GO Enrichment Analysis of Co-expressed Genes with
AT2G48070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 5 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 6 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 7 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 8 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 9 | GO:0015979: photosynthesis | 2.36E-11 |
| 10 | GO:0010027: thylakoid membrane organization | 7.72E-09 |
| 11 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.45E-06 |
| 12 | GO:0010207: photosystem II assembly | 1.92E-05 |
| 13 | GO:0018298: protein-chromophore linkage | 2.11E-05 |
| 14 | GO:0048564: photosystem I assembly | 1.32E-04 |
| 15 | GO:0043007: maintenance of rDNA | 1.73E-04 |
| 16 | GO:1902458: positive regulation of stomatal opening | 1.73E-04 |
| 17 | GO:0034337: RNA folding | 1.73E-04 |
| 18 | GO:0043953: protein transport by the Tat complex | 1.73E-04 |
| 19 | GO:0000476: maturation of 4.5S rRNA | 1.73E-04 |
| 20 | GO:0000967: rRNA 5'-end processing | 1.73E-04 |
| 21 | GO:0000481: maturation of 5S rRNA | 1.73E-04 |
| 22 | GO:0065002: intracellular protein transmembrane transport | 1.73E-04 |
| 23 | GO:0043686: co-translational protein modification | 1.73E-04 |
| 24 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.73E-04 |
| 25 | GO:0016311: dephosphorylation | 3.01E-04 |
| 26 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.92E-04 |
| 27 | GO:0006568: tryptophan metabolic process | 3.92E-04 |
| 28 | GO:0034470: ncRNA processing | 3.92E-04 |
| 29 | GO:0006435: threonyl-tRNA aminoacylation | 3.92E-04 |
| 30 | GO:0006650: glycerophospholipid metabolic process | 3.92E-04 |
| 31 | GO:0030187: melatonin biosynthetic process | 3.92E-04 |
| 32 | GO:0006432: phenylalanyl-tRNA aminoacylation | 3.92E-04 |
| 33 | GO:0018026: peptidyl-lysine monomethylation | 3.92E-04 |
| 34 | GO:0009637: response to blue light | 4.38E-04 |
| 35 | GO:0010114: response to red light | 6.06E-04 |
| 36 | GO:0005977: glycogen metabolic process | 6.40E-04 |
| 37 | GO:0046168: glycerol-3-phosphate catabolic process | 6.40E-04 |
| 38 | GO:0009405: pathogenesis | 6.40E-04 |
| 39 | GO:0006954: inflammatory response | 6.40E-04 |
| 40 | GO:0090391: granum assembly | 6.40E-04 |
| 41 | GO:0071492: cellular response to UV-A | 6.40E-04 |
| 42 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.39E-04 |
| 43 | GO:0061077: chaperone-mediated protein folding | 8.10E-04 |
| 44 | GO:0009658: chloroplast organization | 8.57E-04 |
| 45 | GO:0006020: inositol metabolic process | 9.13E-04 |
| 46 | GO:0006072: glycerol-3-phosphate metabolic process | 9.13E-04 |
| 47 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 9.13E-04 |
| 48 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 9.13E-04 |
| 49 | GO:0046739: transport of virus in multicellular host | 9.13E-04 |
| 50 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 9.13E-04 |
| 51 | GO:2001141: regulation of RNA biosynthetic process | 9.13E-04 |
| 52 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.13E-04 |
| 53 | GO:0071486: cellular response to high light intensity | 1.21E-03 |
| 54 | GO:0009765: photosynthesis, light harvesting | 1.21E-03 |
| 55 | GO:0006109: regulation of carbohydrate metabolic process | 1.21E-03 |
| 56 | GO:0015994: chlorophyll metabolic process | 1.21E-03 |
| 57 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.21E-03 |
| 58 | GO:0006021: inositol biosynthetic process | 1.21E-03 |
| 59 | GO:0010021: amylopectin biosynthetic process | 1.21E-03 |
| 60 | GO:0008654: phospholipid biosynthetic process | 1.50E-03 |
| 61 | GO:0016558: protein import into peroxisome matrix | 1.54E-03 |
| 62 | GO:0006564: L-serine biosynthetic process | 1.54E-03 |
| 63 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.54E-03 |
| 64 | GO:0031365: N-terminal protein amino acid modification | 1.54E-03 |
| 65 | GO:0010583: response to cyclopentenone | 1.70E-03 |
| 66 | GO:0042549: photosystem II stabilization | 1.89E-03 |
| 67 | GO:0046855: inositol phosphate dephosphorylation | 1.89E-03 |
| 68 | GO:0042793: transcription from plastid promoter | 1.89E-03 |
| 69 | GO:0009117: nucleotide metabolic process | 1.89E-03 |
| 70 | GO:1901259: chloroplast rRNA processing | 2.27E-03 |
| 71 | GO:0010189: vitamin E biosynthetic process | 2.27E-03 |
| 72 | GO:0010196: nonphotochemical quenching | 2.67E-03 |
| 73 | GO:0015995: chlorophyll biosynthetic process | 2.70E-03 |
| 74 | GO:0009231: riboflavin biosynthetic process | 3.09E-03 |
| 75 | GO:0016559: peroxisome fission | 3.09E-03 |
| 76 | GO:0009642: response to light intensity | 3.09E-03 |
| 77 | GO:0030091: protein repair | 3.09E-03 |
| 78 | GO:0032508: DNA duplex unwinding | 3.09E-03 |
| 79 | GO:2000070: regulation of response to water deprivation | 3.09E-03 |
| 80 | GO:0010218: response to far red light | 3.29E-03 |
| 81 | GO:0071482: cellular response to light stimulus | 3.54E-03 |
| 82 | GO:0015996: chlorophyll catabolic process | 3.54E-03 |
| 83 | GO:0007186: G-protein coupled receptor signaling pathway | 3.54E-03 |
| 84 | GO:0009657: plastid organization | 3.54E-03 |
| 85 | GO:0032544: plastid translation | 3.54E-03 |
| 86 | GO:0017004: cytochrome complex assembly | 3.54E-03 |
| 87 | GO:0010206: photosystem II repair | 4.00E-03 |
| 88 | GO:0006415: translational termination | 5.52E-03 |
| 89 | GO:0019684: photosynthesis, light reaction | 5.52E-03 |
| 90 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.52E-03 |
| 91 | GO:0009073: aromatic amino acid family biosynthetic process | 5.52E-03 |
| 92 | GO:0043085: positive regulation of catalytic activity | 5.52E-03 |
| 93 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.52E-03 |
| 94 | GO:0006352: DNA-templated transcription, initiation | 5.52E-03 |
| 95 | GO:0009793: embryo development ending in seed dormancy | 5.62E-03 |
| 96 | GO:0006790: sulfur compound metabolic process | 6.06E-03 |
| 97 | GO:0045037: protein import into chloroplast stroma | 6.06E-03 |
| 98 | GO:0006006: glucose metabolic process | 6.61E-03 |
| 99 | GO:0010020: chloroplast fission | 7.20E-03 |
| 100 | GO:0019253: reductive pentose-phosphate cycle | 7.20E-03 |
| 101 | GO:0055085: transmembrane transport | 7.31E-03 |
| 102 | GO:0019853: L-ascorbic acid biosynthetic process | 7.79E-03 |
| 103 | GO:0046854: phosphatidylinositol phosphorylation | 7.79E-03 |
| 104 | GO:0006863: purine nucleobase transport | 8.41E-03 |
| 105 | GO:0019953: sexual reproduction | 9.69E-03 |
| 106 | GO:0048511: rhythmic process | 1.03E-02 |
| 107 | GO:0019915: lipid storage | 1.03E-02 |
| 108 | GO:0048278: vesicle docking | 1.03E-02 |
| 109 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.10E-02 |
| 110 | GO:0006012: galactose metabolic process | 1.17E-02 |
| 111 | GO:0009561: megagametogenesis | 1.24E-02 |
| 112 | GO:0006662: glycerol ether metabolic process | 1.47E-02 |
| 113 | GO:0010182: sugar mediated signaling pathway | 1.47E-02 |
| 114 | GO:0048868: pollen tube development | 1.47E-02 |
| 115 | GO:0042752: regulation of circadian rhythm | 1.54E-02 |
| 116 | GO:0061025: membrane fusion | 1.54E-02 |
| 117 | GO:0019252: starch biosynthetic process | 1.62E-02 |
| 118 | GO:0010193: response to ozone | 1.70E-02 |
| 119 | GO:0006635: fatty acid beta-oxidation | 1.70E-02 |
| 120 | GO:0016032: viral process | 1.78E-02 |
| 121 | GO:0009567: double fertilization forming a zygote and endosperm | 1.95E-02 |
| 122 | GO:0009611: response to wounding | 2.16E-02 |
| 123 | GO:0006906: vesicle fusion | 2.39E-02 |
| 124 | GO:0042254: ribosome biogenesis | 2.56E-02 |
| 125 | GO:0006412: translation | 2.67E-02 |
| 126 | GO:0009817: defense response to fungus, incompatible interaction | 2.67E-02 |
| 127 | GO:0009853: photorespiration | 3.16E-02 |
| 128 | GO:0009867: jasmonic acid mediated signaling pathway | 3.16E-02 |
| 129 | GO:0034599: cellular response to oxidative stress | 3.27E-02 |
| 130 | GO:0006887: exocytosis | 3.58E-02 |
| 131 | GO:0051707: response to other organism | 3.79E-02 |
| 132 | GO:0009644: response to high light intensity | 4.01E-02 |
| 133 | GO:0031347: regulation of defense response | 4.34E-02 |
| 134 | GO:0006364: rRNA processing | 4.68E-02 |
| 135 | GO:0010224: response to UV-B | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 2 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 3 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 4 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 5 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 7 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 8 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 9 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 10 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 11 | GO:0016168: chlorophyll binding | 4.19E-07 |
| 12 | GO:0005528: FK506 binding | 7.00E-07 |
| 13 | GO:0043495: protein anchor | 2.30E-05 |
| 14 | GO:0022891: substrate-specific transmembrane transporter activity | 6.00E-05 |
| 15 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.41E-05 |
| 16 | GO:0019899: enzyme binding | 1.03E-04 |
| 17 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.73E-04 |
| 18 | GO:0042586: peptide deformylase activity | 1.73E-04 |
| 19 | GO:0019843: rRNA binding | 2.63E-04 |
| 20 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.92E-04 |
| 21 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.92E-04 |
| 22 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.92E-04 |
| 23 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.92E-04 |
| 24 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.92E-04 |
| 25 | GO:0030385: ferredoxin:thioredoxin reductase activity | 3.92E-04 |
| 26 | GO:0004826: phenylalanine-tRNA ligase activity | 3.92E-04 |
| 27 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.92E-04 |
| 28 | GO:0016630: protochlorophyllide reductase activity | 3.92E-04 |
| 29 | GO:0004829: threonine-tRNA ligase activity | 3.92E-04 |
| 30 | GO:0019156: isoamylase activity | 3.92E-04 |
| 31 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.92E-04 |
| 32 | GO:0047746: chlorophyllase activity | 3.92E-04 |
| 33 | GO:0031409: pigment binding | 6.07E-04 |
| 34 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.40E-04 |
| 35 | GO:0004751: ribose-5-phosphate isomerase activity | 6.40E-04 |
| 36 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.40E-04 |
| 37 | GO:0051287: NAD binding | 7.70E-04 |
| 38 | GO:0009041: uridylate kinase activity | 9.13E-04 |
| 39 | GO:0035529: NADH pyrophosphatase activity | 9.13E-04 |
| 40 | GO:0016149: translation release factor activity, codon specific | 9.13E-04 |
| 41 | GO:0001053: plastid sigma factor activity | 1.21E-03 |
| 42 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.21E-03 |
| 43 | GO:0008453: alanine-glyoxylate transaminase activity | 1.21E-03 |
| 44 | GO:0080032: methyl jasmonate esterase activity | 1.21E-03 |
| 45 | GO:0016987: sigma factor activity | 1.21E-03 |
| 46 | GO:0016279: protein-lysine N-methyltransferase activity | 1.21E-03 |
| 47 | GO:0003959: NADPH dehydrogenase activity | 1.54E-03 |
| 48 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.89E-03 |
| 49 | GO:0080030: methyl indole-3-acetate esterase activity | 1.89E-03 |
| 50 | GO:0042578: phosphoric ester hydrolase activity | 1.89E-03 |
| 51 | GO:0004556: alpha-amylase activity | 1.89E-03 |
| 52 | GO:0016462: pyrophosphatase activity | 1.89E-03 |
| 53 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.27E-03 |
| 54 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.27E-03 |
| 55 | GO:0004033: aldo-keto reductase (NADP) activity | 3.09E-03 |
| 56 | GO:0042802: identical protein binding | 3.68E-03 |
| 57 | GO:0003993: acid phosphatase activity | 3.95E-03 |
| 58 | GO:0003747: translation release factor activity | 4.00E-03 |
| 59 | GO:0008047: enzyme activator activity | 4.99E-03 |
| 60 | GO:0000049: tRNA binding | 6.06E-03 |
| 61 | GO:0031072: heat shock protein binding | 6.61E-03 |
| 62 | GO:0004857: enzyme inhibitor activity | 9.03E-03 |
| 63 | GO:0003714: transcription corepressor activity | 9.03E-03 |
| 64 | GO:0005345: purine nucleobase transmembrane transporter activity | 9.69E-03 |
| 65 | GO:0004176: ATP-dependent peptidase activity | 1.03E-02 |
| 66 | GO:0047134: protein-disulfide reductase activity | 1.32E-02 |
| 67 | GO:0008080: N-acetyltransferase activity | 1.47E-02 |
| 68 | GO:0004791: thioredoxin-disulfide reductase activity | 1.54E-02 |
| 69 | GO:0048038: quinone binding | 1.70E-02 |
| 70 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.87E-02 |
| 71 | GO:0016597: amino acid binding | 2.12E-02 |
| 72 | GO:0003746: translation elongation factor activity | 3.16E-02 |
| 73 | GO:0000149: SNARE binding | 3.37E-02 |
| 74 | GO:0050661: NADP binding | 3.47E-02 |
| 75 | GO:0005484: SNAP receptor activity | 3.79E-02 |
| 76 | GO:0003735: structural constituent of ribosome | 4.08E-02 |
| 77 | GO:0005509: calcium ion binding | 4.57E-02 |
| 78 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 3 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 1.02E-62 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.59E-31 |
| 6 | GO:0009570: chloroplast stroma | 7.01E-22 |
| 7 | GO:0009534: chloroplast thylakoid | 1.94E-19 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 3.95E-19 |
| 9 | GO:0009579: thylakoid | 2.64E-15 |
| 10 | GO:0009941: chloroplast envelope | 1.53E-12 |
| 11 | GO:0031977: thylakoid lumen | 1.82E-09 |
| 12 | GO:0009523: photosystem II | 1.05E-07 |
| 13 | GO:0030095: chloroplast photosystem II | 3.20E-07 |
| 14 | GO:0009538: photosystem I reaction center | 2.01E-06 |
| 15 | GO:0010287: plastoglobule | 2.19E-05 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 3.89E-05 |
| 17 | GO:0019898: extrinsic component of membrane | 1.21E-04 |
| 18 | GO:0031361: integral component of thylakoid membrane | 1.73E-04 |
| 19 | GO:0009515: granal stacked thylakoid | 1.73E-04 |
| 20 | GO:0042644: chloroplast nucleoid | 2.02E-04 |
| 21 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.92E-04 |
| 22 | GO:0009508: plastid chromosome | 4.32E-04 |
| 23 | GO:0009528: plastid inner membrane | 6.40E-04 |
| 24 | GO:0033281: TAT protein transport complex | 6.40E-04 |
| 25 | GO:0042651: thylakoid membrane | 7.39E-04 |
| 26 | GO:0042646: plastid nucleoid | 9.13E-04 |
| 27 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 9.13E-04 |
| 28 | GO:0031969: chloroplast membrane | 1.18E-03 |
| 29 | GO:0009527: plastid outer membrane | 1.21E-03 |
| 30 | GO:0009522: photosystem I | 1.40E-03 |
| 31 | GO:0009295: nucleoid | 2.05E-03 |
| 32 | GO:0009707: chloroplast outer membrane | 2.99E-03 |
| 33 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.00E-03 |
| 34 | GO:0005840: ribosome | 4.41E-03 |
| 35 | GO:0012511: monolayer-surrounded lipid storage body | 5.52E-03 |
| 36 | GO:0032040: small-subunit processome | 6.06E-03 |
| 37 | GO:0030076: light-harvesting complex | 7.79E-03 |
| 38 | GO:0015935: small ribosomal subunit | 1.03E-02 |
| 39 | GO:0009532: plastid stroma | 1.03E-02 |
| 40 | GO:0005759: mitochondrial matrix | 1.47E-02 |
| 41 | GO:0009504: cell plate | 1.62E-02 |
| 42 | GO:0010319: stromule | 2.04E-02 |
| 43 | GO:0005778: peroxisomal membrane | 2.04E-02 |
| 44 | GO:0015934: large ribosomal subunit | 2.96E-02 |
| 45 | GO:0031201: SNARE complex | 3.58E-02 |