Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G48110

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006592: ornithine biosynthetic process0.00E+00
2GO:0043171: peptide catabolic process0.00E+00
3GO:0010286: heat acclimation3.07E-06
4GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic2.41E-05
5GO:0061014: positive regulation of mRNA catabolic process2.41E-05
6GO:0010265: SCF complex assembly2.41E-05
7GO:0001736: establishment of planar polarity6.16E-05
8GO:0001944: vasculature development6.70E-05
9GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.09E-04
10GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.09E-04
11GO:0046168: glycerol-3-phosphate catabolic process1.09E-04
12GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.09E-04
13GO:0071281: cellular response to iron ion1.40E-04
14GO:0001676: long-chain fatty acid metabolic process1.62E-04
15GO:0051259: protein oligomerization1.62E-04
16GO:0006072: glycerol-3-phosphate metabolic process1.62E-04
17GO:0009743: response to carbohydrate1.62E-04
18GO:0010587: miRNA catabolic process1.62E-04
19GO:0048442: sepal development2.21E-04
20GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA2.21E-04
21GO:0045087: innate immune response3.05E-04
22GO:0006751: glutathione catabolic process3.51E-04
23GO:0042176: regulation of protein catabolic process3.51E-04
24GO:0009926: auxin polar transport3.92E-04
25GO:0010555: response to mannitol4.20E-04
26GO:2000067: regulation of root morphogenesis4.20E-04
27GO:0019509: L-methionine salvage from methylthioadenosine4.20E-04
28GO:0070370: cellular heat acclimation4.92E-04
29GO:0031540: regulation of anthocyanin biosynthetic process5.68E-04
30GO:0040029: regulation of gene expression, epigenetic5.68E-04
31GO:0006402: mRNA catabolic process5.68E-04
32GO:0007389: pattern specification process6.45E-04
33GO:0007186: G-protein coupled receptor signaling pathway6.45E-04
34GO:0006526: arginine biosynthetic process6.45E-04
35GO:0048589: developmental growth7.25E-04
36GO:0051301: cell division8.71E-04
37GO:0048829: root cap development8.92E-04
38GO:0048441: petal development8.92E-04
39GO:0009750: response to fructose9.78E-04
40GO:0048765: root hair cell differentiation9.78E-04
41GO:0052544: defense response by callose deposition in cell wall9.78E-04
42GO:0009725: response to hormone1.16E-03
43GO:0002237: response to molecule of bacterial origin1.25E-03
44GO:0071732: cellular response to nitric oxide1.35E-03
45GO:0031348: negative regulation of defense response1.87E-03
46GO:0071369: cellular response to ethylene stimulus1.98E-03
47GO:0006284: base-excision repair2.10E-03
48GO:0009723: response to ethylene2.17E-03
49GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.21E-03
50GO:0010051: xylem and phloem pattern formation2.33E-03
51GO:0010182: sugar mediated signaling pathway2.45E-03
52GO:0010154: fruit development2.45E-03
53GO:0009749: response to glucose2.70E-03
54GO:0010193: response to ozone2.82E-03
55GO:0009630: gravitropism2.95E-03
56GO:0030163: protein catabolic process3.08E-03
57GO:0006914: autophagy3.22E-03
58GO:0009751: response to salicylic acid3.36E-03
59GO:0009627: systemic acquired resistance3.90E-03
60GO:0008219: cell death4.34E-03
61GO:0009873: ethylene-activated signaling pathway4.39E-03
62GO:0010311: lateral root formation4.49E-03
63GO:0006499: N-terminal protein myristoylation4.64E-03
64GO:0009734: auxin-activated signaling pathway4.78E-03
65GO:0010119: regulation of stomatal movement4.80E-03
66GO:0006631: fatty acid metabolic process5.75E-03
67GO:0009738: abscisic acid-activated signaling pathway5.82E-03
68GO:0009744: response to sucrose6.08E-03
69GO:0051707: response to other organism6.08E-03
70GO:0009736: cytokinin-activated signaling pathway7.47E-03
71GO:0009626: plant-type hypersensitive response8.77E-03
72GO:0018105: peptidyl-serine phosphorylation9.75E-03
73GO:0051726: regulation of cell cycle9.96E-03
74GO:0042742: defense response to bacterium1.22E-02
75GO:0010150: leaf senescence1.40E-02
76GO:0010228: vegetative to reproductive phase transition of meristem1.45E-02
77GO:0009826: unidimensional cell growth1.86E-02
78GO:0006970: response to osmotic stress2.02E-02
79GO:0048366: leaf development2.15E-02
80GO:0080167: response to karrikin2.23E-02
81GO:0016192: vesicle-mediated transport2.31E-02
82GO:0046777: protein autophosphorylation2.34E-02
83GO:0045454: cell redox homeostasis2.54E-02
84GO:0009408: response to heat2.95E-02
85GO:0006397: mRNA processing3.04E-02
86GO:0009753: response to jasmonic acid3.10E-02
87GO:0006508: proteolysis3.75E-02
88GO:0035556: intracellular signal transduction4.61E-02
RankGO TermAdjusted P value
1GO:0008777: acetylornithine deacetylase activity0.00E+00
2GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
3GO:0046522: S-methyl-5-thioribose kinase activity0.00E+00
4GO:0010013: N-1-naphthylphthalamic acid binding2.41E-05
5GO:0030544: Hsp70 protein binding2.41E-05
6GO:0070006: metalloaminopeptidase activity2.41E-05
7GO:0004534: 5'-3' exoribonuclease activity6.16E-05
8GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.09E-04
9GO:0001664: G-protein coupled receptor binding1.09E-04
10GO:0031683: G-protein beta/gamma-subunit complex binding1.09E-04
11GO:0035198: miRNA binding1.62E-04
12GO:0008409: 5'-3' exonuclease activity2.21E-04
13GO:0042277: peptide binding2.21E-04
14GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.20E-04
15GO:0102391: decanoate--CoA ligase activity4.20E-04
16GO:0004467: long-chain fatty acid-CoA ligase activity4.92E-04
17GO:0000166: nucleotide binding7.83E-04
18GO:0030234: enzyme regulator activity8.92E-04
19GO:0004177: aminopeptidase activity9.78E-04
20GO:0004521: endoribonuclease activity1.07E-03
21GO:0043130: ubiquitin binding1.55E-03
22GO:0043531: ADP binding2.06E-03
23GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.08E-03
24GO:0008237: metallopeptidase activity3.35E-03
25GO:0009931: calcium-dependent protein serine/threonine kinase activity3.90E-03
26GO:0004683: calmodulin-dependent protein kinase activity4.05E-03
27GO:0003993: acid phosphatase activity5.26E-03
28GO:0051539: 4 iron, 4 sulfur cluster binding5.59E-03
29GO:0051287: NAD binding6.94E-03
30GO:0005515: protein binding8.30E-03
31GO:0005524: ATP binding1.20E-02
32GO:0042802: identical protein binding1.66E-02
33GO:0003729: mRNA binding1.82E-02
34GO:0046872: metal ion binding2.09E-02
35GO:0004871: signal transducer activity2.62E-02
36GO:0016787: hydrolase activity2.62E-02
37GO:0004722: protein serine/threonine phosphatase activity2.71E-02
38GO:0003924: GTPase activity2.95E-02
RankGO TermAdjusted P value
1GO:0046861: glyoxysomal membrane1.09E-04
2GO:0005829: cytosol1.52E-04
3GO:0009331: glycerol-3-phosphate dehydrogenase complex1.62E-04
4GO:0005844: polysome2.21E-04
5GO:0005776: autophagosome2.21E-04
6GO:0009514: glyoxysome6.45E-04
7GO:0010494: cytoplasmic stress granule7.25E-04
8GO:0031090: organelle membrane7.25E-04
9GO:0008540: proteasome regulatory particle, base subcomplex8.07E-04
10GO:0031410: cytoplasmic vesicle1.87E-03
11GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.06E-03
12GO:0000932: P-body3.63E-03
13GO:0015934: large ribosomal subunit4.80E-03
14GO:0005634: nucleus7.20E-03
15GO:0000502: proteasome complex7.47E-03
16GO:0005834: heterotrimeric G-protein complex8.77E-03
17GO:0009506: plasmodesma1.37E-02
18GO:0005886: plasma membrane2.97E-02
19GO:0005777: peroxisome4.89E-02
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Gene type



Gene DE type