58	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.12E-03
59	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.12E-03
60	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.12E-03
61	GO:0004605: phosphatidate cytidylyltransferase activity	2.12E-03
62	GO:0016787: hydrolase activity	2.14E-03
63	GO:0005261: cation channel activity	2.54E-03
64	GO:0070300: phosphatidic acid binding	2.54E-03
65	GO:0016491: oxidoreductase activity	2.60E-03
66	GO:0008143: poly(A) binding	3.00E-03
67	GO:0008320: protein transmembrane transporter activity	3.00E-03
68	GO:0005085: guanyl-nucleotide exchange factor activity	3.00E-03
69	GO:0004427: inorganic diphosphatase activity	3.00E-03
70	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.47E-03
71	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.49E-03
72	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.49E-03
73	GO:0008889: glycerophosphodiester phosphodiesterase activity	4.49E-03
74	GO:0045309: protein phosphorylated amino acid binding	5.04E-03
75	GO:0016844: strictosidine synthase activity	5.04E-03
76	GO:0051539: 4 iron, 4 sulfur cluster binding	5.09E-03
77	GO:0019904: protein domain specific binding	6.20E-03
78	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.20E-03
79	GO:0008559: xenobiotic-transporting ATPase activity	6.20E-03
80	GO:0004129: cytochrome-c oxidase activity	6.20E-03
81	GO:0000049: tRNA binding	6.81E-03
82	GO:0008378: galactosyltransferase activity	6.81E-03
83	GO:0004022: alcohol dehydrogenase (NAD) activity	7.44E-03
84	GO:0016298: lipase activity	8.03E-03
85	GO:0008234: cysteine-type peptidase activity	8.59E-03
86	GO:0030552: cAMP binding	8.77E-03
87	GO:0030553: cGMP binding	8.77E-03
88	GO:0051536: iron-sulfur cluster binding	1.02E-02
89	GO:0043130: ubiquitin binding	1.02E-02
90	GO:0022857: transmembrane transporter activity	1.04E-02
91	GO:0008324: cation transmembrane transporter activity	1.09E-02
92	GO:0005216: ion channel activity	1.09E-02
93	GO:0015035: protein disulfide oxidoreductase activity	1.14E-02
94	GO:0016746: transferase activity, transferring acyl groups	1.14E-02
95	GO:0009055: electron carrier activity	1.38E-02
96	GO:0003756: protein disulfide isomerase activity	1.40E-02
97	GO:0047134: protein-disulfide reductase activity	1.48E-02
98	GO:0005249: voltage-gated potassium channel activity	1.57E-02
99	GO:0030551: cyclic nucleotide binding	1.57E-02
100	GO:0046873: metal ion transmembrane transporter activity	1.65E-02
101	GO:0050662: coenzyme binding	1.74E-02
102	GO:0004791: thioredoxin-disulfide reductase activity	1.74E-02
103	GO:0016853: isomerase activity	1.74E-02
104	GO:0004872: receptor activity	1.83E-02
105	GO:0004197: cysteine-type endopeptidase activity	2.01E-02
106	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.11E-02
107	GO:0016597: amino acid binding	2.40E-02
108	GO:0015250: water channel activity	2.50E-02
109	GO:0008375: acetylglucosaminyltransferase activity	2.70E-02
110	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.70E-02
111	GO:0004683: calmodulin-dependent protein kinase activity	2.80E-02
112	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.23E-02
113	GO:0050897: cobalt ion binding	3.34E-02
114	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.57E-02
115	GO:0008233: peptidase activity	3.62E-02
116	GO:0008422: beta-glucosidase activity	3.80E-02
117	GO:0005507: copper ion binding	4.04E-02
118	GO:0004364: glutathione transferase activity	4.15E-02
119	GO:0051537: 2 iron, 2 sulfur cluster binding	4.52E-02
120	GO:0043621: protein self-association	4.52E-02
121	GO:0005198: structural molecule activity	4.64E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0097361: CIA complex	0.00E+00
3	GO:0005747: mitochondrial respiratory chain complex I	2.90E-08
4	GO:0005829: cytosol	9.42E-08
5	GO:0005783: endoplasmic reticulum	4.85E-07
6	GO:0005773: vacuole	3.10E-06
7	GO:0045271: respiratory chain complex I	5.05E-05
8	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	1.95E-04
9	GO:0005789: endoplasmic reticulum membrane	2.83E-04
10	GO:0005839: proteasome core complex	9.50E-04
11	GO:0031966: mitochondrial membrane	9.91E-04
12	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.02E-03
13	GO:0008250: oligosaccharyltransferase complex	1.72E-03
14	GO:0031209: SCAR complex	2.12E-03
15	GO:0005771: multivesicular body	2.12E-03
16	GO:0032588: trans-Golgi network membrane	2.12E-03
17	GO:0030904: retromer complex	2.12E-03
18	GO:0005788: endoplasmic reticulum lumen	2.87E-03
19	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.00E-03
20	GO:0031359: integral component of chloroplast outer membrane	3.00E-03
21	GO:0009501: amyloplast	3.47E-03
22	GO:0016020: membrane	3.69E-03
23	GO:0009507: chloroplast	4.03E-03
24	GO:0005794: Golgi apparatus	4.04E-03
25	GO:0000325: plant-type vacuole	4.08E-03
26	GO:0005763: mitochondrial small ribosomal subunit	4.49E-03
27	GO:0030665: clathrin-coated vesicle membrane	5.04E-03
28	GO:0031902: late endosome membrane	5.31E-03
29	GO:0017119: Golgi transport complex	5.61E-03
30	GO:0005774: vacuolar membrane	6.07E-03
31	GO:0005765: lysosomal membrane	6.20E-03
32	GO:0000502: proteasome complex	7.75E-03
33	GO:0005764: lysosome	8.10E-03
34	GO:0005758: mitochondrial intermembrane space	1.02E-02
35	GO:0070469: respiratory chain	1.09E-02
36	GO:0005770: late endosome	1.65E-02
37	GO:0005887: integral component of plasma membrane	1.86E-02
38	GO:0071944: cell periphery	2.11E-02
39	GO:0032580: Golgi cisterna membrane	2.20E-02
40	GO:0010319: stromule	2.30E-02
41	GO:0009536: plastid	2.59E-02
42	GO:0009707: chloroplast outer membrane	3.02E-02
43	GO:0005777: peroxisome	3.09E-02
44	GO:0031969: chloroplast membrane	3.68E-02
45	GO:0005737: cytoplasm	3.79E-02
46	GO:0016021: integral component of membrane	3.92E-02
47	GO:0005856: cytoskeleton	4.64E-02