co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G01100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042908: xenobiotic transport	0.00E+00
2	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
3	GO:0006593: ornithine catabolic process	0.00E+00
4	GO:0043171: peptide catabolic process	0.00E+00
5	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
6	GO:0010265: SCF complex assembly	6.10E-05
7	GO:0019544: arginine catabolic process to glutamate	6.10E-05
8	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	6.10E-05
9	GO:0006007: glucose catabolic process	6.10E-05
10	GO:0031468: nuclear envelope reassembly	6.10E-05
11	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	6.10E-05
12	GO:0061014: positive regulation of mRNA catabolic process	6.10E-05
13	GO:1903409: reactive oxygen species biosynthetic process	6.10E-05
14	GO:0006212: uracil catabolic process	1.48E-04
15	GO:0043255: regulation of carbohydrate biosynthetic process	1.48E-04
16	GO:0019483: beta-alanine biosynthetic process	1.48E-04
17	GO:0030835: negative regulation of actin filament depolymerization	2.51E-04
18	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	2.51E-04
19	GO:0046034: ATP metabolic process	2.51E-04
20	GO:0051646: mitochondrion localization	2.51E-04
21	GO:0015991: ATP hydrolysis coupled proton transport	3.11E-04
22	GO:0006516: glycoprotein catabolic process	3.65E-04
23	GO:0015700: arsenite transport	3.65E-04
24	GO:0010587: miRNA catabolic process	3.65E-04
25	GO:0010255: glucose mediated signaling pathway	3.65E-04
26	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	4.88E-04
27	GO:0032366: intracellular sterol transport	4.88E-04
28	GO:0098719: sodium ion import across plasma membrane	6.19E-04
29	GO:0009229: thiamine diphosphate biosynthetic process	6.19E-04
30	GO:0018344: protein geranylgeranylation	6.19E-04
31	GO:0009816: defense response to bacterium, incompatible interaction	6.25E-04
32	GO:0046686: response to cadmium ion	7.23E-04
33	GO:0006561: proline biosynthetic process	7.57E-04
34	GO:0006555: methionine metabolic process	7.57E-04
35	GO:0009228: thiamine biosynthetic process	7.57E-04
36	GO:0019509: L-methionine salvage from methylthioadenosine	9.01E-04
37	GO:0006099: tricarboxylic acid cycle	9.99E-04
38	GO:0050790: regulation of catalytic activity	1.05E-03
39	GO:0010044: response to aluminum ion	1.05E-03
40	GO:0051693: actin filament capping	1.05E-03
41	GO:0070370: cellular heat acclimation	1.05E-03
42	GO:0040029: regulation of gene expression, epigenetic	1.21E-03
43	GO:0006402: mRNA catabolic process	1.21E-03
44	GO:0043562: cellular response to nitrogen levels	1.38E-03
45	GO:0015996: chlorophyll catabolic process	1.38E-03
46	GO:0046685: response to arsenic-containing substance	1.55E-03
47	GO:0009821: alkaloid biosynthetic process	1.55E-03
48	GO:0080144: amino acid homeostasis	1.55E-03
49	GO:0051603: proteolysis involved in cellular protein catabolic process	1.68E-03
50	GO:0051453: regulation of intracellular pH	1.73E-03
51	GO:0006096: glycolytic process	1.91E-03
52	GO:0006896: Golgi to vacuole transport	1.92E-03
53	GO:0009626: plant-type hypersensitive response	2.04E-03
54	GO:0018119: peptidyl-cysteine S-nitrosylation	2.12E-03
55	GO:0002213: defense response to insect	2.32E-03
56	GO:0006508: proteolysis	2.36E-03
57	GO:0018105: peptidyl-serine phosphorylation	2.36E-03
58	GO:0006108: malate metabolic process	2.52E-03
59	GO:0006094: gluconeogenesis	2.52E-03
60	GO:0006807: nitrogen compound metabolic process	2.52E-03
61	GO:0009691: cytokinin biosynthetic process	2.52E-03
62	GO:0007034: vacuolar transport	2.74E-03
63	GO:0007030: Golgi organization	2.96E-03
64	GO:0005975: carbohydrate metabolic process	3.21E-03
65	GO:0042744: hydrogen peroxide catabolic process	3.25E-03
66	GO:0051017: actin filament bundle assembly	3.42E-03
67	GO:0006338: chromatin remodeling	3.42E-03
68	GO:0003333: amino acid transmembrane transport	3.89E-03
69	GO:0019748: secondary metabolic process	4.15E-03
70	GO:0001944: vasculature development	4.40E-03
71	GO:0010051: xylem and phloem pattern formation	5.19E-03
72	GO:0010118: stomatal movement	5.19E-03
73	GO:0042391: regulation of membrane potential	5.19E-03
74	GO:0010154: fruit development	5.46E-03
75	GO:0061025: membrane fusion	5.74E-03
76	GO:0006814: sodium ion transport	5.74E-03
77	GO:0009826: unidimensional cell growth	5.84E-03
78	GO:0006623: protein targeting to vacuole	6.03E-03
79	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	6.32E-03
80	GO:0009630: gravitropism	6.61E-03
81	GO:0009723: response to ethylene	7.01E-03
82	GO:0010286: heat acclimation	7.52E-03
83	GO:0071805: potassium ion transmembrane transport	7.52E-03
84	GO:0055114: oxidation-reduction process	7.62E-03
85	GO:0046777: protein autophosphorylation	8.04E-03
86	GO:0009615: response to virus	8.16E-03
87	GO:0044550: secondary metabolite biosynthetic process	8.18E-03
88	GO:0008219: cell death	9.82E-03
89	GO:0009817: defense response to fungus, incompatible interaction	9.82E-03
90	GO:0007568: aging	1.09E-02
91	GO:0006631: fatty acid metabolic process	1.31E-02
92	GO:0009926: auxin polar transport	1.39E-02
93	GO:0006855: drug transmembrane transport	1.55E-02
94	GO:0042538: hyperosmotic salinity response	1.63E-02
95	GO:0009809: lignin biosynthetic process	1.71E-02
96	GO:0009738: abscisic acid-activated signaling pathway	1.91E-02
97	GO:0009555: pollen development	1.98E-02
98	GO:0009620: response to fungus	2.06E-02
99	GO:0035556: intracellular signal transduction	2.09E-02
100	GO:0016569: covalent chromatin modification	2.11E-02
101	GO:0055085: transmembrane transport	2.51E-02
102	GO:0009058: biosynthetic process	2.68E-02
103	GO:0010150: leaf senescence	3.25E-02
104	GO:0010228: vegetative to reproductive phase transition of meristem	3.36E-02
105	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.52E-02
106	GO:0010468: regulation of gene expression	3.68E-02
107	GO:0071555: cell wall organization	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
4	GO:0003837: beta-ureidopropionase activity	0.00E+00
5	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
6	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
7	GO:0015391: nucleobase:cation symporter activity	0.00E+00
8	GO:0052692: raffinose alpha-galactosidase activity	8.32E-07
9	GO:0004557: alpha-galactosidase activity	8.32E-07
10	GO:0016656: monodehydroascorbate reductase (NADH) activity	2.00E-06
11	GO:0071992: phytochelatin transmembrane transporter activity	6.10E-05
12	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	6.10E-05
13	GO:0004347: glucose-6-phosphate isomerase activity	6.10E-05
14	GO:0010013: N-1-naphthylphthalamic acid binding	6.10E-05
15	GO:0004560: alpha-L-fucosidase activity	6.10E-05
16	GO:0001530: lipopolysaccharide binding	6.10E-05
17	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	6.10E-05
18	GO:0010209: vacuolar sorting signal binding	6.10E-05
19	GO:0070006: metalloaminopeptidase activity	6.10E-05
20	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	1.48E-04
21	GO:0004534: 5'-3' exoribonuclease activity	1.48E-04
22	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	2.51E-04
23	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.51E-04
24	GO:0004663: Rab geranylgeranyltransferase activity	2.51E-04
25	GO:0004197: cysteine-type endopeptidase activity	4.41E-04
26	GO:0042277: peptide binding	4.88E-04
27	GO:0004301: epoxide hydrolase activity	4.88E-04
28	GO:0008409: 5'-3' exonuclease activity	4.88E-04
29	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	4.88E-04
30	GO:0009931: calcium-dependent protein serine/threonine kinase activity	6.59E-04
31	GO:0004683: calmodulin-dependent protein kinase activity	6.93E-04
32	GO:0016615: malate dehydrogenase activity	7.57E-04
33	GO:0051117: ATPase binding	7.57E-04
34	GO:0030060: L-malate dehydrogenase activity	9.01E-04
35	GO:0005261: cation channel activity	9.01E-04
36	GO:0050660: flavin adenine dinucleotide binding	9.56E-04
37	GO:0005516: calmodulin binding	1.09E-03
38	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.21E-03
39	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.55E-03
40	GO:0016844: strictosidine synthase activity	1.73E-03
41	GO:0008234: cysteine-type peptidase activity	1.79E-03
42	GO:0004177: aminopeptidase activity	2.12E-03
43	GO:0008559: xenobiotic-transporting ATPase activity	2.12E-03
44	GO:0015386: potassium:proton antiporter activity	2.12E-03
45	GO:0046961: proton-transporting ATPase activity, rotational mechanism	2.12E-03
46	GO:0004022: alcohol dehydrogenase (NAD) activity	2.52E-03
47	GO:0031072: heat shock protein binding	2.52E-03
48	GO:0030552: cAMP binding	2.96E-03
49	GO:0030553: cGMP binding	2.96E-03
50	GO:0051536: iron-sulfur cluster binding	3.42E-03
51	GO:0043130: ubiquitin binding	3.42E-03
52	GO:0005216: ion channel activity	3.65E-03
53	GO:0008324: cation transmembrane transporter activity	3.65E-03
54	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.99E-03
55	GO:0005249: voltage-gated potassium channel activity	5.19E-03
56	GO:0004402: histone acetyltransferase activity	5.19E-03
57	GO:0030551: cyclic nucleotide binding	5.19E-03
58	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	5.46E-03
59	GO:0016788: hydrolase activity, acting on ester bonds	6.18E-03
60	GO:0015385: sodium:proton antiporter activity	6.91E-03
61	GO:0051015: actin filament binding	6.91E-03
62	GO:0005509: calcium ion binding	7.68E-03
63	GO:0051213: dioxygenase activity	8.16E-03
64	GO:0005506: iron ion binding	8.34E-03
65	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	9.73E-03
66	GO:0030145: manganese ion binding	1.09E-02
67	GO:0016491: oxidoreductase activity	1.21E-02
68	GO:0004185: serine-type carboxypeptidase activity	1.39E-02
69	GO:0051537: 2 iron, 2 sulfur cluster binding	1.47E-02
70	GO:0008289: lipid binding	1.55E-02
71	GO:0015171: amino acid transmembrane transporter activity	1.84E-02
72	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.97E-02
73	GO:0022857: transmembrane transporter activity	2.11E-02
74	GO:0051082: unfolded protein binding	2.20E-02
75	GO:0030170: pyridoxal phosphate binding	2.78E-02
76	GO:0005507: copper ion binding	2.82E-02
77	GO:0019825: oxygen binding	2.82E-02
78	GO:0008270: zinc ion binding	3.45E-02
79	GO:0042802: identical protein binding	3.85E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0005773: vacuole	1.10E-10
3	GO:0005774: vacuolar membrane	2.58E-05
4	GO:0005829: cytosol	2.97E-05
5	GO:0010494: cytoplasmic stress granule	4.19E-05
6	GO:0000325: plant-type vacuole	5.31E-05
7	GO:0005764: lysosome	1.14E-04
8	GO:0048046: apoplast	1.81E-04
9	GO:0005782: peroxisomal matrix	2.51E-04
10	GO:0005968: Rab-protein geranylgeranyltransferase complex	3.65E-04
11	GO:0033180: proton-transporting V-type ATPase, V1 domain	3.65E-04
12	GO:0005759: mitochondrial matrix	4.11E-04
13	GO:0005844: polysome	4.88E-04
14	GO:0005615: extracellular space	5.34E-04
15	GO:0000932: P-body	5.92E-04
16	GO:0055035: plastid thylakoid membrane	6.19E-04
17	GO:0045273: respiratory chain complex II	1.21E-03
18	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.21E-03
19	GO:0031090: organelle membrane	1.55E-03
20	GO:0030665: clathrin-coated vesicle membrane	1.73E-03
21	GO:0017119: Golgi transport complex	1.92E-03
22	GO:0005777: peroxisome	4.15E-03
23	GO:0005770: late endosome	5.46E-03
24	GO:0005886: plasma membrane	6.48E-03
25	GO:0032580: Golgi cisterna membrane	7.21E-03
26	GO:0005778: peroxisomal membrane	7.52E-03
27	GO:0031902: late endosome membrane	1.31E-02
28	GO:0005618: cell wall	1.37E-02
29	GO:0005887: integral component of plasma membrane	1.51E-02
30	GO:0010008: endosome membrane	1.97E-02
31	GO:0009706: chloroplast inner membrane	2.20E-02
32	GO:0005623: cell	2.63E-02
33	GO:0016020: membrane	2.69E-02
34	GO:0005576: extracellular region	3.19E-02
35	GO:0005783: endoplasmic reticulum	3.19E-02
36	GO:0009705: plant-type vacuole membrane	3.25E-02