GO Enrichment Analysis of Co-expressed Genes with
AT3G01480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 3 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 5 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 6 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 7 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 8 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 9 | GO:0009735: response to cytokinin | 5.70E-08 |
| 10 | GO:0032544: plastid translation | 4.63E-07 |
| 11 | GO:0009409: response to cold | 3.79E-06 |
| 12 | GO:0019464: glycine decarboxylation via glycine cleavage system | 6.24E-06 |
| 13 | GO:0006412: translation | 9.68E-06 |
| 14 | GO:0015979: photosynthesis | 2.88E-05 |
| 15 | GO:0010206: photosystem II repair | 6.45E-05 |
| 16 | GO:0009817: defense response to fungus, incompatible interaction | 7.45E-05 |
| 17 | GO:0005982: starch metabolic process | 7.87E-05 |
| 18 | GO:0043489: RNA stabilization | 8.09E-05 |
| 19 | GO:0044262: cellular carbohydrate metabolic process | 8.09E-05 |
| 20 | GO:0010028: xanthophyll cycle | 8.09E-05 |
| 21 | GO:0000023: maltose metabolic process | 8.09E-05 |
| 22 | GO:0000025: maltose catabolic process | 8.09E-05 |
| 23 | GO:0005980: glycogen catabolic process | 8.09E-05 |
| 24 | GO:0042742: defense response to bacterium | 1.15E-04 |
| 25 | GO:0005976: polysaccharide metabolic process | 1.93E-04 |
| 26 | GO:0016122: xanthophyll metabolic process | 1.93E-04 |
| 27 | GO:0006518: peptide metabolic process | 3.24E-04 |
| 28 | GO:0080055: low-affinity nitrate transport | 3.24E-04 |
| 29 | GO:0048281: inflorescence morphogenesis | 3.24E-04 |
| 30 | GO:0010148: transpiration | 4.66E-04 |
| 31 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.66E-04 |
| 32 | GO:0010731: protein glutathionylation | 4.66E-04 |
| 33 | GO:0006424: glutamyl-tRNA aminoacylation | 4.66E-04 |
| 34 | GO:0019252: starch biosynthetic process | 5.54E-04 |
| 35 | GO:2000122: negative regulation of stomatal complex development | 6.21E-04 |
| 36 | GO:0006546: glycine catabolic process | 6.21E-04 |
| 37 | GO:0010021: amylopectin biosynthetic process | 6.21E-04 |
| 38 | GO:0010037: response to carbon dioxide | 6.21E-04 |
| 39 | GO:0015976: carbon utilization | 6.21E-04 |
| 40 | GO:0006109: regulation of carbohydrate metabolic process | 6.21E-04 |
| 41 | GO:0015994: chlorophyll metabolic process | 6.21E-04 |
| 42 | GO:0006544: glycine metabolic process | 7.86E-04 |
| 43 | GO:0032543: mitochondrial translation | 7.86E-04 |
| 44 | GO:0006461: protein complex assembly | 7.86E-04 |
| 45 | GO:0009913: epidermal cell differentiation | 9.59E-04 |
| 46 | GO:0006563: L-serine metabolic process | 9.59E-04 |
| 47 | GO:0000470: maturation of LSU-rRNA | 9.59E-04 |
| 48 | GO:1901259: chloroplast rRNA processing | 1.14E-03 |
| 49 | GO:0009955: adaxial/abaxial pattern specification | 1.14E-03 |
| 50 | GO:0009658: chloroplast organization | 1.26E-03 |
| 51 | GO:0042254: ribosome biogenesis | 1.29E-03 |
| 52 | GO:0070370: cellular heat acclimation | 1.34E-03 |
| 53 | GO:0010103: stomatal complex morphogenesis | 1.34E-03 |
| 54 | GO:0010196: nonphotochemical quenching | 1.34E-03 |
| 55 | GO:0034599: cellular response to oxidative stress | 1.42E-03 |
| 56 | GO:0005978: glycogen biosynthetic process | 1.54E-03 |
| 57 | GO:0009657: plastid organization | 1.76E-03 |
| 58 | GO:0001558: regulation of cell growth | 1.76E-03 |
| 59 | GO:0006783: heme biosynthetic process | 1.98E-03 |
| 60 | GO:0045454: cell redox homeostasis | 2.08E-03 |
| 61 | GO:0035999: tetrahydrofolate interconversion | 2.22E-03 |
| 62 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.46E-03 |
| 63 | GO:0043085: positive regulation of catalytic activity | 2.71E-03 |
| 64 | GO:0009773: photosynthetic electron transport in photosystem I | 2.71E-03 |
| 65 | GO:0005983: starch catabolic process | 2.97E-03 |
| 66 | GO:0010102: lateral root morphogenesis | 3.24E-03 |
| 67 | GO:0009767: photosynthetic electron transport chain | 3.24E-03 |
| 68 | GO:0009266: response to temperature stimulus | 3.52E-03 |
| 69 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.40E-03 |
| 70 | GO:0000027: ribosomal large subunit assembly | 4.40E-03 |
| 71 | GO:0007017: microtubule-based process | 4.70E-03 |
| 72 | GO:0051302: regulation of cell division | 4.70E-03 |
| 73 | GO:0006418: tRNA aminoacylation for protein translation | 4.70E-03 |
| 74 | GO:0061077: chaperone-mediated protein folding | 5.02E-03 |
| 75 | GO:0035428: hexose transmembrane transport | 5.34E-03 |
| 76 | GO:0009686: gibberellin biosynthetic process | 5.67E-03 |
| 77 | GO:0001944: vasculature development | 5.67E-03 |
| 78 | GO:0007623: circadian rhythm | 5.69E-03 |
| 79 | GO:0046686: response to cadmium ion | 5.92E-03 |
| 80 | GO:0006662: glycerol ether metabolic process | 7.06E-03 |
| 81 | GO:0046323: glucose import | 7.06E-03 |
| 82 | GO:0048825: cotyledon development | 7.79E-03 |
| 83 | GO:0000302: response to reactive oxygen species | 8.17E-03 |
| 84 | GO:0030163: protein catabolic process | 8.94E-03 |
| 85 | GO:0015995: chlorophyll biosynthetic process | 1.19E-02 |
| 86 | GO:0048481: plant ovule development | 1.27E-02 |
| 87 | GO:0009631: cold acclimation | 1.41E-02 |
| 88 | GO:0010119: regulation of stomatal movement | 1.41E-02 |
| 89 | GO:0045087: innate immune response | 1.51E-02 |
| 90 | GO:0009853: photorespiration | 1.51E-02 |
| 91 | GO:0006631: fatty acid metabolic process | 1.70E-02 |
| 92 | GO:0008152: metabolic process | 1.78E-02 |
| 93 | GO:0009965: leaf morphogenesis | 1.96E-02 |
| 94 | GO:0009664: plant-type cell wall organization | 2.12E-02 |
| 95 | GO:0005975: carbohydrate metabolic process | 2.32E-02 |
| 96 | GO:0006857: oligopeptide transport | 2.34E-02 |
| 97 | GO:0043086: negative regulation of catalytic activity | 2.51E-02 |
| 98 | GO:0009626: plant-type hypersensitive response | 2.63E-02 |
| 99 | GO:0009740: gibberellic acid mediated signaling pathway | 2.75E-02 |
| 100 | GO:0009624: response to nematode | 2.87E-02 |
| 101 | GO:0006396: RNA processing | 2.93E-02 |
| 102 | GO:0009845: seed germination | 3.56E-02 |
| 103 | GO:0042744: hydrogen peroxide catabolic process | 3.69E-02 |
| 104 | GO:0009790: embryo development | 3.76E-02 |
| 105 | GO:0009793: embryo development ending in seed dormancy | 3.91E-02 |
| 106 | GO:0009451: RNA modification | 4.30E-02 |
| 107 | GO:0055114: oxidation-reduction process | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0019843: rRNA binding | 5.65E-08 |
| 7 | GO:0003735: structural constituent of ribosome | 1.57E-06 |
| 8 | GO:0008266: poly(U) RNA binding | 3.29E-06 |
| 9 | GO:0005528: FK506 binding | 5.94E-06 |
| 10 | GO:0051920: peroxiredoxin activity | 2.28E-05 |
| 11 | GO:0016209: antioxidant activity | 4.08E-05 |
| 12 | GO:0004853: uroporphyrinogen decarboxylase activity | 8.09E-05 |
| 13 | GO:0004856: xylulokinase activity | 8.09E-05 |
| 14 | GO:0009496: plastoquinol--plastocyanin reductase activity | 8.09E-05 |
| 15 | GO:0004134: 4-alpha-glucanotransferase activity | 8.09E-05 |
| 16 | GO:0004645: phosphorylase activity | 8.09E-05 |
| 17 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 8.09E-05 |
| 18 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 8.09E-05 |
| 19 | GO:0008184: glycogen phosphorylase activity | 8.09E-05 |
| 20 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 8.09E-05 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.90E-04 |
| 22 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.93E-04 |
| 23 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.93E-04 |
| 24 | GO:0010297: heteropolysaccharide binding | 1.93E-04 |
| 25 | GO:0033201: alpha-1,4-glucan synthase activity | 1.93E-04 |
| 26 | GO:0004750: ribulose-phosphate 3-epimerase activity | 1.93E-04 |
| 27 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 3.24E-04 |
| 28 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 3.24E-04 |
| 29 | GO:0030267: glyoxylate reductase (NADP) activity | 3.24E-04 |
| 30 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 3.24E-04 |
| 31 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.24E-04 |
| 32 | GO:0043169: cation binding | 3.24E-04 |
| 33 | GO:0004373: glycogen (starch) synthase activity | 3.24E-04 |
| 34 | GO:0002161: aminoacyl-tRNA editing activity | 3.24E-04 |
| 35 | GO:0043023: ribosomal large subunit binding | 4.66E-04 |
| 36 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.66E-04 |
| 37 | GO:0019199: transmembrane receptor protein kinase activity | 6.21E-04 |
| 38 | GO:0009011: starch synthase activity | 6.21E-04 |
| 39 | GO:0042277: peptide binding | 6.21E-04 |
| 40 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.86E-04 |
| 41 | GO:0004372: glycine hydroxymethyltransferase activity | 7.86E-04 |
| 42 | GO:0003959: NADPH dehydrogenase activity | 7.86E-04 |
| 43 | GO:2001070: starch binding | 9.59E-04 |
| 44 | GO:0004130: cytochrome-c peroxidase activity | 9.59E-04 |
| 45 | GO:0008236: serine-type peptidase activity | 1.04E-03 |
| 46 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.14E-03 |
| 47 | GO:0004222: metalloendopeptidase activity | 1.19E-03 |
| 48 | GO:0004601: peroxidase activity | 1.26E-03 |
| 49 | GO:0008047: enzyme activator activity | 2.46E-03 |
| 50 | GO:0044183: protein binding involved in protein folding | 2.71E-03 |
| 51 | GO:0015386: potassium:proton antiporter activity | 2.71E-03 |
| 52 | GO:0000049: tRNA binding | 2.97E-03 |
| 53 | GO:0004089: carbonate dehydratase activity | 3.24E-03 |
| 54 | GO:0004857: enzyme inhibitor activity | 4.40E-03 |
| 55 | GO:0030170: pyridoxal phosphate binding | 4.58E-03 |
| 56 | GO:0004252: serine-type endopeptidase activity | 4.58E-03 |
| 57 | GO:0015079: potassium ion transmembrane transporter activity | 4.70E-03 |
| 58 | GO:0047134: protein-disulfide reductase activity | 6.35E-03 |
| 59 | GO:0004812: aminoacyl-tRNA ligase activity | 6.35E-03 |
| 60 | GO:0005355: glucose transmembrane transporter activity | 7.42E-03 |
| 61 | GO:0004791: thioredoxin-disulfide reductase activity | 7.42E-03 |
| 62 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.94E-03 |
| 63 | GO:0008237: metallopeptidase activity | 9.75E-03 |
| 64 | GO:0005200: structural constituent of cytoskeleton | 9.75E-03 |
| 65 | GO:0004364: glutathione transferase activity | 1.75E-02 |
| 66 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.91E-02 |
| 67 | GO:0016491: oxidoreductase activity | 1.94E-02 |
| 68 | GO:0003729: mRNA binding | 2.26E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 2.93E-02 |
| 70 | GO:0015144: carbohydrate transmembrane transporter activity | 3.82E-02 |
| 71 | GO:0005351: sugar:proton symporter activity | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 5.38E-47 |
| 4 | GO:0009570: chloroplast stroma | 3.50E-35 |
| 5 | GO:0009534: chloroplast thylakoid | 2.37E-27 |
| 6 | GO:0009579: thylakoid | 1.18E-25 |
| 7 | GO:0009941: chloroplast envelope | 3.43E-25 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 4.86E-20 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.27E-16 |
| 10 | GO:0031977: thylakoid lumen | 4.92E-13 |
| 11 | GO:0010319: stromule | 1.51E-08 |
| 12 | GO:0030095: chloroplast photosystem II | 2.99E-08 |
| 13 | GO:0005840: ribosome | 1.07E-07 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 2.01E-07 |
| 15 | GO:0009501: amyloplast | 4.08E-05 |
| 16 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 8.09E-05 |
| 17 | GO:0016020: membrane | 1.29E-04 |
| 18 | GO:0009508: plastid chromosome | 1.49E-04 |
| 19 | GO:0030093: chloroplast photosystem I | 1.93E-04 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 2.67E-04 |
| 21 | GO:0005960: glycine cleavage complex | 4.66E-04 |
| 22 | GO:0019898: extrinsic component of membrane | 5.54E-04 |
| 23 | GO:0009295: nucleoid | 7.56E-04 |
| 24 | GO:0009512: cytochrome b6f complex | 7.86E-04 |
| 25 | GO:0009536: plastid | 9.20E-04 |
| 26 | GO:0031969: chloroplast membrane | 1.65E-03 |
| 27 | GO:0048046: apoplast | 1.70E-03 |
| 28 | GO:0022625: cytosolic large ribosomal subunit | 1.76E-03 |
| 29 | GO:0042644: chloroplast nucleoid | 1.98E-03 |
| 30 | GO:0045298: tubulin complex | 1.98E-03 |
| 31 | GO:0005763: mitochondrial small ribosomal subunit | 1.98E-03 |
| 32 | GO:0009706: chloroplast inner membrane | 3.31E-03 |
| 33 | GO:0010287: plastoglobule | 3.91E-03 |
| 34 | GO:0022626: cytosolic ribosome | 5.28E-03 |
| 35 | GO:0009523: photosystem II | 7.79E-03 |
| 36 | GO:0030529: intracellular ribonucleoprotein complex | 1.06E-02 |
| 37 | GO:0015934: large ribosomal subunit | 1.41E-02 |
| 38 | GO:0005834: heterotrimeric G-protein complex | 2.63E-02 |
| 39 | GO:0005759: mitochondrial matrix | 3.96E-02 |